Terumi Mukai

Variance component analysis for viability in an isolated population of Drosophila melanogaster

Using the 602 second chromosome lines extracted from the Ishigakijima population of Drosophila melanogaster in Japan, partial diallel cross experiments (Design II of Comstock & Robinson, 1952) were carried out, and the additive genetic variance and the dominance variance of viability were estimated. The estimated value of the additive genetic variance is 001754 + 000608, and the dominance variance 000151 ±000114, using a logarithmic scale. Since the value of the additive genetic variance is much larger than expected under mutation-selection balance although the dominance variance is compatible with it, we speculate that in the Ishigakijima population some type of balancing selection must be operating to maintain the genetic variability with respect to viability at a minority of loci. As candidates for such selection, overdominance, frequency-dependent selection, and diversifying selection are considered, and it is suggested that diversifying selection is the most probable candidate for increasing the additive genetic variance.

The rare inversion with a P element at the breakpoint maintained in a natural population of Drosophila melanogaster

We found a rare inversion which is superimposed on the In (2R) NS chromosome. It has been maintained for several years in the Raleigh, N. C., USA population and possibly for more than ten years in the southern populations of the USA. Both the breakpoint of the rare inversion and the corresponding site of the In (2R) NS chromosome have P elements and therefore, the rare inversion might be induced by P element activity in a natural population.

Restriction map and α-amylase activity variation among Drosophila mutation accumulation lines

The specific activities of alpha-amylase were measured for two sets of mutation accumulation lines, each set having originated from a different lethal-carrying second chromosome and SM1(Cy) chromosome and having been maintained by a balanced lethal system for about 300 generations. Significant variation was found to have accumulated among lines of both sets. Because of dysgenic crosses in the early generations of mutation accumulation, insertions or deletions of transposable elements in the Amy gene region were suspected of being the cause of this variation. In order to test this possibility, the structural changes in the 14 kb region of these chromosomes that includes the structural genes for alpha-amylase were investigated by restriction map analysis. We found that most part of the activity variation is due to replacements of a chromosomal region of SM1(Cy), including the structural genes for alpha-amylase, by the corresponding regions of the lethal chromosomes. One line also contained an insertion in this region but this line has an intermediate activity value. Thus, insertions of transposable elements into the Amy gene region were not found to be responsible for the new variation observed in alpha-amylase activity. If we remove those lines with structural changes from the analysis, the genetic variance of alpha-amylase specific activity among lines becomes non-significant in both sets of chromosomes.

Gene Duplication and Concerted Evolution of the GPDH Locus in Natural Populations of Drosophila melanogaster

The sn-glycerol-3-phosphate dehydrogenase (GPDH, EC 1, 1, 1, 8) locus of Drosophila melanogaster is polymorphic with respect to the number of tandemly duplicated genes in natural populations. The duplicated genes were cloned and the nucleotide sequences were determined. The duplication deletes both the first and second exons and has a size of 4500 b. p. The fact that there is no sequence variation at the junction point of the duplicated units among strains suggests a single origin for the duplication event. Comparison of the nucleotide sequences among the duplicates indicates that the frequent transfer of genetic information occurs from one to the other of the duplicates on the same chromosome either by gene conversion or by unequal crossing over. Because the GPDH duplication is partial and therefore a kind of pseudogene, the observed polymorphism of the number of tandemly duplicated GPDH genes appears to have been driven mainly by random genetic drift.

A type of incompatibility between genes and their genetic background inducing decrease in heterozygote viability approximately equal to that of homozygotes, found in a natural population of Drosophila

In the Osaka population of Drosophila melanogaster, we found an incompatibility between second chromosomes and their genetic backgrounds, where a decrease in the average viability of heterozygotes in the foreign genetic background relative to that of the native one (A′/A = 0.889) was about equal to that in non-lethal homozygotes (C′/C = 0.874). This feature is different from that of the incompatibility found in the Ishigakijima population, where little difference in average viabilities of heterozygotes between the native and foreign backgrounds was found, whereas in mean non-lethal homozygotes viabilities a large decrease was seen. This feature is supposed to be induced by the P-M hybrid dysgenesis, as strong P-transposase activity was shown in this population with the GD sterility test. Although a property similar to that of the Osaka population had been detected in the Katsunuma population, an increased frequency of the lethal-carrying chromosomes had been found in the foreign genetic background relative to the native one, and was not seen in the Osaka population.

A method for detecting effect of beneficial mutations in natural populations of Drosophila melanogaster.

An experimental method is proposed for detecting the effects of positive natural selection on DNA polymorphisms. Since beneficial mutations are expected to increase in frequency faster than neutral mutations, variants which have reached high frequencies in a relatively short period could be linked to some beneficial mutation. D. melanogaster has a cosmopolitan polymorphic inversion -In(2L)t- whose age in some local populations has been estimated. Setting the age of In(2L)t as the upper limit for the age of variants, we searched for variants whose frequencies were possibly influenced by positive natural selection. We detected a single candidate whose frequency and distribution met the requirements imposed by our method.