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Featured researches published by Silke Berger.


Proceedings of the National Academy of Sciences of the United States of America | 2007

The zebrafish candyfloss mutant implicates extracellular matrix adhesion failure in laminin α2-deficient congenital muscular dystrophy

Thomas E. Hall; Robert J. Bryson-Richardson; Silke Berger; Arie Jacoby; Nicholas J. Cole; Georgina E. Hollway; Joachim Berger; Peter D. Currie

Mutations in the human laminin α2 (LAMA2) gene result in the most common form of congenital muscular dystrophy (MDC1A). There are currently three models for the molecular basis of cellular pathology in MDC1A: (i) lack of LAMA2 leads to sarcolemmal weakness and failure, followed by cellular necrosis, as is the case in Duchenne muscular dystrophy (DMD); (ii) loss of LAMA2-mediated signaling during the development and maintenance of muscle tissue results in myoblast proliferation and fusion defects; (iii) loss of LAMA2 from the basement membrane of the Schwann cells surrounding the peripheral nerves results in a lack of motor stimulation, leading to effective denervation atrophy. Here we show that the degenerative muscle phenotype in the zebrafish dystrophic mutant, candyfloss (caf) results from mutations in the laminin α2 (lama2) gene. In vivo time-lapse analysis of mechanically loaded fibers and membrane permeability assays suggest that, unlike DMD, fiber detachment is not initially associated with sarcolemmal rupture. Early muscle formation and myoblast fusion are normal, indicating that any deficiency in early Lama2 signaling does not lead to muscle pathology. In addition, innervation by the primary motor neurons is unaffected, and fiber detachment stems from muscle contraction, demonstrating that muscle atrophy through lack of motor neuron activity does not contribute to pathology in this system. Using these and other analyses, we present a model of lama2 function where fiber detachment external to the sarcolemma is mechanically induced, and retracted fibers with uncompromised membranes undergo subsequent apoptosis.


Neuromuscular Disorders | 2010

Dystrophin-deficient zebrafish feature aspects of the Duchenne muscular dystrophy pathology

Joachim Berger; Silke Berger; Thomas E. Hall; Graham J. Lieschke; Peter D. Currie

Duchenne muscular dystrophy is caused by mutations in the dystrophin gene. As in humans, zebrafish dystrophin is initially expressed at the peripheral ends of the myofibres adjacent to the myotendinous junction and gradually shifts to non-junctional sites. Dystrophin-deficient zebrafish larvae are characterised by abundant necrotic fibres being replaced by mono-nucleated infiltrates, extensive fibrosis accompanied by inflammation, and a broader variation in muscle fibre cross-sectional areas. Muscle progenitor proliferation cannot compensate for the extensive skeletal muscle loss. Live imaging of dystrophin-deficient zebrafish larvae documents detaching myofibres elicited by muscle contraction. Correspondingly, the progressive phenotype of dystrophin-deficient zebrafish resembles many aspects of the human disease, suggesting that specific advantages of the zebrafish model system, such as the ability to undertake in vivo drug screens and real time analysis of muscle fibre loss, could be used to make novel insights relevant to understanding and treating the pathological basis of dystrophin-deficient muscular dystrophy.


Nature | 2014

Haematopoietic stem cell induction by somite-derived endothelial cells controlled by meox1

Phong Dang Nguyen; Georgina E. Hollway; Carmen Sonntag; Lee B. Miles; Thomas E. Hall; Silke Berger; Kristine Joy Fernandez; David B. Gurevich; Nicholas J. Cole; Sara Alaei; Mirana Ramialison; Robert L. Sutherland; Jose M. Polo; Graham J. Lieschke; Peter D. Currie

Haematopoietic stem cells (HSCs) are self-renewing stem cells capable of replenishing all blood lineages. In all vertebrate embryos that have been studied, definitive HSCs are generated initially within the dorsal aorta (DA) of the embryonic vasculature by a series of poorly understood inductive events. Previous studies have identified that signalling relayed from adjacent somites coordinates HSC induction, but the nature of this signal has remained elusive. Here we reveal that somite specification of HSCs occurs via the deployment of a specific endothelial precursor population, which arises within a sub-compartment of the zebrafish somite that we have defined as the endotome. Endothelial cells of the endotome are specified within the nascent somite by the activity of the homeobox gene meox1. Specified endotomal cells consequently migrate and colonize the DA, where they induce HSC formation through the deployment of chemokine signalling activated in these cells during endotome formation. Loss of meox1 activity expands the endotome at the expense of a second somitic cell type, the muscle precursors of the dermomyotomal equivalent in zebrafish, the external cell layer. The resulting increase in endotome-derived cells that migrate to colonize the DA generates a dramatic increase in chemokine-dependent HSC induction. This study reveals the molecular basis for a novel somite lineage restriction mechanism and defines a new paradigm in induction of definitive HSCs.


Development | 2007

Conditional activation of Pax6 in the developing cortex of transgenic mice causes progenitor apoptosis

Joachim Berger; Silke Berger; Tran Cong Tuoc; Marcello D'Amelio; Francesco Cecconi; Jessica A. Gorski; Kevin R. Jones; Peter Gruss; Anastassia Stoykova

During development, Pax6 is expressed in a rostrolateral-high to caudomedial-low gradient in the majority of the cortical radial glial progenitors and endows them with neurogenic properties. Using a Cre/loxP-based approach, we studied the effect of conditional activation of two Pax6 isoforms, Pax6 and Pax6-5a, on the corticogenesis of transgenic mice. We found that activation of either Pax6 or Pax6-5a inhibits progenitor proliferation in the developing cortex. Upon activation of transgenic Pax6, specific progenitor pools with distinct endogenous Pax6 expression levels at different developmental stages show defects in cell cycle progression and in the acquisition of apoptotic or neuronal cell fate. The results provide new evidence for the complex role of Pax6 in mammalian corticogenesis.


BMC Biology | 2007

FishNet: an online database of zebrafish anatomy

Robert J. Bryson-Richardson; Silke Berger; Thomas F. Schilling; Thomas E. Hall; Nicholas J. Cole; Abigail Gibson; James Sharpe; Peter D. Currie

BackgroundOver the last two decades, zebrafish have been established as a genetically versatile model system for investigating many different aspects of vertebrate developmental biology. With the credentials of zebrafish as a developmental model now well recognized, the emerging new opportunity is the wider application of zebrafish biology to aspects of human disease modelling. This rapidly increasing use of zebrafish as a model for human disease has necessarily generated interest in the anatomy of later developmental phases such as the larval, juvenile, and adult stages, during which many of the key aspects of organ morphogenesis and maturation take place. Anatomical resources and references that encompass these stages are non-existent in zebrafish and there is therefore an urgent need to understand how different organ systems and anatomical structures develop throughout the life of the fish.ResultsTo overcome this deficit we have utilized the technique of optical projection tomography to produce three-dimensional (3D) models of larval fish. In order to view and display these models we have created FishNet http://www.fishnet.org.au, an interactive reference of zebrafish anatomy spanning the range of zebrafish development from 24 h until adulthood.ConclusionFishNet contains more than 36 000 images of larval zebrafish, with more than 1 500 of these being annotated. The 3D models can be manipulated on screen or virtually sectioned. This resource represents the first complete embryo to adult atlas for any species in 3D.


PLOS Biology | 2011

Development and Evolution of the Muscles of the Pelvic Fin

Nicholas J. Cole; Thomas E. Hall; Emily K. Don; Silke Berger; Catherine A. Boisvert; Christine Neyt; Rolf Ericsson; Jean M.P. Joss; David B. Gurevich; Peter D. Currie

Locomotor strategies in terrestrial tetrapods have evolved from the utilisation of sinusoidal contractions of axial musculature, evident in ancestral fish species, to the reliance on powerful and complex limb muscles to provide propulsive force. Within tetrapods, a hindlimb-dominant locomotor strategy predominates, and its evolution is considered critical for the evident success of the tetrapod transition onto land. Here, we determine the developmental mechanisms of pelvic fin muscle formation in living fish species at critical points within the vertebrate phylogeny and reveal a stepwise modification from a primitive to a more derived mode of pelvic fin muscle formation. A distinct process generates pelvic fin muscle in bony fishes that incorporates both primitive and derived characteristics of vertebrate appendicular muscle formation. We propose that the adoption of the fully derived mode of hindlimb muscle formation from this bimodal character state is an evolutionary innovation that was critical to the success of the tetrapod transition.


Development | 2009

The zebrafish dystrophic mutant softy maintains muscle fibre viability despite basement membrane rupture and muscle detachment

Arie S. Jacoby; Elisabeth M. Busch-Nentwich; Robert J. Bryson-Richardson; Thomas E. Hall; Joachim Berger; Silke Berger; Carmen Sonntag; Caroline Sachs; Robert Geisler; Derek L. Stemple; Peter D. Currie

The skeletal muscle basement membrane fulfils several crucial functions during development and in the mature myotome and defects in its composition underlie certain forms of muscular dystrophy. A major component of this extracellular structure is the laminin polymer, which assembles into a resilient meshwork that protects the sarcolemma during contraction. Here we describe a zebrafish mutant, softy, which displays severe embryonic muscle degeneration as a result of initial basement membrane failure. The softy phenotype is caused by a mutation in the lamb2 gene, identifying laminin β2 as an essential component of this basement membrane. Uniquely, softy homozygotes are able to recover and survive to adulthood despite the loss of myofibre adhesion. We identify the formation of ectopic, stable basement membrane attachments as a novel means by which detached fibres are able to maintain viability. This demonstration of a muscular dystrophy model possessing innate fibre viability following muscle detachment suggests basement membrane augmentation as a therapeutic strategy to inhibit myofibre loss.


Science | 2016

Asymmetric division of clonal muscle stem cells coordinates muscle regeneration in vivo

David B. Gurevich; Phong Dang Nguyen; Ashley L. Siegel; Ophelia V. Ehrlich; Carmen Sonntag; Jennifer M. N. Phan; Silke Berger; Dhanushika Ratnayake; Lucy Hersey; Joachim Berger; Heather Verkade; Thomas E. Hall; Peter D. Currie

Dividing asymmetrically to fix muscle Resident tissue stem cells called satellite cells repair muscle after injury. However, how satellite cells operate inside living tissue is unclear. Gurevich et al. exploited the optical clarity of zebrafish larvae and used a series of genetic approaches to study muscle injury. After injury, satellite cells divide asymmetrically to generate a progenitor pool for muscle replacement and at the same time “self-renew” the satellite stem cell. This results in regeneration that is highly clonal in nature, validating many decades of in vitro analyses examining the regenerative capacity of skeletal muscle. Science, this issue p. 136 The visualization of myogenic repair in zebrafish muscle reveals a dynamic regeneration process in living animals. INTRODUCTION Mammalian skeletal muscle harbors tissue-specific stem cells that are triggered to replace damaged fibers after injury. Genetic ablation of satellite cells in the mouse results in a failure to regenerate muscle, which indicates that these cells are the major (and possibly only) mediators for repair of skeletal muscle. Further evidence for the central role of satellite cells in muscle regeneration comes from transplantation experiments with genetically marked cells, which demonstrate that satellite cells are highly proliferative myogenic precursors capable of self‐renewal and the resumption of quiescence, properties deemed important in a cell population responsible for muscle repair. Considerable in vitro evidence, derived from cultured fibers and myoblasts, is suggestive of a role for asymmetric division in generating both a self-renewing “immortal” stem cell and a differentiation-competent progenitor cell that proliferates and ultimately replaces damaged muscle. However, asymmetric division of satellite cells has not been documented in vivo. Furthermore, considerable doubt remains over how accurately in vitro studies can model satellite cell behavior, given that the isolation and culture of individual muscle fibers and cells stimulates satellite cell proliferation. Finally, it is not clear whether the environment an activated satellite cell encounters in a single fiber explant, or in culture, mimics the molecular and biophysical architecture of a regenerating muscle injury in vivo. Consequently, what role, if any, the wound environment itself plays in regeneration and self-renewal is difficult to address in these systems. RATIONALE Using the optical clarity and genetic tractability of the zebrafish system, we developed tools to track and image the regeneration of living muscle tissue after injury. Marking muscle stem and progenitor cells with transgenes and using long-term imaging and lineage-tracing modalities enabled us to visualize cell movements and behaviors during regeneration in vivo. RESULTS In vivo cell tracking permitted high-resolution imaging of the entire process of muscle regeneration, from injury to fiber replacement. Using this approach, we were able to determine the morphological, cellular, and genetic basis for zebrafish muscle regeneration. Our analysis identified a stem cell niche in the zebrafish myotome that is equivalent to the mammalian satellite cell system, revealing that this evolutionarily ancient stem cell is probably present throughout the vertebrate phylogeny. Complex interactions were observed between satellite cells and both injured and uninjured fibers within the wound environment. Among the most notable of these was the identification of filopodia-like projections, emanating from uninjured fibers, which adhere to and “lasso” the activated satellite cell to guide it to the wound edge. Furthermore, we documented the in vivo occurrence of asymmetric satellite cell division, a process that drives both self-renewal and regeneration via a clonally restricted progenitor pool. CONCLUSION Asymmetric divisions occur during in vivo muscle regeneration to generate clonally related progenitors required for muscle repair. This finding resolves a long-term debate surrounding the existence of this mechanism of stem cell self-renewal and muscle repair in vivo. Our results also reveal the highly dynamic nature of the wound environment, where uninjured fibers at the wound edge play a crucial role in directing differentiating progenitors to regions of the wound that are most in need of new fiber addition. Mechanism of in vivo muscle repair. (A to C) Muscle regeneration is clonal. Regenerating fibers (outlined in white) express the same color after fluorescent lineage tracing, indicating clonal derivation from a single stem cell. Sagittal, transverse, and coronal sections are shown in (A) to (C), respectively. (D) Regeneration dynamics in vivo. Quiescent satellite cells, activated upon injury, undergo asymmetric division, which results in self-renewing or proliferating cells. Proliferative cells undergo myogenesis to generate de novo immature fibers. Skeletal muscle is an example of a tissue that deploys a self-renewing stem cell, the satellite cell, to effect regeneration. Recent in vitro studies have highlighted a role for asymmetric divisions in renewing rare “immortal” stem cells and generating a clonal population of differentiation-competent myoblasts. However, this model currently lacks in vivo validation. We define a zebrafish muscle stem cell population analogous to the mammalian satellite cell and image the entire process of muscle regeneration from injury to fiber replacement in vivo. This analysis reveals complex interactions between satellite cells and both injured and uninjured fibers and provides in vivo evidence for the asymmetric division of satellite cells driving both self-renewal and regeneration via a clonally restricted progenitor pool.


Developmental Biology | 2012

Scube activity is necessary for Hedgehog signal transduction in vivo

Jacque-Lynne Fa Johnson; Thomas E. Hall; Jennifer M. Dyson; Carmen Sonntag; Katie L Ayers; Silke Berger; Philippe Gautier; Christina A. Mitchell; Georgina E. Hollway; Peter D. Currie

The Hedgehog (HH) signaling pathway is a central regulator of embryonic development, controlling the pattern and proliferation of a wide variety of organs. Previous studies have implicated the secreted protein, Scube2, in HH signal transduction in the zebrafish embryo (Hollway et al., 2006; Kawakami et al., 2005; Woods and Talbot, 2005) although the nature of the molecular function of Scube2 in this process has remained undefined. This analysis has been compounded by the fact that removal of Scube2 activity in the zebrafish embryo leads to only subtle defects in HH signal transduction in vivo (Barresi et al., 2000; Hollway et al., 2006; Ochi and Westerfield, 2007; van Eeden et al., 1996; Wolff et al., 2003). Here we present the discovery of two additional scube genes in zebrafish, scube1 and scube3, and demonstrate their roles in facilitating HH signal transduction. Knocking down the function of all three scube genes simultaneously phenocopies a complete loss of HH signal transduction in the embryo, revealing that Scube signaling is essential for HH signal transduction in vivo. We further define the molecular role of scube2 in HH signaling.


Journal of Cellular and Molecular Medicine | 2011

Evaluation of exon‐skipping strategies for Duchenne muscular dystrophy utilizing dystrophin‐deficient zebrafish

Joachim Berger; Silke Berger; Arie Jacoby; S.D. Wilton; Peter D. Currie

Duchenne muscular dystophy (DMD) is a severe muscle wasting disease caused by mutations in the dystrophin gene. By utilizing antisense oligonucleotides, splicing of the dystrophin transcript can be altered so that exons harbouring a mutation are excluded from the mature mRNA. Although this approach has been shown to be effective to restore partially functional dystrophin protein, the level of dystrophin protein that is necessary to rescue a severe muscle pathology has not been addressed. As zebrafish dystrophin mutants (dmd) resemble the severe muscle pathology of human patients, we have utilized this model to evaluate exon skipping. Novel dmd mutations were identified to enable the design of phenotype rescue studies via morpholino administration. Correlation of induced exon‐skipping efficiency and the level of phenotype rescue suggest that relatively robust levels of exon skipping are required to achieve significant therapeutic ameliorations and that pre‐screening analysis of exon‐skipping drugs in zebrafish may help to more accurately predict clinical trials for therapies of DMD.

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Peter D. Currie

Australian Regenerative Medicine Institute

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Thomas E. Hall

University of Queensland

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Joachim Berger

Australian Regenerative Medicine Institute

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Georgina E. Hollway

Victor Chang Cardiac Research Institute

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David B. Gurevich

Australian Regenerative Medicine Institute

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Phong Dang Nguyen

Australian Regenerative Medicine Institute

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Peter D. Currie

Australian Regenerative Medicine Institute

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