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Dive into the research topics where Timothy Bonnici is active.

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Featured researches published by Timothy Bonnici.


IEEE Journal of Biomedical and Health Informatics | 2015

Signal-Quality Indices for the Electrocardiogram and Photoplethysmogram: Derivation and Applications to Wireless Monitoring

Christina Orphanidou; Timothy Bonnici; Peter Charlton; David A. Clifton; David Vallance; Lionel Tarassenko

The identification of invalid data in recordings obtained using wearable sensors is of particular importance since data obtained from mobile patients is, in general, noisier than data obtained from nonmobile patients. In this paper, we present a signal quality index (SQI), which is intended to assess whether reliable heart rates (HRs) can be obtained from electrocardiogram (ECG) and photoplethysmogram (PPG) signals collected using wearable sensors. The algorithms were validated on manually labeled data. Sensitivities and specificities of 94% and 97% were achieved for the ECG and 91% and 95% for the PPG. Additionally, we propose two applications of the SQI. First, we demonstrate that, by using the SQI as a trigger for a power-saving strategy, it is possible to reduce the recording time by up to 94% for the ECG and 93% for the PPG with only minimal loss of valid vital-sign data. Second, we demonstrate how an SQI can be used to reduce the error in the estimation of respiratory rate (RR) from the PPG. The performance of the two applications was assessed on data collected from a clinical study on hospital patients who were able to walk unassisted.


wearable and implantable body sensor networks | 2012

Testing of Wearable Monitors in a Real-World Hospital Environment: What Lessons Can Be Learnt?

Timothy Bonnici; Christina Orphanidou; David Vallance; Alexander Darrell; Lionel Tarassenko

If wearable sensors are to play a significant role in monitoring the vital signs of hospitalised patients they need to be accepted by doctors and other healthcare workers. To gain this acceptance, evidence of their effectiveness needs to be demonstrated in clinical trials. In this pragmatic feasibility study four commercially-available, CE-marked sensors were combined into three monitoring systems and used to record the electrocardiograms (ECGs) and photoplethysmograms (PPGs) of 31 hospitalised patients, to determine whether the sensors could collect vital sign data reliably enough for use in larger clinical trials. Patients were asked to wear the sensors for 24 hours. Out of the 31 studies, on only 3 occasions did any of the monitoring systems manage to record both ECG and PPG data for the full 24-hour duration. The causes for the failure of sensors to record data from in-hospital patients consistently are discussed and a clinical perspective is given on the design features needed for a sensor to be usable in a hospital setting.


Physiological Measurement | 2016

An assessment of algorithms to estimate respiratory rate from the electrocardiogram and photoplethysmogram.

Peter Charlton; Timothy Bonnici; Lionel Tarassenko; David A. Clifton; Richard Beale; Peter Watkinson

Abstract Over 100 algorithms have been proposed to estimate respiratory rate (RR) from the electrocardiogram (ECG) and photoplethysmogram (PPG). As they have never been compared systematically it is unclear which algorithm performs the best. Our primary aim was to determine how closely algorithms agreed with a gold standard RR measure when operating under ideal conditions. Secondary aims were: (i) to compare algorithm performance with IP, the clinical standard for continuous respiratory rate measurement in spontaneously breathing patients; (ii) to compare algorithm performance when using ECG and PPG; and (iii) to provide a toolbox of algorithms and data to allow future researchers to conduct reproducible comparisons of algorithms. Algorithms were divided into three stages: extraction of respiratory signals, estimation of RR, and fusion of estimates. Several interchangeable techniques were implemented for each stage. Algorithms were assembled using all possible combinations of techniques, many of which were novel. After verification on simulated data, algorithms were tested on data from healthy participants. RRs derived from ECG, PPG and IP were compared to reference RRs obtained using a nasal-oral pressure sensor using the limits of agreement (LOA) technique. 314 algorithms were assessed. Of these, 270 could operate on either ECG or PPG, and 44 on only ECG. The best algorithm had 95% LOAs of  −4.7 to 4.7 bpm and a bias of 0.0 bpm when using the ECG, and  −5.1 to 7.2 bpm and 1.0 bpm when using PPG. IP had 95% LOAs of  −5.6 to 5.2 bpm and a bias of  −0.2 bpm. Four algorithms operating on ECG performed better than IP. All high-performing algorithms consisted of novel combinations of time domain RR estimation and modulation fusion techniques. Algorithms performed better when using ECG than PPG. The toolbox of algorithms and data used in this study are publicly available.


Clinical Medicine | 2013

The digital patient

Timothy Bonnici; Lionel Tarassenko; David A. Clifton; Peter Watkinson

Despite efforts, the detection of patients who are deteriorating in hospital is often later than it should be. Several technologies could provide the basis of a solution. Recording of vital signs could be improved by both automated transmission of the measured parameters to an electronic patient record and the use of unobtrusive wearable monitors that track the patients physiology continuously. Electronic charting systems could make the recorded vital signs readily available for further processing. Software algorithms could identify such patients with greater sensitivity and specificity than the existing, paper-based track-and-trigger systems. Electronic storage of vital signs also makes intelligent alerting and remote patient surveillance possible. However, the potential of these technologies depends strongly on implementation, with poor-quality deployment likely to worsen patient care.


Physiological Measurement | 2017

Extraction of respiratory signals from the electrocardiogram and photoplethysmogram: technical and physiological determinants.

Peter Charlton; Timothy Bonnici; Lionel Tarassenko; Jordi Alastruey; David A. Clifton; Richard Beale; Peter Watkinson

OBJECTIVE Breathing rate (BR) can be estimated by extracting respiratory signals from the electrocardiogram (ECG) or photoplethysmogram (PPG). The extracted respiratory signals may be influenced by several technical and physiological factors. In this study, our aim was to determine how technical and physiological factors influence the quality of respiratory signals. APPROACH Using a variety of techniques 15 respiratory signals were extracted from the ECG, and 11 from PPG signals collected from 57 healthy subjects. The quality of each respiratory signal was assessed by calculating its correlation with a reference oral-nasal pressure respiratory signal using Pearsons correlation coefficient. MAIN RESULTS Relevant results informing device design and clinical application were obtained. The results informing device design were: (i) seven out of 11 respiratory signals were of higher quality when extracted from finger PPG compared to ear PPG; (ii) laboratory equipment did not provide higher quality of respiratory signals than a clinical monitor; (iii) the ECG provided higher quality respiratory signals than the PPG; (iv) during downsampling of the ECG and PPG significant reductions in quality were first observed at sampling frequencies of  <250 Hz and  <16 Hz respectively. The results informing clinical application were: (i) frequency modulation-based respiratory signals were generally of lower quality in elderly subjects compared to young subjects; (ii) the qualities of 23 out of 26 respiratory signals were reduced at elevated BRs; (iii) there were no differences associated with gender. SIGNIFICANCE Recommendations based on the results are provided regarding device designs for BR estimation, and clinical applications. The dataset and code used in this study are publicly available.


IEEE Reviews in Biomedical Engineering | 2018

Breathing Rate Estimation From the Electrocardiogram and Photoplethysmogram: A Review

Peter Charlton; Drew A. Birrenkott; Timothy Bonnici; Marco A. F. Pimentel; Alistair E. W. Johnson; Jordi Alastruey; Lionel Tarassenko; Peter Watkinson; Richard Beale; David A. Clifton

Breathing rate (BR) is a key physiological parameter used in a range of clinical settings. Despite its diagnostic and prognostic value, it is still widely measured by counting breaths manually. A plethora of algorithms have been proposed to estimate BR from the electrocardiogram (ECG) and pulse oximetry (photoplethysmogram, PPG) signals. These BR algorithms provide opportunity for automated, electronic, and unobtrusive measurement of BR in both healthcare and fitness monitoring. This paper presents a review of the literature on BR estimation from the ECG and PPG. First, the structure of BR algorithms and the mathematical techniques used at each stage are described. Second, the experimental methodologies that have been used to assess the performance of BR algorithms are reviewed, and a methodological framework for the assessment of BR algorithms is presented. Third, we outline the most pressing directions for future research, including the steps required to use BR algorithms in wearable sensors, remote video monitoring, and clinical practice.


BMC Medical Informatics and Decision Making | 2015

Evaluation of the effects of implementing an electronic early warning score system: protocol for a stepped wedge study

Timothy Bonnici; Stephen Gerry; David Wong; Julia Knight; Peter Watkinson

BackgroundAn Early Warning Score is a clinical risk score based upon vital signs intended to aid recognition of patients in need of urgent medical attention. The use of an escalation of care policy based upon an Early Warning Score is mandated as the standard of practice in British hospitals. Electronic systems for recording vital sign observations and Early Warning Score calculation offer theoretical benefits over paper-based systems. However, the evidence for their clinical benefit is limited. Previous studies have shown inconsistent results. The majority have employed a “before and after” study design, which may be strongly confounded by simultaneously occurring events. This study aims to examine how the implementation of an electronic early warning score system, System for Notification and Documentation (SEND), affects the recognition of clinical deterioration occurring in hospitalised adult patients.MethodsThis study is a non-randomised stepped wedge evaluation carried out across the four hospitals of the Oxford University Hospitals NHS Trust, comparing charting on paper and charting using SEND. We assume that more frequent monitoring of acutely ill patients is associated with better recognition of patient deterioration.The primary outcome measure is the time between a patient’s first observations set with an Early Warning Score above the alerting threshold and their subsequent set of observations. Secondary outcome measures are in-hospital mortality, cardiac arrest and Intensive Care admission rates, hospital length of stay and system usability measured using the System Usability Scale. We will also measure Intensive Care length of stay, Intensive Care mortality, Acute Physiology and Chronic Health Evaluation (APACHE) II acute physiology score on admission, to examine whether the introduction of SEND has any effect on Intensive Care-related outcomes.DiscussionThe development of this protocol has been informed by guidance from the Agency for Healthcare Research and Quality (AHRQ) Health Information Technology Evaluation Toolkit and Delone and McLeans’s Model of Information System Success. Our chosen trial design, a stepped wedge study, is well suited to the study of a phased roll out. The choice of primary endpoint is challenging. We have selected the time from the first triggering observation set to the subsequent observation set. This has the benefit of being easy to measure on both paper and electronic charting and having a straightforward interpretation. We have collected qualitative measures of system quality via a user questionnaire and organisational descriptors to help readers understand the context in which SEND has been implemented.


bioinformatics and bioengineering | 2012

A method for assessing the reliability of heart rates obtained from ambulatory ECG

Christina Orphanidou; Timothy Bonnici; David Vallance; Alexander Darrell; Peter Charlton; Lionel Tarassenko

In this paper we present a method of assessing the reliability of heart rates (HRs) obtained from ambulatory ECGs. Our method assigns a Reliability Index (RI) to ECG segments based on a set of physiologically relevant rules prior to using a template matching approach. We validated the algorithm on 1500 manually annotated samples of ECG taken from two different studies and using three different sensors at different sampling rates. The sensitivity of our method was 98% and the specificity was 94%. Our method matched or was more conservative than the human annotations in 99.4% of the samples, making it a promising tool for inclusion in next-generation wearable sensors.


BMJ Open | 2017

Early warning scores for detecting deterioration in adult hospital patients: a systematic review protocol

Stephen Gerry; Jacqueline Birks; Timothy Bonnici; Peter Watkinson; Shona Kirtley; Gary S. Collins

Introduction Early warning scores (EWSs) are used extensively to identify patients at risk of deterioration in hospital. Previous systematic reviews suggest that studies which develop EWSs suffer methodological shortcomings and consequently may fail to perform well. The reviews have also identified that few validation studies exist to test whether the scores work in other settings. We will aim to systematically review papers describing the development or validation of EWSs, focusing on methodology, generalisability and reporting. Methods We will identify studies that describe the development or validation of EWSs for adult hospital inpatients. Each study will be assessed for risk of bias using the Prediction model Risk of Bias ASsessment Tool (PROBAST). Two reviewers will independently extract information. A narrative synthesis and descriptive statistics will be used to answer the main aims of the study which are to assess and critically appraise the methodological quality of the EWS, to describe the predictors included in the EWSs and to describe the reported performance of EWSs in external validation. Ethics and dissemination This systematic review will only investigate published studies and therefore will not directly involve patient data. The review will help to establish whether EWSs are fit for purpose and make recommendations to improve the quality of future research in this area. PROSPERO registration number CRD42017053324.


STEM for Britain | 2018

Predicting Clinical Deteriorations using Wearable Sensors

Peter Charlton; Timothy Bonnici; Lionel Tarassenko; Peter Watkinson; David A. Clifton; Richard Beale; Jordi Alastruey-Arimon

Citing this paper Please note that where the full-text provided on Kings Research Portal is the Author Accepted Manuscript or Post-Print version this may differ from the final Published version. If citing, it is advised that you check and use the publishers definitive version for pagination, volume/issue, and date of publication details. And where the final published version is provided on the Research Portal, if citing you are again advised to check the publishers website for any subsequent corrections.

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