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Dive into the research topics where Thomas McDonagh is active.

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Featured researches published by Thomas McDonagh.


PLOS Biology | 2005

Sirt1 regulates insulin secretion by repressing UCP2 in pancreatic beta cells.

Laura Bordone; Maria Carla Motta; Frédéric Picard; Ashley Robinson; Ulupi S. Jhala; Javier Apfeld; Thomas McDonagh; Madeleine E. Lemieux; Michael W. McBurney; Akos Szilvasi; Erin Easlon; Su Ju Lin; Leonard Guarente

Sir2 and insulin/IGF-1 are the major pathways that impinge upon aging in lower organisms. In Caenorhabditis elegans a possible genetic link between Sir2 and the insulin/IGF-1 pathway has been reported. Here we investigate such a link in mammals. We show that Sirt1 positively regulates insulin secretion in pancreatic β cells. Sirt1 represses the uncoupling protein (UCP) gene UCP2 by binding directly to the UCP2 promoter. In β cell lines in which Sirt1 is reduced by SiRNA, UCP2 levels are elevated and insulin secretion is blunted. The up-regulation of UCP2 is associated with a failure of cells to increase ATP levels after glucose stimulation. Knockdown of UCP2 restores the ability to secrete insulin in cells with reduced Sirt1, showing that UCP2 causes the defect in glucose-stimulated insulin secretion. Food deprivation induces UCP2 in mouse pancreas, which may occur via a reduction in NAD (a derivative of niacin) levels in the pancreas and down-regulation of Sirt1. Sirt1 knockout mice display constitutively high UCP2 expression. Our findings show that Sirt1 regulates UCP2 in β cells to affect insulin secretion.


Protein Science | 2008

Crystal structures of the two major aggrecan degrading enzymes, ADAMTS4 and ADAMTS5

Lidia Mosyak; Katy E. Georgiadis; Tania Shane; Kristine Svenson; Tracy Hebert; Thomas McDonagh; Stewart Mackie; Stephane Olland; Laura Lin; Xiaotian Zhong; Ronald W. Kriz; Erica Reifenberg; Lisa A. Collins-Racie; Christopher John Corcoran; Bethany A. Freeman; Richard Zollner; Tod Marvell; Matthew Vera; Phaik-Eng Sum; Edward R. Lavallie; Mark Stahl; William Stuart Somers

Aggrecanases are now believed to be the principal proteinases responsible for aggrecan degradation in osteoarthritis. Given their potential as a drug target, we solved crystal structures of the two most active human aggrecanase isoforms, ADAMTS4 and ADAMTS5, each in complex with bound inhibitor and one wherein the enzyme is in apo form. These structures show that the unliganded and inhibitor‐bound enzymes exhibit two essentially different catalytic‐site configurations: an autoinhibited, nonbinding, closed form and an open, binding form. On this basis, we propose that mature aggrecanases exist as an ensemble of at least two isomers, only one of which is proteolytically active.


Journal of Biological Chemistry | 2005

SIRT1 Shows No Substrate Specificity in Vitro

Gil Blander; Jerzy Olejnik; Edyta Krzymanska-Olejnik; Thomas McDonagh; Marcia C. Haigis; Michael B. Yaffe; Leonard Guarente

SIR2 is a key regulator of the aging process in many model organisms. The human ortholog SIRT1 plays a pivotal role in the regulation of cellular differentiation, metabolism, cell cycle, and apoptosis. SIRT1 is an NAD+-dependent deacetylase, and its enzymatic activity may be regulated by cellular energy. There is a growing number of known SIRT1 substrates that contain ϵ-acetyl lysine but for which no obvious consensus sequence has been defined. In this study, we developed a novel unbiased method to identify deacetylase sequence specificity using oriented peptide libraries containing acetylated lysine. Following incubation with SIRT1, the subset of deacetylated peptides was selectively captured using a photocleavable N-hydroxysuccinimide (NHS)-biotin linker and streptavidin beads and analyzed using mass spectrometry and Edman degradation. These studies revealed that substrate recognition by SIRT1 does not depend on the amino acid sequence proximate to the acetylated lysine. This result brings us one step closer to understanding how SIRT1 and possibly other protein deacetylases chose their substrate.


Future Medicinal Chemistry | 2010

SIRT1-independent mechanisms of the putative sirtuin enzyme activators SRT1720 and SRT2183.

Julie L Huber; Michael W. McBurney; Peter S. DiStefano; Thomas McDonagh

BACKGROUND SRT1720 and SRT2183 were described recently as activators of the NAD+-dependent deacetylase, SIRT1. These molecules enhanced metabolic function when administered to rodents at doses of 100-500 mg/kg/day, purportedly by activating SIRT1 enzymatic activity in various tissues; however, considerable controversy surrounds these claims. RESULTS We find that these molecules do not activate SIRT1 deacetylase activity when tested in a variety of enzymatic assay formats and conditions. The compounds effectively decrease acetylated p53 in cells treated with DNA damaging agents but do so in cells that lack SIRT1, calling into question their designation as direct activators of SIRT1. In contrast, we find that the compounds inhibit p300 histone acetyltransferase activity in vitro, suggesting a possible mechanism for their effects in vivo. CONCLUSION Structural features of these molecules may account for false-positive activation using fluorescence-based assays.


Journal of Pharmacology and Experimental Therapeutics | 2011

Pharmacologic inhibition of ghrelin receptor signaling is insulin sparing and promotes insulin sensitivity

Kenneth A. Longo; Elizabeth Govek; Anna Nolan; Thomas McDonagh; Soratree Charoenthongtrakul; Derek J. Giuliana; Kristen Morgan; Jeffrey Hixon; Chaoseng Zhou; Bruce Kelder; John J. Kopchick; Jeffrey O. Saunders; Manuel A. Navia; Rory Curtis; Peter S. DiStefano; Bradley Geddes

Ghrelin influences a variety of metabolic functions through a direct action at its receptor, the GhrR (GhrR-1a). Ghrelin knockout (KO) and GhrR KO mice are resistant to the negative effects of high-fat diet (HFD) feeding. We have generated several classes of small-molecule GhrR antagonists and evaluated whether pharmacologic blockade of ghrelin signaling can recapitulate the phenotype of ghrelin/GhrR KO mice. Antagonist treatment blocked ghrelin-induced and spontaneous food intake; however, the effects on spontaneous feeding were absent in GhrR KO mice, suggesting target-specific effects of the antagonists. Oral administration of antagonists to HFD-fed mice improved insulin sensitivity in both glucose tolerance and glycemic clamp tests. The insulin sensitivity observed was characterized by improved glucose disposal with dramatically decreased insulin secretion. It is noteworthy that these results mimic those obtained in similar tests of HFD-fed GhrR KO mice. HFD-fed mice treated for 56 days with antagonist experienced a transient decrease in food intake but a sustained body weight decrease resulting from decreased white adipose, but not lean tissue. They also had improved glucose disposal and a striking reduction in the amount of insulin needed to achieve this. These mice had reduced hepatic steatosis, improved liver function, and no evidence of systemic toxicity relative to controls. Furthermore, GhrR KO mice placed on low- or high-fat diets had lifespans similar to the wild type, emphasizing the long-term safety of ghrelin receptor blockade. We have therefore demonstrated that chronic pharmacologic blockade of the GhrR is an effective and safe strategy for treating metabolic syndrome.


PLOS Biology | 2006

Correction: Sirt1 Regulates Insulin Secretion by Repressing UCP2 in Pancreatic β Cells.

Laura Bordone; Maria Carla Motta; Frédéric Picard; Ashley Robinson; Ulupi S. Jhala; Javier Apfeld; Thomas McDonagh; Madeleine E. Lemieux; Michael W. McBurney; Akos Szilvasi; Erin Easlon; Su Ju Lin; Leonard Guarente

The authors would like to clarify that the controls previously depicted in Figs ​Figs4E4E and ​and7A7A were for different experiments and were included in error. Fig 4 UCP2 is Up-Regulated in Sirt1 Knockdown Cells and in Sirt1 KO Mice. Fig 7 UCP2 mRNA or Protein Levels in Fed or Starved Wild-Type Mice. The correct control for Fig 4E was located and used to prepare a corrected figure. The correct control for the original Fig 7A could not be located; this panel has therefore been removed after a careful assessment and investigation determined that the result for which original Fig 7A was cited is supported elsewhere in this article, and that removal of this panel does not affect the conclusions of the paper. We have also taken this opportunity to provide new versions of several figures (Figs ​(Figs4,4, ​,5,5, ​,6,6, ​,7)7) in which gel/blot splices and a non-linear level adjustment were made but were not previously indicated or declared, or to replace incorrectly spliced gels/blots with the un-spliced originals. We also take the opportunity to correct two errors in the legend to Fig 6, first to remove a redundant and incorrect sentence, and second to address incorrect description of p values. Fig 5 Sirt1 Binds at the UCP2 Promoter and Represses the Gene. Fig 6 Knockdown of UCP2 in Sirt1 Knockdown Cells Restores Glucose-Induced Insulin Secretion. The text in the Results section titled “UCP2 Levels Increase in Food-Deprived Mice” has been edited to accommodate the removal of the original Fig 7A and the relabeling of Fig 7B, 7C and 7D as Fig 7A, 7B and 7C, respectively. The corrected text and Figs ​Figs4,4, ​,5,5, ​,66 and ​and77 are provided here.


Journal of Biological Chemistry | 2004

Crystal Structure of the Wild-type von Willebrand Factor A1-Glycoprotein Ibα Complex Reveals Conformation Differences with a Complex Bearing von Willebrand Disease Mutations

John J. Dumas; Ravindra Kumar; Thomas McDonagh; Francis X. Sullivan; Mark L. Stahl; William S. Somers; Lidia Mosyak


Journal of Biological Chemistry | 2002

Autocatalytic Cleavage of ADAMTS-4 (Aggrecanase-1) Reveals Multiple Glycosaminoglycan-binding Sites

Carl R. Flannery; Weilan Zeng; Christopher John Corcoran; Lisa A. Collins-Racie; Priya S. Chockalingam; Tracy Hebert; Stewart Mackie; Thomas McDonagh; Tara K. Crawford; Kathy Tomkinson; Edward R. Lavallie; Elisabeth A. Morris


Journal of Biological Chemistry | 2002

ADAMTS4 Cleaves at the Aggrecanase Site (Glu373-Ala374) and Secondarily at the Matrix Metalloproteinase Site (Asn341-Phe342) in the Aggrecan Interglobular Domain

Jennifer Westling; Amanda J. Fosang; Vivian Thompson; Kathy Tomkinson; Tracy Hebert; Thomas McDonagh; Lisa A. Collins-Racie; Edward R. Lavallie; Elisabeth A. Morris; John D. Sandy


Archive | 2004

Methods of treating a disorder

Andrew Napper; Peter S. DiStefano; Jeffrey Hixon; Thomas McDonagh; Rory Curtis

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Jeffrey Hixon

Fred Hutchinson Cancer Research Center

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Andrew Napper

Fred Hutchinson Cancer Research Center

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Edward R. Lavallie

University of South Florida

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Leonard Guarente

Massachusetts Institute of Technology

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Ashley Robinson

Massachusetts Institute of Technology

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Erin Easlon

University of California

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