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Dive into the research topics where Shawn Zinnen is active.

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Featured researches published by Shawn Zinnen.


Nature Biotechnology | 2005

Potent and persistent in vivo anti-HBV activity of chemically modified siRNAs

David Morrissey; Jennifer A. Lockridge; Lucinda Shaw; Karin Blanchard; Kristi Jensen; Wendy Breen; Kimberly Hartsough; Lynn Machemer; Susan Radka; Vasant Jadhav; Narendra Vaish; Shawn Zinnen; Chandra Vargeese; Keith Bowman; Chris S. Shaffer; Lloyd Jeffs; Adam Judge; Ian Maclachlan; Barry Polisky

The efficacy of lipid-encapsulated, chemically modified short interfering RNA (siRNA) targeted to hepatitis B virus (HBV) was examined in an in vivo mouse model of HBV replication. Stabilized siRNA targeted to the HBV RNA was incorporated into a specialized liposome to form a stable nucleic-acid-lipid particle (SNALP) and administered by intravenous injection into mice carrying replicating HBV. The improved efficacy of siRNA-SNALP compared to unformulated siRNA correlates with a longer half-life in plasma and liver. Three daily intravenous injections of 3 mg/kg/day reduced serum HBV DNA >1.0 log10. The reduction in HBV DNA was specific, dose-dependent and lasted for up to 7 d after dosing. Furthermore, reductions were seen in serum HBV DNA for up to 6 weeks with weekly dosing. The advances demonstrated here, including persistence of in vivo activity, use of lower doses and reduced dosing frequency are important steps in making siRNA a clinically viable therapeutic approach.


Hepatology | 2005

Activity of stabilized short interfering RNA in a mouse model of hepatitis B virus replication

David Morrissey; Karin Blanchard; Lucinda Shaw; Kristi Jensen; Jennifer A. Lockridge; Brent Dickinson; James McSwiggen; Chandra Vargeese; Keith Bowman; Chris S. Shaffer; Barry Polisky; Shawn Zinnen

To develop synthetic short interfering RNA (siRNA) molecules as therapeutic agents for systemic administration in vivo, chemical modifications were introduced into siRNAs targeted to conserved sites in hepatitis B virus (HBV) RNA. These modifications conferred significantly prolonged stability in human serum compared with unmodified siRNAs. Cell culture studies revealed a high degree of gene silencing after treatment with the chemically modified siRNAs. To assess activity of the stabilized siRNAs in vivo initially, an HBV vector‐based model was used in which the siRNA and the HBV vector were codelivered via high‐volume tail vein injection. More than a 3 log10 decrease in levels of serum HBV DNA and hepatitis B surface antigen, as well as liver HBV RNA, were observed in the siRNA‐treated groups compared with the control siRNA‐treated and saline groups. Furthermore, the observed decrease in serum HBV DNA was 1.5 log10 more with stabilized siRNA compared with unmodified siRNA, indicating the value of chemical modification in therapeutic applications of siRNA. In subsequent experiments, standard systemic intravenous dosing of stabilized siRNA 72 hours after injection of the HBV vector resulted a 0.9 log10 reduction of serum HBV DNA levels after 2 days of dosing. In conclusion, these experiments establish the strong impact that siRNAs can have on the extent of HBV infection and underscore the importance of stabilization of siRNA against nuclease degradation. (HEPATOLOGY 2005.)


PLOS ONE | 2014

Development of pre-clinical models for evaluating the therapeutic potential of candidate siRNA targeting STAT6.

Gareth D. Healey; Jennifer A. Lockridge; Shawn Zinnen; Julian M. Hopkin; Ivan Richards; William Walker

Developing siRNA therapeutics poses technical challenges including appropriate molecular design and testing in suitable pre-clinical models. We previously detailed sequence-selection and modification strategies for siRNA candidates targeting STAT6. Here, we describe methodology that evaluates the suitability of candidate siRNA for respiratory administration. Chemically-modified siRNA exhibited similar inhibitory activity (IC50) against STAT6 in vitro compared to unmodified siRNA and apical exposure testing with Caco-2 cell monolayers showed modification was not associated with cellular toxicity. Use of a modified RNA extraction protocol improved the sensitivity of a PCR-based bio-analytical assay (lower limit of siRNA strand quantification  =  0.01 pg/µl) which was used to demonstrate that lung distribution profiles for both siRNAs were similar following intra-tracheal administration. However, after 6 hours, modified siRNA was detected in lung tissue at concentrations >1000-fold higher than unmodified siRNA. Evaluation in a rat model of allergic inflammation confirmed the persistence of modified siRNA in vivo, which was detectable in broncho-alveolar lavage (BAL) fluid, BAL cells and lung tissue samples, 72 hours after dosing. Based upon the concept of respiratory allergy as a single airway disease, we considered nasal delivery as a route for respiratory targeting, evaluating an intra-nasal exposure model that involved simple dosing followed by fine dissection of the nasal cavity. Notably, endogenous STAT6 expression was invariant throughout the nasal cavities and modified siRNA persisted for at least 3 days after administration. Coupled with our previous findings showing upregulated expression of inflammatory markers in nasal samples from asthmatics, these findings support the potential of intranasal siRNA delivery. In summary, we demonstrate the successful chemical modification of STAT6 targeting siRNA, which enhanced bio-availability without cellular toxicity or reduced efficacy. We have established a robust, sensitive method for determining siRNA bio-distribution in vivo, and developed a nasal model to aid evaluation. Further work is warranted.


Bone reports | 2018

Bisphosphonate conjugation for bone specific drug targeting.

Kristen B. Farrell; Alexander Karpeisky; Douglas H. Thamm; Shawn Zinnen

Bones provide essential functions and are sites of unique biochemistry and specialized cells, but can also be sites of disease. The treatment of bone disorders and neoplasia has presented difficulties in the past, and improved delivery of drugs to bone remains an important goal for achieving effective treatments. Drug targeting strategies have improved drug localization to bone by taking advantage of the high mineral concentration unique to the bone hydroxyapatite matrix, as well as tissue-specific cell types. The bisphosphonate molecule class binds specifically to hydroxyapatite and inhibits osteoclast resorption of bone, providing direct treatment for degenerative bone disorders, and as emerging evidence suggests, cancer. These bone-binding molecules also provide the opportunity to deliver other drugs specifically to bone by bisphosphonate conjugation. Bisphosphonate bone-targeted therapies have been successful in treatment of osteoporosis, primary and metastatic neoplasms of the bone, and other bone disorders, as well as refining bone imaging. In this review, we focus upon the use of bisphosphonate conjugates with antineoplastic agents, and overview bisphosphonate based imaging agents, nanoparticles, and other drugs. We also discuss linker design potential and the current state of bisphosphonate conjugate research progress. Ongoing investigations continue to expand the possibilities for bone-targeted therapeutics and for extending their reach into clinical practice.


Archive | 2003

Rna interference by modified short interfering nucleic acid

James Mcswiggen; Leonid Beigelman; Dennis Macejak; Shawn Zinnen; Pamela Pavco; David Morrissey; Kathy Fosnaugh; Victor Mokler; Sharon Jamison


Archive | 1999

Oligoribonucleotides with enzymatic activity

Leonid Beigelman; Alex B. Burgin; Amber Beaudry; Alexander Karpeisky; Jasenka Matulic-Adamic; David Sweedler; Shawn Zinnen


Archive | 1999

Synthetic ribonucleic acids with RNAse activity

Leonid Beigelman; Alex B. Burgin; Amber Beaudry; Alexander Karpeisky; Jasenka Matulic-Adamic; David Sweedler; Shawn Zinnen


Archive | 1999

Nucleoside triphosphates and their incorporation into oligonucleotides

Leonid Beigelman; Alex B. Burgin; Amber Beaudry; Alexander Karpeisky; Jasenka Matulic-Adamic; David Sweedler; Shawn Zinnen


Archive | 2000

Nucleic acid based modulators of gene expression

James Mcswiggen; Nassim Usman; Lawrence Blatt; Leonid Beigelman; Alex B. Burgin; Alexander Karpeisky; Jasenka Matulic-Adamic; David Sweedler; Kenneth G. Draper; Bharat Chowrira; Dan T. Stinchcomb; Amber Beaudry; Shawn Zinnen; Janos Lugwig; Brian S. Sproat


Archive | 1999

Nucleoside triphosphates and their incorporation into ribozymes

Leonid Beigelman; Alex B. Burgin; Amber Beaudry; Alexander Karpeisky; Jasenka Matulic-Adamic; David Sweedler; Shawn Zinnen

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