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Dive into the research topics where Shah R. Ali is active.

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Featured researches published by Shah R. Ali.


Circulation Research | 2014

Developmental Heterogeneity of Cardiac Fibroblasts Does Not Predict Pathological Proliferation and Activation

Shah R. Ali; Sara Ranjbarvaziri; Mahmood Talkhabi; Peng Zhao; Ali Subat; Armin Hojjat; Paniz Kamran; Antonia M. S. Müller; Katharina S Volz; Zhaoyi Tang; Kristy Red-Horse; Reza Ardehali

Rationale: Fibrosis is mediated partly by extracellular matrix–depositing fibroblasts in the heart. Although these mesenchymal cells are reported to have multiple embryonic origins, the functional consequence of this heterogeneity is unknown. Objective: We sought to validate a panel of surface markers to prospectively identify cardiac fibroblasts. We elucidated the developmental origins of cardiac fibroblasts and characterized their corresponding phenotypes. We also determined proliferation rates of each developmental subset of fibroblasts after pressure overload injury. Methods and Results: We showed that Thy1+CD45−CD31−CD11b−Ter119− cells constitute the majority of cardiac fibroblasts. We characterized these cells using flow cytometry, epifluorescence and confocal microscopy, and transcriptional profiling (using reverse transcription polymerase chain reaction and RNA-seq). We used lineage tracing, transplantation studies, and parabiosis to show that most adult cardiac fibroblasts derive from the epicardium, a minority arises from endothelial cells, and a small fraction from Pax3-expressing cells. We did not detect generation of cardiac fibroblasts by bone marrow or circulating cells. Interestingly, proliferation rates of fibroblast subsets on injury were identical, and the relative abundance of each lineage remained the same after injury. The anatomic distribution of fibroblast lineages also remained unchanged after pressure overload. Furthermore, RNA-seq analysis demonstrated that Tie2-derived and Tbx18-derived fibroblasts within each operation group exhibit similar gene expression profiles. Conclusions: The cellular expansion of cardiac fibroblasts after transaortic constriction surgery was not restricted to any single developmental subset. The parallel proliferation and activation of a heterogeneous population of fibroblasts on pressure overload could suggest that common signaling mechanisms stimulate their pathological response.


Proceedings of the National Academy of Sciences of the United States of America | 2014

Existing cardiomyocytes generate cardiomyocytes at a low rate after birth in mice

Shah R. Ali; Simon Hippenmeyer; Lily V. Saadat; Liqun Luo; Irving L. Weissman; Reza Ardehali

Significance The nature of postnatal cardiomyogenesis in mammals remains in dispute. Here, we provide cell-level evidence for the birth of cardiomyocytes in newborn and adult mice. Our clonal analysis, based on the mosaic analysis with double markers mouse model, shows that cardiomyocytes are the parent cell of origin of cardiomyocytes that are generated postnatally. Our findings confirm that limited, symmetric division of cardiomyocytes is a rare phenomenon in the mouse heart after birth. The mammalian heart has long been considered a postmitotic organ, implying that the total number of cardiomyocytes is set at birth. Analysis of cell division in the mammalian heart is complicated by cardiomyocyte binucleation shortly after birth, which makes it challenging to interpret traditional assays of cell turnover [Laflamme MA, Murray CE (2011) Nature 473(7347):326–335; Bergmann O, et al. (2009) Science 324(5923):98–102]. An elegant multi-isotope imaging-mass spectrometry technique recently calculated the low, discrete rate of cardiomyocyte generation in mice [Senyo SE, et al. (2013) Nature 493(7432):433–436], yet our cellular-level understanding of postnatal cardiomyogenesis remains limited. Herein, we provide a new line of evidence for the differentiated α-myosin heavy chain-expressing cardiomyocyte as the cell of origin of postnatal cardiomyogenesis using the “mosaic analysis with double markers” mouse model. We show limited, life-long, symmetric division of cardiomyocytes as a rare event that is evident in utero but significantly diminishes after the first month of life in mice; daughter cardiomyocytes divide very seldom, which this study is the first to demonstrate, to our knowledge. Furthermore, ligation of the left anterior descending coronary artery, which causes a myocardial infarction in the mosaic analysis with double-marker mice, did not increase the rate of cardiomyocyte division above the basal level for up to 4 wk after the injury. The clonal analysis described here provides direct evidence of postnatal mammalian cardiomyogenesis.


Proceedings of the National Academy of Sciences of the United States of America | 2011

Overexpression of BCL2 enhances survival of human embryonic stem cells during stress and obviates the requirement for serum factors

Reza Ardehali; Matthew A. Inlay; Shah R. Ali; Chad Tang; Micha Drukker; Irving L. Weissman

The promise of pluripotent stem cells as a research and therapeutic tool is partly undermined by the technical challenges of generating and maintaining these cells in culture. Human embryonic stem cells (hESCs) are exquisitely sensitive to culture conditions, and require constant signaling by growth factors and cell–cell and cell–matrix interactions to prevent apoptosis, senescence, and differentiation. Previous work from our laboratory demonstrated that overexpression of the prosurvival gene BCL2 in mouse embryonic stem cells overrode the requirement of serum factors and feeder cells to maintain mESCs in culture. To determine whether this prosurvival gene could similarly protect hESCs, we generated hESC lines that constitutively or inducibly express BCL2. We find that BCL2 overexpression significantly decreases dissociation-induced apoptosis, resulting in enhanced colony formation from sorted single cells, and enhanced embryoid body formation. In addition, BCL2-hESCs exhibit normal growth in the absence of serum, but require basic fibroblast growth factor to remain undifferentiated. Furthermore, they maintain their pluripotency markers, form teratomas in vivo, and differentiate into all three germ layers. Our data suggest that the BCL2 signaling pathway plays an important role in inhibiting hESC apoptosis, such that its overexpression in hESCs offers both a survival benefit in conditions of stress by resisting apoptosis and obviates the requirement for serum or a feeder layer for maintenance.


Proceedings of the National Academy of Sciences of the United States of America | 2013

Prospective isolation of human embryonic stem cell-derived cardiovascular progenitors that integrate into human fetal heart tissue

Reza Ardehali; Shah R. Ali; Matthew A. Inlay; Oscar J. Abilez; Michael Q. Chen; Timothy A. Blauwkamp; Masayuki Yazawa; Yongquan Gong; Roel Nusse; Micha Drukker; Irving L. Weissman

A goal of regenerative medicine is to identify cardiovascular progenitors from human ES cells (hESCs) that can functionally integrate into the human heart. Previous studies to evaluate the developmental potential of candidate hESC-derived progenitors have delivered these cells into murine and porcine cardiac tissue, with inconclusive evidence regarding the capacity of these human cells to physiologically engraft in xenotransplantation assays. Further, the potential of hESC-derived cardiovascular lineage cells to functionally couple to human myocardium remains untested and unknown. Here, we have prospectively identified a population of hESC-derived ROR2+/CD13+/KDR+/PDGFRα+ cells that give rise to cardiomyocytes, endothelial cells, and vascular smooth muscle cells in vitro at a clonal level. We observed rare clusters of ROR2+ cells and diffuse expression of KDR and PDGFRα in first-trimester human fetal hearts. We then developed an in vivo transplantation model by transplanting second-trimester human fetal heart tissues s.c. into the ear pinna of a SCID mouse. ROR2+/CD13+/KDR+/PDGFRα+ cells were delivered into these functioning fetal heart tissues: in contrast to traditional murine heart models for cell transplantation, we show structural and functional integration of hESC-derived cardiovascular progenitors into human heart.


Cell Cycle | 2011

Enhanced survival of pluripotent stem cells under stressful conditions

Reza Ardehali; Shah R. Ali; Matthew A. Inlay; Adriane R. Mosley; Irving L. Weissman

Comment on: Ardehali R, et al. Proc Natl Acad Sci USA. 2011; 108:3282-7.


Circulation Research | 2013

Abstract 173: Clonal Analysis Reveals Limited Proliferative Capacity of Mature Cardiomyocytes during Embryonic Development.

Konstantina-Ioanna Sereti; Paniz Kamran; Shah R. Ali; Josh Z Lee; Ali Subat; Humberto Contreras-Trujillo; Peng Zhao; Reza Ardehali


Circulation Research | 2013

Abstract 174: The Origin Of Cardiac Fibroblasts During Normal Development And After Injury

Sara Ranjbarvaziri; Shah R. Ali; Mahmood Talkhabi; Ali Subat; Peng Zhao; Katharina S Volz; Kristy Red-Horse; Reza Ardehali


Circulation | 2013

Abstract 19048: Clonal Analysis of Cardiac Tissue Formation Reveals Limited Proliferative Capacity of Mature Cardiomyocytes During Development

Paniz Kamran; Konstantina Ioanna Sereti; Shah R. Ali; Ali Subat; Humberto Contreras-Trujillo H; Peng Zhao; Nicholas Wisniewski; Alan Garfinkel; Reza Ardehali


Circulation | 2013

Abstract 19111: Multipotent Mesp1 Progenitors Contribute to a Population of Cardiac Fibroblasts During Development and After Injury

Sara Ranjbarvaziri; Shah R. Ali; Mahmood Talkhabi; Ali Subat; Peng Zhao; Reza Ardehali


Circulation Research | 2012

Abstract 45: Cardiomyocytes Undergo Division Postnatally to Generate New Cardiomyocytes in Mouse Models of Aging and Cardiac Injury

Shah R. Ali; Lily S Saadat; Simon Hippenmeyer; Liqun Luo; Irving L. Weissman; Reza Ardehali

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Reza Ardehali

University of California

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Ali Subat

University of California

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Peng Zhao

University of California

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Liqun Luo

Howard Hughes Medical Institute

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Paniz Kamran

University of California

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