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Dive into the research topics where Simone S. Cotrin is active.

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Featured researches published by Simone S. Cotrin.


Biological Chemistry | 2005

Recombinant human cathepsin X is a carboxymonopeptidase only: a comparison with cathepsins B and L.

Luciano Puzer; Simone S. Cotrin; Maria Helena Sedenho Cezari; Izaura Y. Hirata; Maria A. Juliano; Ivica Stefe; Dušan Turk; Boris Turk; Luiz Juliano; Adriana K. Carmona

Abstract The S1 and S2 subsite specificity of recombinant human cathepsins X was studied using fluorescence resonance energy transfer (FRET) peptides with the general sequences Abz-Phe-Xaa-Lys(Dnp)-OH and Abz-Xaa-Arg-Lys(Dnp)-OH, respectively (Abz=ortho-aminobenzoic acid and Dnp=2,4-dinitrophenyl; Xaa=various amino acids). Cathepsin X cleaved all substrates exclusively as a carboxymonopeptidase and exhibited broad specificity. For comparison, these peptides were also assayed with cathepsins B and L. Cathepsin L hydrolyzed the majority of them with similar or higher catalytic efficiency than cathepsin X, acting as an endopeptidase mimicking a carboxymonopeptidase (pseudo-carboxymonopeptidase). In contrast, cathepsin B exhibited poor catalytic efficiency with these substrates, acting as a carboxydipeptidase or an endopeptidase. The S1′ subsite of cathepsin X was mapped with the peptide series Abz-Phe-Arg-Xaa-OH and the enzyme preferentially hydrolyzed substrates with hydrophobic residues in the P1′ position.


Biotechnology Progress | 2008

Production of a His‐tagged canecystatin in transgenic sugarcane and subsequent purification

Carolina Werner Ribeiro; Andrea Soares-Costa; Maria Cristina Falco; Sabrina Moutinho Chabregas; Eugênio César Ulian; Simone S. Cotrin; Adriana K. Carmona; Lucimeire A. Santana; Maria Luiza Vilela Oliva; Flávio Henrique-Silva

Transgenic plants have been used widely as expression systems of recombinant proteins in recent years. This process can be an efficient alternative for the large‐scale production of proteins. In this work, we present the establishment of transgenic sugarcane expressing a His‐tagged canecystatin under the control of the maize ubiquitin promoter. A number of studies have demonstrated that cystatins, which are natural inhibitors of cysteine proteinases, can be used for protection against insect attacks. A transformed sugarcane plant that presented high levels of HISCaneCPI‐1 expression, was selected for the purification of this protein through affinity chromatography in a nickel column. This purified HISCaneCPI‐1 was immunodetected using a polyclonal antibody, which was also able to detect the HISCaneCPI‐1 in a crude extract from transgenic plant leaves. Assays of inhibitory activity performed with the purified HISCaneCPI‐1 revealed its ability to inhibit the catalytic activity of midgut cysteine proteinase partially purified from the sugarcane weevil Sphenophorus levis and human cathepsin L in nanomolar order. These studies demonstrate that sugarcane is a viable expression system for recombinant protein production.


Analytical Biochemistry | 2015

Specific calpain activity evaluation in Plasmodium parasites

Mayrim M. Gomes; Alexandre Budu; Priscilla D.S. Ventura; Piero Bagnaresi; Simone S. Cotrin; Rodrigo L.O.R. Cunha; Adriana K. Carmona; Luiz Juliano; Marcos L. Gazarini

In the intraerythrocytic trophozoite stages of Plasmodium falciparum, the calcium-dependent cysteine protease calpain (Pf-calpain) has an important role in the parasite calcium modulation and cell development. We established specific conditions to follow by confocal microscopy and spectrofluorimetry measurements the intracellular activity of Pf-calpain in live cells. The catalytic activity was measured using the fluorogenic Z-Phe-Arg-MCA (where Z is carbobenzoxy and MCA is 4-methylcoumaryl-7-amide). The calmodulin inhibitor calmidazolium and the sarcoplasmic reticulum calcium ATPase inhibitor thapsigargin were used for modifications in the cytosolic calcium concentrations that persisted in the absence of extracellular calcium. The observed calcium-dependent peptidase activity was greatly inhibited by specific cysteine protease inhibitor E-64 and by the selective calpain inhibitor ALLN (N-acetyl-l-leucyl-l-leucyl-l-norleucinal). Taken together, we observed that intracellular Pf-calpain can be selectively detected and is the main calcium-dependent protease in the intraerythrocytic stages of the parasite. The method described here can be helpful in cell metabolism studies and antimalarial drug screening.


Analytical Biochemistry | 2004

Positional-scanning combinatorial libraries of fluorescence resonance energy transfer peptides to define substrate specificity of carboxydipeptidases: assays with human cathepsin B

Simone S. Cotrin; Luciano Puzer; Wagner Alves de Souza Judice; Luiz Juliano; Adriana K. Carmona; Maria A. Juliano


Archives of Biochemistry and Biophysics | 2004

Comparative substrate specificity analysis of recombinant human cathepsin V and cathepsin L.

Luciano Puzer; Simone S. Cotrin; Marcio F.M. Alves; Tobore Egborge; Mariana S. Araujo; Maria A. Juliano; Luiz Juliano; Dieter Brömme; Adriana K. Carmona


Biochemical Journal | 2003

S3 to S3 subsite specificity of recombinant human cathepsin K and development of selective internally quenched fluorescent substrates

Marcio F.M. Alves; Luciano Puzer; Simone S. Cotrin; Maria A. Juliano; Luiz Juliano; Dieter Brömme; Adriana K. Carmona


FEBS Journal | 2004

Carboxydipeptidase activities of recombinant cysteine peptidases. Cruzain of Trypanosoma cruzi and CPB of Leishmania mexicana.

Wagner A.S. Judice; Luciano Puzer; Simone S. Cotrin; Adriana K. Carmona; Graham H. Coombs; Luiz Juliano; Maria A. Juliano


Biochemical and Biophysical Research Communications | 2004

Inhibitory selectivity of canecystatin: a recombinant cysteine peptidase inhibitor from sugarcane

Maria Luiza Vilela Oliva; Adriana K. Carmona; Sheila Siqueira Andrade; Simone S. Cotrin; Andrea Soares-Costa; Flávio Henrique-Silva


Biochemical and Biophysical Research Communications | 2006

An unexpected inhibitory activity of Kunitz-type serine proteinase inhibitor derived from Boophilus microplus trypsin inhibitor on cathepsin L

Sergio D. Sasaki; Simone S. Cotrin; Adriana K. Carmona; Aparecida S. Tanaka


Molecular and Biochemical Parasitology | 2013

Substrate specificity studies of the cysteine peptidases falcipain-2 and falcipain-3 from Plasmodium falciparum and demonstration of their kininogenase activity

Simone S. Cotrin; Iuri E. Gouvea; Pollyana M.S. Melo; Piero Bagnaresi; Diego M. Assis; Mariana S. Araujo; Maria A. Juliano; Marcos L. Gazarini; Philip J. Rosenthal; Luiz Juliano; Adriana K. Carmona

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Adriana K. Carmona

Federal University of São Paulo

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Luiz Juliano

Federal University of São Paulo

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Maria A. Juliano

Federal University of São Paulo

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Luciano Puzer

Federal University of São Paulo

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Andrea Soares-Costa

Federal University of São Carlos

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Flávio Henrique-Silva

Federal University of São Carlos

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Marcio F.M. Alves

Federal University of São Paulo

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Marcos L. Gazarini

Federal University of São Paulo

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Maria Luiza Vilela Oliva

Federal University of São Paulo

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Mariana S. Araujo

Federal University of São Paulo

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