Terence W. Nixon

High magnetic field water and metabolite proton T1 and T2 relaxation in rat brain in vivo

Comprehensive and quantitative measurements of T1 and T2 relaxation times of water, metabolites, and macromolecules in rat brain under similar experimental conditions at three high magnetic field strengths (4.0 T, 9.4 T, and 11.7 T) are presented. Water relaxation showed a highly significant increase (T1) and decrease (T2) with increasing field strength for all nine analyzed brain structures. Similar but less pronounced effects were observed for all metabolites. Macromolecules displayed field‐independent T2 relaxation and a strong increase of T1 with field strength. Among other features, these data show that while spectral resolution continues to increase with field strength, the absolute signal‐to‐noise ratio (SNR) in T1/T2‐based anatomical MRI quickly levels off beyond ∼7 T and may actually decrease at higher magnetic fields. Magn Reson Med, 2006.

Dynamic multi-coil shimming of the human brain at 7 T.

High quality magnetic field homogenization of the human brain (i.e. shimming) for MR imaging and spectroscopy is a demanding task. The susceptibility differences between air and tissue are a longstanding problem as they induce complex field distortions in the prefrontal cortex and the temporal lobes. To date, the theoretical gains of high field MR have only been realized partially in the human brain due to limited magnetic field homogeneity. A novel shimming technique for the human brain is presented that is based on the combination of non-orthogonal basis fields from 48 individual, circular coils. Custom-built amplifier electronics enabled the dynamic application of the multi-coil shim fields in a slice-specific fashion. Dynamic multi-coil (DMC) shimming is shown to eliminate most of the magnetic field inhomogeneity apparent in the human brain at 7 T and provided improved performance compared to state-of-the-art dynamic shim updating with zero through third order spherical harmonic functions. The novel technique paves the way for high field MR applications of the human brain for which excellent magnetic field homogeneity is a prerequisite.

Dynamic shim updating (DSU) for multislice signal acquisition.

Dynamic shim updating (DSU) is a technique for achieving optimal magnetic field homogeneity over extended volumes by dynamically updating an optimal shim setting for each individual slice in a multislice acquisition protocol. Here the practical implementation of DSU using all first‐ and second‐order shims is described. In particular, the hardware modifications and software requirements are demonstrated. Furthermore, the temporal effects of dynamically switching shim currents are investigated and a Z2‐to‐Z0 compensation unit is described and implemented to counteract the temporal Z0 variations following a change in the Z2 shim current. The optimal shim settings for all slices are determined with a quantitative and user‐independent, multislice phase‐mapping sequence. The performance of DSU is evaluated from multislice phase maps and spectroscopic images acquired on rat brain in vivo. DSU improved the magnetic field homogeneity over all spatial slices, with a more pronounced effect on the slices positioned away from the magnet isocenter, thereby making the magnetic field homogeneity highly uniform over an extended volume. Magn Reson Med 49:409–416, 2003.

Magnetic Field Modeling with a Set of Individual Localized Coils

A set of generic, circular individual coils is shown to be capable of generating highly complex magnetic field distributions in a flexible fashion. Arbitrarily oriented linear field gradients can be generated in three-dimensional as well as sliced volumes at amplitudes that allow imaging applications. The multi-coil approach permits the simultaneous generation of linear MRI encoding fields and complex shim fields by the same setup, thereby reducing system complexity. The choice of the sensitive volume over which the magnetic fields are optimized remains temporally and spatially variable at all times. The restriction of the field synthesis to experimentally relevant, smaller volumes such as single slices directly translates into improved efficiency, i.e. higher magnetic field amplitudes and/or reduced coil currents. For applications like arterial spin labeling, signal spoiling and diffusion weighting, perfect linearity of the gradient fields is not required and reduced demands on accuracy can also be readily translated into improved efficiency. The first experimental realization was achieved for mouse head MRI with 24 coils that were mounted on the surface of a cylindrical former. Oblique linear field gradients of 20 kHz/cm (47 mT/m) were generated with a maximum current of 1.4A which allowed radial imaging of a mouse head. The potential of the new approach for generating arbitrary magnetic field shapes is demonstrated by synthesizing the more complex, higher order spherical harmonic magnetic field distributions X2-Y2, Z2 and Z2X. The new multi-coil approach provides the framework for the integration of conventional imaging and shim coils into a single multi-coil system in which shape, strength, accuracy and spatial coverage of the magnetic field can be specifically optimized for the application at hand.

Magnetic field homogenization of the human prefrontal cortex with a set of localized electrical coils

The prefrontal cortex is a common target brain structure in psychiatry and neuroscience due to its role in working memory and cognitive control. Large differences in magnetic susceptibility between the air‐filled sinuses and the tissue/bone in the frontal part of the human head cause a strong and highly localized magnetic field focus in the prefrontal cortex. As a result, image distortion and signal dropout are observed in MR imaging. A set of external electrical coils is presented that provides localized and high‐amplitude shim fields in the prefrontal cortex, with minimum impact on the rest of the brain when combined with regular zero‐ to second‐order spherical harmonics shimming. The experimental realization of the new shim method strongly minimized or even eliminated signal dropout in gradient‐echo images acquired at settings typically used in functional magnetic resonance at 4 T. Magn Reson Med, 2009.

Multicoil shimming of the mouse brain.

MR imaging and spectroscopy allow the noninvasive measurement of brain function and physiology, but excellent magnetic field homogeneity is required for meaningful results. The homogenization of the magnetic field distribution in the mouse brain (i.e., shimming) is a difficult task due to complex susceptibility‐induced field distortions combined with the small size of the object. To date, the achievement of satisfactory whole brain shimming in the mouse remains a major challenge. The magnetic fields generated by a set of 48 circular coils (diameter 13 mm) that were arranged in a cylinder‐shaped pattern of 32 mm diameter and driven with individual dynamic current ranges of ±1 A are shown to be capable of substantially reducing the field distortions encountered in the mouse brain at 9.4 Tesla. Static multicoil shim fields allowed the reduction of the standard deviation of Larmor frequencies by 31% compared to second order spherical harmonics shimming and a 66% narrowing was achieved with the slice‐specific application of the multicoil shimming with a dynamic approach. For gradient echo imaging, multicoil shimming minimized shim‐related signal voids in the brain periphery and allowed overall signal gains of up to 51% compared to spherical harmonics shimming. Magn Reson Med, 2011.

Dynamically shimmed multivoxel 1H magnetic resonance spectroscopy and multislice magnetic resonance spectroscopic imaging of the human brain

In vivo multivoxel Magnetic Resonance Spectroscopy (MRS) and multislice Magnetic Resonance Spectroscopic Imaging (MRSI) are extremely susceptible to poor homogeneity of the static magnetic field. Existing room‐temperature (RT) shim technology can adequately optimize the B0 homogeneity of local volumes, such as single voxels. However, the widespread global homogeneity required for in vivo spectral acquisitions from multiple volumes in the human brain cannot be attained with a single RT shim setting. Dynamic shim updating (DSU) allows for use of local RT shim B0 homogeneity compensation capabilities in a global fashion. Here, by updating first‐ and second‐order shims on a voxel‐ and slice‐specific basis using a pre‐emphasized DSU system, we present multivoxel MRS and multislice MRSI of the human brain. These results demonstrate that DSU can increase multivoxel MRS acquisition capabilities and significantly improve the quality of multislice MRSI data. Magn Reson Med 57:587–591, 2007.

Dynamic multi-coil technique (DYNAMITE) shimming for echo-planar imaging of the human brain at 7 Tesla.

Gradient-echo echo-planar imaging (EPI) is the primary method of choice in functional MRI and other methods relying on fast MRI to image brain activation and connectivity. However, the high susceptibility of EPI towards B0 magnetic field inhomogeneity poses serious challenges. Conventional magnetic field shimming with low-order spherical harmonic (SH) functions is capable of compensating shallow field distortions, but performs poorly for global brain shimming or on specific areas with strong susceptibility-induced B0 distortions such as the prefrontal cortex (PFC). Excellent B0 homogeneity has been demonstrated recently in the human brain at 7 Tesla with the DYNAmic Multi-coIl TEchnique (DYNAMITE) for magnetic field shimming (J Magn Reson (2011) 212:280-288). Here, we report the benefits of DYNAMITE shimming for multi-slice EPI and T2* mapping. A standard deviation of 13Hz was achieved for the residual B0 distribution in the human brain at 7 Tesla with DYNAMITE shimming and was 60% lower compared to conventional shimming that employs static zero through third order SH shapes. The residual field inhomogeneity with SH shimming led to an average 8mm shift at acquisition parameters commonly used for fMRI and was reduced to 1.5-3mm with DYNAMITE shimming. T2* values obtained from the prefrontal and temporal cortices with DYNAMITE shimming were 10-50% longer than those measured with SH shimming. The reduction of the confounding macroscopic B0 field gradients with DYNAMITE shimming thereby promises improved access to the relevant microscopic T2* effects. The combination of high spatial resolution and DYNAMITE shimming allows largely artifact-free EPI and T2* mapping throughout the brain, including prefrontal and temporal lobe areas. DYNAMITE shimming is expected to critically benefit a wide range of MRI applications that rely on excellent B0 magnetic field conditions including EPI-based fMRI to study various cognitive processes and assessing large-scale brain connectivity in vivo. As such, DYNAMITE shimming has the potential to replace conventional SH shim systems in human MR scanners.

In vivo O-Space imaging with a dedicated 12 cm Z2 insert coil on a human 3T scanner using phase map calibration.

Recently, spatial encoding with nonlinear magnetic fields has drawn attention for its potential to achieve faster gradient switching within safety limits, tailored resolution in regions of interest, and improved parallel imaging using encoding fields that complement the sensitivity profiles of radio frequency receive arrays. Proposed methods can broadly be divided into those that use phase encoding (Cartesian‐trajectory PatLoc and COGNAC) and those that acquire nonlinear projections (O‐Space, Null space imaging, radial PatLoc, and 4D‐RIO). Nonlinear projection data are most often reconstructed with iterative algorithms that backproject data using the full encoding matrix. Just like conventional radial sequences that use linear spatial encoding magnetic fields, nonlinear projection methods are more sensitive than phase encoding methods to imperfect calibration of the encoding fields. In this work, voxel‐wise phase evolution is mapped at each acquired point in an O‐Space trajectory using a variant of chemical shift imaging, capturing all spin dynamics caused by encoding fields, eddy currents, and pulse timing. Phase map calibration is then applied to data acquired from a high‐power, 12 cm, Z2 insert coil with an eight‐channel radio frequency transmit‐receive array on a 3T human scanner. We show the first experimental proof‐of‐concept O‐Space images on in vivo and phantom samples, paving the way for more in‐depth exploration of O‐Space and similar imaging methods. Magn Reson Med, 2013.

Compensation of gradient-induced magnetic field perturbations.

Pulsed magnetic field gradients are essential for MR imaging and localized spectroscopy applications. However, besides the desired linear field gradients, pulsed currents in a strong external magnetic field also generate unwanted effects like eddy currents, gradient coil vibrations and acoustic noise. While the temporal magnetic field perturbations associated with eddy currents lead to spectral line shape distortions and signal loss, the vibration-related modulations lead to anti-symmetrical sidebands of any large signal (i.e. water), thereby obliterating the signals from low-concentration metabolites. Here the measurement, characterization and compensation of vibration-related magnetic field perturbations is presented. Following a quantitative evaluation of the various temporal components of the main magnetic field, a digital B0 magnetic field waveform is generated which reduces all temporal variations of the main magnetic field to within the spectral noise level.