Suma Gopinathan
Lexicon Pharmaceuticals
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Publication
Featured researches published by Suma Gopinathan.
Journal of Medicinal Chemistry | 2010
Jeffrey Bagdanoff; Michael S. Donoviel; Amr Nouraldeen; Marianne Carlsen; Theodore C. Jessop; James Tarver; Saadat Aleem; Li Dong; Haiming Zhang; Lakmal W. Boteju; Jill Hazelwood; Jack Yan; Mark S. Bednarz; Suman Layek; Iris B. Owusu; Suma Gopinathan; Liam Moran; Zhong Lai; Jeffrey A. Kramer; S. David Kimball; Padmaja Yalamanchili; William Heydorn; Kenny Frazier; Barbara Brooks; Philip Manton Brown; Alan A. Wilson; William K. Sonnenburg; Alan Main; Kenneth G. Carson; Tamas Oravecz
Sphingosine 1-phosphate lyase (S1PL) has been characterized as a novel target for the treatment of autoimmune disorders using genetic and pharmacological methods. Medicinal chemistry efforts targeting S1PL by direct in vivo evaluation of synthetic analogues of 2-acetyl-4(5)-(1(R),2(S),3(R),4-tetrahydroxybutyl)-imidazole (THI, 1) led to the discovery of 2 (LX2931) and 4 (LX2932). The immunological phenotypes observed in S1PL deficient mice were recapitulated by oral administration of 2 or 4. Oral dosing of 2 or 4 yielded a dose-dependent decrease in circulating lymphocyte numbers in multiple species and showed a therapeutic effect in rodent models of rheumatoid arthritis (RA). Phase I clinical trials indicated that 2, the first clinically studied inhibitor of S1PL, produced a dose-dependent and reversible reduction of circulating lymphocytes and was well tolerated at dose levels of up to 180 mg daily. Phase II evaluation of 2 in patients with active rheumatoid arthritis is currently underway.
Journal of Medicinal Chemistry | 2009
Jeffrey Bagdanoff; Michael S. Donoviel; Amr Nouraldeen; James Tarver; Qinghong Fu; Marianne Carlsen; Theodore C. Jessop; Haiming Zhang; Jill Hazelwood; Huy H. Nguyen; Simon D.P. Baugh; Michael Gardyan; Kristen M. Terranova; Joseph Barbosa; Jack Yan; Mark S. Bednarz; Suman Layek; Lawrence F. Courtney; Jerry Andrew Taylor; Ann Marie Digeorge-Foushee; Suma Gopinathan; Debra Bruce; Traci Smith; Liam Moran; Emily O’Neill; Jeffrey A. Kramer; Zhong Lai; S. David Kimball; Qingyun Liu; Weimei Sun
During nearly a decade of research dedicated to the study of sphingosine signaling pathways, we identified sphingosine-1-phosphate lyase (S1PL) as a drug target for the treatment of autoimmune disorders. S1PL catalyzes the irreversible decomposition of sphingosine-1-phosphate (S1P) by a retro-aldol fragmentation that yields hexadecanaldehyde and phosphoethanolamine. Genetic models demonstrated that mice expressing reduced S1PL activity had decreased numbers of circulating lymphocytes due to altered lymphocyte trafficking, which prevented disease development in multiple models of autoimmune disease. Mechanistic studies of lymphoid tissue following oral administration of 2-acetyl-4(5)-(1(R),2(S),3(R),4-tetrahydroxybutyl)-imidazole (THI) 3 showed a clear relationship between reduced lyase activity, elevated S1P levels, and lower levels of circulating lymphocytes. Our internal medicinal chemistry efforts discovered potent analogues of 3 bearing heterocycles as chemical equivalents of the pendant carbonyl present in the parent structure. Reduction of S1PL activity by oral administration of these analogues recapitulated the phenotype of mice with genetically reduced S1PL expression.
Journal of Medicinal Chemistry | 2009
Bryce Alden Harrison; N. Andrew Whitlock; Michael Victor Voronkov; Zheng Y. Almstead; Kun Jian Gu; Ross Mabon; Michael Gardyan; Brian D. Hamman; Jason Allen; Suma Gopinathan; Beth McKnight; Mike J. Crist; Yulian Zhang; Ying Liu; Lawrence F. Courtney; Billie Key; Julia Zhou; Nita Patel; Phil W. Yates; Qingyun Liu; Alan Wilson; S. David Kimball; Craig E. Crosson; Dennis S. Rice; David B. Rawlins
The discovery of a pyrrolopyrimidine class of LIM-kinase 2 (LIMK2) inhibitors is reported. These LIMK2 inhibitors show good potency in enzymatic and cellular assays and good selectivity against ROCK. After topical dosing to the eye in a steroid induced mouse model of ocular hypertension, the compounds reduce intraocular pressure to baseline levels. The compounds also increase outflow facility in a pig eye perfusion assay. These results suggest LIMK2 may be an effective target for treating ocular hypertension and associated glaucoma.
PLOS ONE | 2014
Konstantin V. Salojin; Brian D. Hamman; Wei-Chun Chang; Kanchan Jhaver; Amin Al-Shami; Jeannette Crisostomo; Carrie Wilkins; Ann Marie Digeorge-Foushee; Jason Allen; Nita Patel; Suma Gopinathan; Julia Zhou; Amr Nouraldeen; Theodore C. Jessop; Jeffrey Bagdanoff; David J. Augeri; Robert Read; Peter Vogel; Jonathan Swaffield; Alan Wilson; Kenneth A. Platt; Kenneth G. Carson; Alan Main; Brian Zambrowicz; Tamas Oravecz
Mammalian sterile 20-like kinase 1 (Mst1) is a MAPK kinase kinase kinase which is involved in a wide range of cellular responses, including apoptosis, lymphocyte adhesion and trafficking. The contribution of Mst1 to Ag-specific immune responses and autoimmunity has not been well defined. In this study, we provide evidence for the essential role of Mst1 in T cell differentiation and autoimmunity, using both genetic and pharmacologic approaches. Absence of Mst1 in mice reduced T cell proliferation and IL-2 production in vitro, blocked cell cycle progression, and elevated activation-induced cell death in Th1 cells. Mst1 deficiency led to a CD4+ T cell development path that was biased toward Th2 and immunoregulatory cytokine production with suppressed Th1 responses. In addition, Mst1−/− B cells showed decreased stimulation to B cell mitogens in vitro and deficient Ag-specific Ig production in vivo. Consistent with altered lymphocyte function, deletion of Mst1 reduced the severity of experimental autoimmune encephalomyelitis (EAE) and protected against collagen-induced arthritis development. Mst1−/− CD4+ T cells displayed an intrinsic defect in their ability to respond to encephalitogenic antigens and deletion of Mst1 in the CD4+ T cell compartment was sufficient to alleviate CNS inflammation during EAE. These findings have prompted the discovery of novel compounds that are potent inhibitors of Mst1 and exhibit desirable pharmacokinetic properties. In conclusion, this report implicates Mst1 as a critical regulator of adaptive immune responses, Th1/Th2-dependent cytokine production, and as a potential therapeutic target for immune disorders.
ACS Medicinal Chemistry Letters | 2015
Bryce Alden Harrison; Zheng Y. Almstead; Hugh Alfred Burgoon; Michael Gardyan; Nicole Cathleen Goodwin; Jason P. Healy; Ying Liu; Ross Mabon; Brett Marinelli; Lakshman Samala; Yulian Zhang; Terry R. Stouch; N. Andrew Whitlock; Suma Gopinathan; Beth McKnight; Shuli Wang; Nita Patel; Alan Wilson; Brian D. Hamman; Dennis S. Rice; David B. Rawlins
The structure of LX7101, a dual LIM-kinase and ROCK inhibitor for the treatment of ocular hypertension and associated glaucoma, is disclosed. Previously reported LIM kinase inhibitors suffered from poor aqueous stability due to solvolysis of the central urea. Replacement of the urea with a hindered amide resulted in aqueous stable compounds, and addition of solubilizing groups resulted in a set of compounds with good properties for topical dosing in the eye and good efficacy in a mouse model of ocular hypertension. LX7101 was selected as a clinical candidate from this group based on superior efficacy in lowering intraocular pressure and a good safety profile. LX7101 completed IND enabling studies and was tested in a Phase 1 clinical trial in glaucoma patients, where it showed efficacy in lowering intraocular pressure.
Journal of Pharmacological and Toxicological Methods | 2013
Suma Gopinathan; Emily O’Neill; Lawrence A. Rodriguez; Rose Champ; Megan Phillips; Amr Nouraldeen; Mary Wendt; Alan Wilson; Jeffrey A. Kramer
INTRODUCTION Toxicology and pharmacology studies conducted in the early stages of drug discovery often require formulation strategies involving the use of excipients with limited knowledge regarding their preclinical safety liabilities. The use of excipients is vital to efforts to solubilize and deliver small molecules in drug discovery. Whilst excipients can have a significant impact on pharmacology and toxicology studies by enabling solubility to maximize systemic exposure, they also have the potential to obscure clinical pathology endpoints. In this article, we report on the in vivo safety in rats for 18 excipients commonly employed in formulations for preclinical pharmacology and toxicology studies. METHODS The test articles were administered once daily for five days, by oral gavage to male Sprague Dawley rats, and the animals monitored for visible clinical signs. At the end of the study, routine necropsy and clinical pathology endpoints were investigated. RESULTS None of the excipients tested were acutely toxic. However, there were effects on parameters commonly evaluated as indicators of health and/or toxicological response in regulated preclinical safety studies. DISCUSSION While the excipients tested were generally well tolerated, several were found to affect common clinical pathology endpoints in a manner that might confound or conceivably mask the interpretation of compound mediated adverse/pharmacological effects.
Future Medicinal Chemistry | 2010
Suma Gopinathan; Amr Nouraldeen; Alan Ge Wilson
For small-molecule drugs the oral route of administration remains the most popular means of delivery for many indications. Optimizing oral bioavailability is, therefore, of critical importance in both drug discovery and development. However, while formulation development is routinely evaluated in clinical development, limited attention appears to be focused on improving exposure following oral delivery in early preclinical testing. The reasons for this appear to be limited compound availability and the requirement for a very rapid turnaround time. While some effort has been made to address solubility for intravenous formulation development, there is limited information available regarding formulation screening for oral delivery in drug discovery and preclinical development. In this brief article, we provide some details on our high-throughput, low compound requirement screen for oral formulation development. This screen has direct application in lead identification and development. The assay has been vali...
Journal of Medicinal Chemistry | 2017
Nicole Cathleen Goodwin; Zhi-Ming Ding; Bryce Alden Harrison; Eric Strobel; Angela L. Harris; Melinda Smith; Andrea Y. Thompson; Wendy Xiong; Faika Mseeh; Debra Bruce; Damaris S. Diaz; Suma Gopinathan; Ling Li; Emily O’Neill; Mary Thiel; Alan Wilson; Kenneth G. Carson; David R. Powell; David B. Rawlins
The increasing number of people afflicted with diabetes throughout the world is a major health issue. Inhibitors of the sodium-dependent glucose cotransporters (SGLT) have appeared as viable therapeutics to control blood glucose levels in diabetic patents. Herein we report the discovery of LX2761, a locally acting SGLT1 inhibitor that is highly potent in vitro and delays intestinal glucose absorption in vivo to improve glycemic control.
Toxicologic Pathology | 2010
Jeffrey A. Kramer; Emily O’Neill; Megan Phillips; Debra Bruce; Traci Smith; Melinda M. Albright; Sairam Bellum; Suma Gopinathan; William Heydorn; Xuemei Liu; Amr Nouraldeen; Bobby Joe Payne; Robert Read; Peter Vogel; Xiang-Qing Yu; Alan Wilson
The rat has been the preferred rodent toxicology species since before regulatory requirements have been in place, and there exists in the pharmaceutical industry and the regulatory agencies a significant amount of historical data for the rat. The resulting experience base with the rat makes the possibility of replacing it with the mouse for regulated toxicology studies untenable for all but the most extreme circumstances. However, toxicologists are very familiar with the mouse as a model for chronic carcinogenicity studies, and there exist multiple preclinical mouse models of disease. The authors evaluated the use of the mouse for early in vivo toxicology signal generation and prioritization of small molecule lead compounds prior to nomination of a development candidate. In five-day oral gavage studies with three test agents in the mouse, the authors were able to identify the same dose-limiting toxicities as those identified in the rat, including examples of compound-mediated hemolysis as well as microscopic lesions in the alimentary canal, kidney, and pancreas. Performing early signal generation studies in the mouse allows for earlier assessment of the safety liabilities of small molecules, requires significantly less compound, and allows evaluation of more compounds earlier in the project’s life cycle.
Journal of Pharmacology and Experimental Therapeutics | 2017
David R. Powell; Melinda Smith; Deon Doree; Angela L. Harris; Jennifer Greer; Christopher M. DaCosta; Andrea Y. Thompson; Sabrina Jeter-Jones; Wendy Xiong; Kenneth G. Carson; Nicole Cathleen Goodwin; Bryce Alden Harrison; David Brent Rawlins; Eric Strobel; Suma Gopinathan; Alan Wilson; Faika Mseeh; Brian Zambrowicz; Zhi-Ming Ding
LX2761 is a potent sodium/glucose cotransporter 1 inhibitor restricted to the intestinal lumen after oral administration. Studies presented here evaluated the effect of orally administered LX2761 on glycemic control in preclinical models. In healthy mice and rats treated with LX2761, blood glucose excursions were lower and plasma total glucagon-like peptide-1 (GLP-1) levels higher after an oral glucose challenge; these decreased glucose excursions persisted even when the glucose challenge occurred 15 hours after LX2761 dosing in ad lib-fed mice. Further, treating mice with LX2761 and the dipeptidyl-peptidase 4 inhibitor sitagliptin synergistically increased active GLP-1 levels, suggesting increased LX2761-mediated release of GLP-1 into the portal circulation. LX2761 also lowered postprandial glucose, fasting glucose, and hemoglobin A1C, and increased plasma total GLP-1, during long-term treatment of mice with either early- or late-onset streptozotocin-diabetes; in the late-onset cohort, LX2761 treatment improved survival. Mice and rats treated with LX2761 occasionally had diarrhea; this dose-dependent side effect decreased in severity and frequency over time, and LX2761 doses were identified that decreased postprandial glucose excursions without causing diarrhea. Further, the frequency of LX2761-associated diarrhea was greatly decreased in mice either by gradual dose escalation or by pretreatment with resistant starch 4, which is slowly digested to glucose in the colon, a process that primes the colon for glucose metabolism by selecting for glucose-fermenting bacterial species. These data suggest that clinical trials are warranted to determine if LX2761 doses and dosing strategies exist that provide improved glycemic control combined with adequate gastrointestinal tolerability in people living with diabetes.