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Dive into the research topics where Sheila A. Baker is active.

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Featured researches published by Sheila A. Baker.


Journal of Cell Biology | 2002

The intraflagellar transport protein, IFT88, is essential for vertebrate photoreceptor assembly and maintenance

Gregory J. Pazour; Sheila A. Baker; James A. Deane; Douglas G. Cole; Bethany L. Dickert; Joel L. Rosenbaum; George B. Witman; Joseph C. Besharse

Approximately 10% of the photoreceptor outer segment (OS) is turned over each day, requiring large amounts of lipid and protein to be moved from the inner segment to the OS. Defects in intraphotoreceptor transport can lead to retinal degeneration and blindness. The transport mechanisms are unknown, but because the OS is a modified cilium, intraflagellar transport (IFT) is a candidate mechanism. IFT involves movement of large protein complexes along ciliary microtubules and is required for assembly and maintenance of cilia. We show that IFT particle proteins are localized to photoreceptor connecting cilia. We further find that mice with a mutation in the IFT particle protein gene, Tg737/IFT88, have abnormal OS development and retinal degeneration. Thus, IFT is important for assembly and maintenance of the vertebrate OS.


Journal of Biological Chemistry | 2003

IFT20 Links Kinesin II with a Mammalian Intraflagellar Transport Complex That Is Conserved in Motile Flagella and Sensory Cilia

Sheila A. Baker; K. Freeman; Katherine Luby-Phelps; Gregory J. Pazour; Joseph C. Besharse

Intraflagellar transport (IFT) is an evolutionarily conserved mechanism thought to be required for the assembly and maintenance of all eukaryotic cilia and flagella. Although IFT proteins are present in cells with sensory cilia, the organization of IFT protein complexes in those cells has not been analyzed. To determine whether the IFT complex is conserved in the sensory cilia of photo-receptors, we investigated protein interactions among four mammalian IFT proteins: IFT88/Polaris, IFT57/Hippi, IFT52/NGD5, and IFT20. We demonstrate that IFT proteins extracted from bovine photoreceptor outer segments, a modified sensory cilium, co-fractionate at ∼17 S, similar to IFT proteins extracted from mouse testis. Using antibodies to IFT88 and IFT57, we demonstrate that all four IFT proteins co-immunoprecipitate from lysates of mouse testis, kidney, and retina. We also extended our analysis to interactions outside of the IFT complex and demonstrate an ATP-regulated co-immunoprecipitation of heterotrimeric kinesin II with the IFT complex. The internal architecture of the IFT complex was investigated using the yeast two-hybrid system. IFT20 exhibited a strong interaction with IFT57/Hippi and the kinesin II subunit, KIF3B. Our data indicate that all four mammalian IFT proteins are part of a highly conserved complex in multiple ciliated cell types. Furthermore, IFT20 appears to bridge kinesin II with the IFT complex.


Progress in Retinal and Eye Research | 2013

Protein sorting, targeting and trafficking in photoreceptor cells

Jillian N. Pearring; Raquel Y. Salinas; Sheila A. Baker; Vadim Y. Arshavsky

Vision is the most fundamental of our senses initiated when photons are absorbed by the rod and cone photoreceptor neurons of the retina. At the distal end of each photoreceptor resides a light-sensing organelle, called the outer segment, which is a modified primary cilium highly enriched with proteins involved in visual signal transduction. At the proximal end, each photoreceptor has a synaptic terminal, which connects this cell to the downstream neurons for further processing of the visual information. Understanding the mechanisms involved in creating and maintaining functional compartmentalization of photoreceptor cells remains among the most fascinating topics in ocular cell biology. This review will discuss how photoreceptor compartmentalization is supported by protein sorting, targeting and trafficking, with an emphasis on the best-studied cases of outer segment-resident proteins.


Science | 2009

Ankyrin-G promotes cyclic nucleotide-gated channel transport to rod photoreceptor sensory cilia.

Krishnakumar Kizhatil; Sheila A. Baker; Vadim Y. Arshavsky; Vann Bennett

Cyclic nucleotide–gated (CNG) channels localize exclusively to the plasma membrane of photosensitive outer segments of rod photoreceptors where they generate the electrical response to light. Here, we report the finding that targeting of CNG channels to the rod outer segment required their interaction with ankyrin-G. Ankyrin-G localized exclusively to rod outer segments, coimmunoprecipitated with the CNG channel, and bound to the C-terminal domain of the channel β1 subunit. Ankyrin-G depletion in neonatal mouse retinas markedly reduced CNG channel expression. Transgenic expression of CNG channel β-subunit mutants in Xenopus rods showed that ankyrin-G binding was necessary and sufficient for targeting of the β1 subunit to outer segments. Thus, ankyrin-G is required for transport of CNG channels to the plasma membrane of rod outer segments.


Traffic | 2009

Photoreceptor IFT Complexes Containing Chaperones, Guanylyl Cyclase 1 and Rhodopsin

Reshma Bhowmick; Mei Li; Jun Sun; Sheila A. Baker; Christine Insinna; Joseph C. Besharse

Intraflagellar transport (IFT) provides a mechanism for the transport of cilium‐specific proteins, but the mechanisms for linkage of cargo and IFT proteins have not been identified. Using the sensory outer segments (OS) of photoreceptors, which are derived from sensory cilia, we have identified IFT–cargo complexes containing IFT proteins, kinesin 2 family proteins, two photoreceptor‐specific membrane proteins, guanylyl cyclase 1 (GC1, Gucy2e) and rhodopsin (RHO), and the chaperones, mammalian relative of DNAJ, DnajB6 (MRJ), and HSC70 (Hspa8). Analysis of these complexes leads to a model in which MRJ through its binding to IFT88 and GC1 plays a critical role in formation or stabilization of the IFT–cargo complexes. Consistent with the function of MRJ in the activation of HSC70 ATPase activity, Mg‐ATP enhances the co‐IP of GC1, RHO, and MRJ with IFT proteins. Furthermore, RNAi knockdown of MRJ in IMCD3 cells expressing GC1‐green fluorescent protein (GFP) reduces cilium membrane targeting of GC1‐GFP without apparent effect on cilium elongation.


Archive | 2003

Photoreceptor Intersegmental Transport and Retinal Degeneration

Joseph C. Besharse; Sheila A. Baker; Katherine Luby-Phelps; Gregory J. Pazour

During early development of rod and cone photoreceptors, the outer segment (OS) assembles on the apical cell surface by an elaborate process of membrane and protein transport followed by membrane reorganization to form the highly organized stack of membrane disks found in the OS of mature cells. The process of membrane and protein transport continues in mature photoreceptors as the molecular components of the OS turnover at a prodigious rate for the life of the cell (Young, 1967). Intersegmental transport between the inner segment (IS) and the OS is a major logistical problem as all OS macromolecules are synthesized in the IS and must be transported to the OS. Elucidating the molecular pathways involved in intersegmental transport will ultimately require a refined understanding of the photoreceptor connecting cilium as this structure is the only stable connecting link between the IS and the OS and is the likely transport corridor (reviewed in Besharse and Horst, 1990). In addition, understanding the details of these pathways is likely to provide an improved understanding of photoreceptor degeneration diseases that involve trafficking between the two segments. Like all other cilia, photoreceptor cilia have a microtubule based cytoskeleton called the axoneme, which is templated from a basal body (Horst, et al., 1990). In the region of the connecting cilium, the axoneme has a 9+0 configuration of microtubules that corresponds anatomically to the transition zone of other cilia and flagella (Rohlich, 1975). Beyond the connecting cilium, the axoneme loses it stereotypical 9+0 organization. However the microtubules extend for some distance into the outer segment.


Vision Research | 2008

Spatial Distribution of Intraflagellar Transport Proteins in Vertebrate Photoreceptors

Katherine Luby-Phelps; Joseph Fogerty; Sheila A. Baker; Gregory J. Pazour; Joseph C. Besharse

Intraflagellar transport (IFT) of a approximately 17S particle containing at least 16 distinct polypeptides is required for the assembly and maintenance of cilia and flagella. Although both genetic and biochemical evidence suggest a role for IFT in vertebrate photoreceptors, the spatial distribution of IFT proteins within photoreceptors remains poorly defined. We have evaluated the distribution of 4 IFT proteins using a combination of immunocytochemistry and rod-specific overexpression of GFP tagged IFT proteins. Endogenous IFT proteins are most highly concentrated within the inner segment, around the basal body, and within the outer segment IFT proteins are localized in discrete particles along the entire length of the axoneme. IFT52-GFP and IFT57-GFP mimicked this pattern in transgenic Xenopus.


Channels | 2013

Dysregulation of Cav1.4 channels disrupts the maturation of photoreceptor synaptic ribbons in congenital stationary night blindness type 2

Xiaoni Liu; Vasily Kerov; Françoise Haeseleer; Anurima Majumder; Nikolai O. Artemyev; Sheila A. Baker; Amy Lee

Mutations in the gene encoding Cav1.4, CACNA1F, are associated with visual disorders including X-linked incomplete congenital stationary night blindness type 2 (CSNB2). In mice lacking Cav1.4 channels, there are defects in the development of “ribbon” synapses formed between photoreceptors (PRs) and second-order neurons. However, many CSNB2 mutations disrupt the function rather than expression of Cav1.4 channels. Whether defects in PR synapse development due to altered Cav1.4 function are common features contributing to the pathogenesis of CSNB2 is unknown. To resolve this issue, we profiled changes in the subcellular distribution of Cav1.4 channels and synapse morphology during development in wild-type (WT) mice and mouse models of CSNB2. Using Cav1.4-selective antibodies, we found that Cav1.4 channels associate with ribbon precursors early in development and are concentrated at both rod and cone PR synapses in the mature retina. In mouse models of CSNB2 in which the voltage-dependence of Cav1.4 activation is either enhanced (Cav1.4I756T) or inhibited (CaBP4 KO), the initial stages of PR synaptic ribbon formation are largely unaffected. However, after postnatal day 13, many PR ribbons retain the immature morphology. This synaptic abnormality corresponds in severity to the defect in synaptic transmission in the adult mutant mice, suggesting that lack of sufficient mature synapses contributes to vision impairment in Cav1.4I756T and CaBP4 KO mice. Our results demonstrate the importance of proper Cav1.4 function for efficient PR synapse maturation, and that dysregulation of Cav1.4 channels in CSNB2 may have synaptopathic consequences.


Journal of Cell Science | 2010

Facilitative glucose transporter Glut1 is actively excluded from rod outer segments

Sidney M. Gospe; Sheila A. Baker; Vadim Y. Arshavsky

Photoreceptors are among the most metabolically active cells in the body, relying on both oxidative phosphorylation and glycolysis to satisfy their high energy needs. Local glycolysis is thought to be particularly crucial in supporting the function of the photoreceptors light-sensitive outer segment compartment, which is devoid of mitochondria. Accordingly, it has been commonly accepted that the facilitative glucose transporter Glut1 responsible for glucose entry into photoreceptors is localized in part to the outer segment plasma membrane. However, we now demonstrate that Glut1 is entirely absent from the rod outer segment and is actively excluded from this compartment by targeting information present in its cytosolic C-terminal tail. Our data indicate that glucose metabolized in the outer segment must first enter through other parts of the photoreceptor cell. Consequently, the entire energy supply of the outer segment is dependent on diffusion of energy-rich substrates through the thin connecting cilium that links this compartment to the rest of the cell.


Neuron | 2015

Mechanism for Selective Synaptic Wiring of Rod Photoreceptors into the Retinal Circuitry and Its Role in Vision

Yan Cao; Ignacio Sarria; Katherine E. Fehlhaber; Naomi Kamasawa; Cesare Orlandi; Kiely N. James; Jennifer L. Hazen; Matthew R. Gardner; Michael Farzan; Amy Lee; Sheila A. Baker; Kristin K. Baldwin; Alapakkam P. Sampath; Kirill A. Martemyanov

In the retina, rod and cone photoreceptors form distinct connections with different classes of downstream bipolar cells. However, the molecular mechanisms responsible for their selective connectivity are unknown. Here we identify a cell-adhesion protein, ELFN1, to be essential for the formation of synapses between rods and rod ON-bipolar cells in the primary rod pathway. ELFN1 is expressed selectively in rods where it is targeted to the axonal terminals by the synaptic release machinery. At the synapse, ELFN1 binds in trans to mGluR6, the postsynaptic receptor on rod ON-bipolar cells. Elimination of ELFN1 in mice prevents the formation of synaptic contacts involving rods, but not cones, allowing a dissection of the contributions of primary and secondary rod pathways to retinal circuit function and vision. We conclude that ELFN1 is necessary for the selective wiring of rods into the primary rod pathway and is required for high sensitivity of vision.

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Joseph G. Laird

Roy J. and Lucille A. Carver College of Medicine

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Gregory J. Pazour

University of Massachusetts Medical School

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Joseph C. Besharse

Medical College of Wisconsin

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Yuan Pan

Roy J. and Lucille A. Carver College of Medicine

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Amy Lee

Roy J. and Lucille A. Carver College of Medicine

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David M. Yamaguchi

Roy J. and Lucille A. Carver College of Medicine

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Katherine Luby-Phelps

University of Texas Southwestern Medical Center

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