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Dive into the research topics where Shun Araki is active.

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Featured researches published by Shun Araki.


Scientific Reports | 2017

Mechanically stable solvent-free lipid bilayers in nano- and micro-tapered apertures for reconstitution of cell-free synthesized hERG channels

Daisuke Tadaki; Daichi Yamaura; Shun Araki; Miyu Yoshida; Kohei Arata; Takeshi Ohori; Kenichi Ishibashi; Miki Kato; Teng Ma; Ryusuke Miyata; Yuzuru Tozawa; Hideaki Yamamoto; Michio Niwano; Ayumi Hirano-Iwata

The self-assembled bilayer lipid membrane (BLM) is the basic component of the cell membrane. The reconstitution of ion channel proteins in artificially formed BLMs represents a well-defined system for the functional analysis of ion channels and screening the effects of drugs that act on them. However, because BLMs are unstable, this limits the experimental throughput of BLM reconstitution systems. Here we report on the formation of mechanically stable solvent-free BLMs in microfabricated apertures with defined nano- and micro-tapered edge structures. The role of such nano- and micro-tapered structures on the stability of the BLMs was also investigated. Finally, this BLM system was combined with a cell-free synthesized human ether-a-go-go-related gene channel, a cardiac potassium channel whose relation to arrhythmic side effects following drug treatment is well recognized. Such stable BLMs as these, when combined with a cell-free system, represent a potential platform for screening the effects of drugs that act on various ion-channel genotypes.


Langmuir | 2018

Amphiphobic Septa Enhance the Mechanical Stability of Free-Standing Bilayer Lipid Membranes

Daichi Yamaura; Daisuke Tadaki; Shun Araki; Miyu Yoshida; Kohei Arata; Takeshi Ohori; Kenichi Ishibashi; Miki Kato; Teng Ma; Ryusuke Miyata; Hideaki Yamamoto; Ryugo Tero; Masao Sakuraba; Toshio Ogino; Michio Niwano; Ayumi Hirano-Iwata

Artificial bilayer lipid membranes (BLMs) provide well-defined systems for investigating the fundamental properties of membrane proteins, including ion channels, and for screening the effect of drugs that act on them. However, the application of this technique is limited due to the low stability and low reconstitution efficiency of the process. We previously reported on improving the stability of BLM based on the fabrication of microapertures having a tapered edge in SiO2/Si3N4 septa and efficient ion channel incorporation based on vesicle fusion accelerated by a centrifugal force. Although the BLM stability and incorporation probability were dramatically improved when these approaches were used, some BLMs were ruptured when subjected to a centrifugal force. To further improve the BLM stability, we investigated the effect of modifying the surface of the SiO2/Si3N4 septa on the stability of BLM suspended in the septa. The modified surfaces were characterized in terms of hydrophobicity, lipophobicity, and surface roughness. Diffusion coefficients of the lipid monolayers formed on the modified surfaces were also determined. Highly fluidic lipid monolayers were formed on the amphiphobic substrates that had been modified with long-chain perfluorocarbons. Free-standing BLMs formed in amphiphobic septa showed a much higher mechanical stability, including tolerance to water movement and applied centrifugal forces with and without proteoliposomes, than those formed in the septa that had been modified with a short alkyl chain. These results demonstrate that highly stable BLMs are formed when the surface of the septa has amphiphobic properties. Because highly fluidic lipid monolayers that are formed on the septa seamlessly connect with BLMs in a free-standing region, the high fluidity of the lipids contributes to decreasing potential damage to BLMs when mechanical stresses are applied. This approach to improve the BLM stability increases the experimental efficiency of the BLM systems and will contribute to the development of high-throughput platforms for functional assays of ion channel proteins.


Biophysical Journal | 2016

Reconstitution of Human Ion Channels into Solvent-free Lipid Bilayers Enhanced by Centrifugal Forces

Ayumi Hirano-Iwata; Yutaka Ishinari; Miyu Yoshida; Shun Araki; Daisuke Tadaki; Ryusuke Miyata; Ken-ichi Ishibashi; Hideaki Yamamoto; Yasuo Kimura; Michio Niwano


The Japan Society of Applied Physics | 2017

Recording Ion-Channel Currents at Artificial Lipid Bilayers Formed in Microfabricated Silicon Chips

Kohei Arata; Ayumi Hirano-Iwata; Daisuke Tadaki; Daichi Yamaura; Shun Araki; Miyu Yoshida; Takeshi Ohori; Hideaki Yamamoto; Michio Niwano


The Japan Society of Applied Physics | 2017

Optimization of edge structures of micro-apertures fabricated in semiconductor silicon chips for formation of stable artificial bilayer lipid membranes

Daisuke Tadaki; Ayumi Hirano-Iwata; Daichi Yamaura; Shun Araki; Miyu Yoshida; Kohei Arata; Takeshi Ohori; Hideaki Yamamoto; Michio Niwano


The Japan Society of Applied Physics | 2017

Fabrication of silicon chips for evaluation of electrical characteristics of bilayer lipid membranes

Takeshi Ohori; Ayumi Hirano-Iwata; Daisuke Tadaki; Daichi Yamaura; Shun Araki; Miyu Yoshida; Kohei Arata; Hideaki Yamamoto; Michio Niwano


The Japan Society of Applied Physics | 2017

High-throughput drug screening with multi-well array chamber

Daichi Yamaura; Ryusuke Miyata; Shun Araki; Daisuke Tadaki; Hideaki Yamamoto; Ayumi Hirano-Iwata


The Japan Society of Applied Physics | 2016

Improvement of fabrication process for semiconductor silicon chips with micro-apertures for formation of artificial bilayer lipid membranes

Daisuke Tadaki; Ayumi Hirano-Iwata; Kenichi Ishibashi; Shun Araki; Miyu Yoshida; Kohei Arata; Takeshi Ohori; Hideaki Yamamoto; Michio Niwano


The Japan Society of Applied Physics | 2016

Microfabricated silicon chips for artificial bilayer lipid membranes: relationships between nano-edge structures and membrane formation

Kohei Arata; Ayumi Hirano-Iwata; Kenichi Ishibashi; Daisuke Tadaki; Shun Araki; Miyu Yoshida; Hideaki Yamamoto; Michio Niwano


The Japan Society of Applied Physics | 2016

Enhanced Incorporation of Ion Channels into Microfabricated Silicon Chips

Ayumi Hirano-Iwata; Miyu Yoshida; Shun Araki; Hideaki Yamamoto; Michio Niwano

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Kenichi Ishibashi

Meiji Pharmaceutical University

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