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Dive into the research topics where Timothy J. Larkin is active.

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Featured researches published by Timothy J. Larkin.


NMR in Biomedicine | 2013

Hyperpolarized singlet lifetimes of pyruvate in human blood and in the mouse

Irene Marco-Rius; Michael C. D. Tayler; Mikko I. Kettunen; Timothy J. Larkin; Kerstin N. Timm; Eva M. Serrao; Tiago B. Rodrigues; Giuseppe Pileio; Jan Henrik Ardenkjaer-Larsen; Malcolm H. Levitt; Kevin M. Brindle

Hyperpolarized NMR is a promising technique for non‐invasive imaging of tissue metabolism in vivo. However, the pathways that can be studied are limited by the fast T1 decay of the nuclear spin order. In metabolites containing pairs of coupled nuclear spins‐1/2, the spin order may be maintained by exploiting the non‐magnetic singlet (spin‐0) state of the pair. This may allow preservation of the hyperpolarization in vivo during transport to tissues of interest, such as tumors, or to detect slower metabolic reactions. We show here that in human blood and in a mouse in vivo at millitesla fields the 13C singlet lifetime of [1,2‐13C2]pyruvate was significantly longer than the 13C T1, although it was shorter than the T1 at field strengths of several tesla. We also examine the singlet‐derived NMR spectrum observed for hyperpolarized [1,2‐13C2]lactate, originating from the metabolism of [1,2‐13C2]pyruvate.


Magnetic Resonance in Medicine | 2014

Analysis of image heterogeneity using 2D Minkowski functionals detects tumor responses to treatment.

Timothy J. Larkin; Holly C. Canuto; Mikko I. Kettunen; T.C. Booth; De-En Hu; Anant Krishnan; Sarah E. Bohndiek; Andr e A. Neves; Charles McLachlan; Michael P. Hobson; Kevin M. Brindle

The acquisition of ever increasing volumes of high resolution magnetic resonance imaging (MRI) data has created an urgent need to develop automated and objective image analysis algorithms that can assist in determining tumor margins, diagnosing tumor stage, and detecting treatment response.


The Journal of Nuclear Medicine | 2014

Late Imaging with (1- 11 C)Acetate Improves Detection of Tumor Fatty Acid Synthesis with PET

David Lewis; Joan Boren; Greg Shaw; Robert Bielik; Antonio Ramos-Montoya; Timothy J. Larkin; Carla P. Martins; David E. Neal; Dmitry Soloviev; Kevin M. Brindle

Tumors are often characterized by high levels of de novo fatty acid synthesis. The kinetics of acetate incorporation into tricarboxylic acid cycle intermediates and into lipids suggest that detection of tumors with [1-11C]acetate PET could be improved by imaging at later time points. Methods: The uptake and metabolism of [1-11C], [1-13C], and [1-14C]acetate were measured in mouse prostate and lung cancer models to investigate the time course of 11C label incorporation into tumor metabolites. Results: Radioactivity in the lipid fraction, as compared with the aqueous fraction, in extracts of C4-2B human prostate xenografts peaked at 90 min after [1-14C]acetate injection, which coincided with peak 13C label incorporation into the fatty acids palmitate and stearate. Contrast between the tumor and tissues, such as blood and muscle, increased in PET images acquired over a period of 120 min after [1-11C]acetate injection, and Patlak plots were linear from 17.5 min after injection. Similar results were obtained in a genetically engineered K-rasG12D; p53null lung cancer model, in which the mean tumor-to-lung ratio at 90 min after [1-14C]acetate injection was 4.4-fold higher than at 15 min. Conclusion: These findings suggest that when imaging de novo fatty acid synthesis with [1-11C]acetate it is preferable to measure uptake at later time points, when the effects of perfusion and 11C incorporation into tricarboxylic acid cycle intermediates and bicarbonate are declining. The data presented here suggest that future clinical PET scans of tumors should be acquired later than 30 min, when tracer accumulation due to de novo fatty acid synthesis prevails.


Magnetic Resonance in Medicine | 2015

(13) C magnetic resonance spectroscopic imaging of hyperpolarized [1-(13) C, U-(2) H5 ] ethanol oxidation can be used to assess aldehyde dehydrogenase activity in vivo.

Piotr Dzien; Mikko I. Kettunen; Irene Marco-Rius; Eva M. Serrao; Tiago B. Rodrigues; Timothy J. Larkin; Kerstin N. Timm; Kevin M. Brindle

Aldehyde dehydrogenase (ALDH2) is an emerging drug target for the treatment of heart disease, cocaine and alcohol dependence, and conditions caused by genetic polymorphisms in ALDH2. Noninvasive measurement of ALDH2 activity in vivo could inform the development of these drugs and accelerate their translation to the clinic.


Journal of Magnetic Resonance Imaging | 2016

Multimodal MRI can identify perfusion and metabolic changes in the invasive margin of glioblastomas

Stephen J. Price; Adam Young; William J. Scotton; Jared Ching; Laila A. Mohsen; Natalie R. Boonzaier; Victoria Lupson; John R. Griffiths; Mary Anne McLean; Timothy J. Larkin

To use perfusion and magnetic resonance (MR) spectroscopy to compare the diffusion tensor imaging (DTI)‐defined invasive and noninvasive regions. Invasion of normal brain is a cardinal feature of glioblastomas (GBM) and a major cause of treatment failure. DTI can identify invasive regions.


Radiology | 2017

Multiparametric MR Imaging of Diffusion and Perfusion in Contrast-enhancing and Nonenhancing Components in Patients with Glioblastoma

Natalie R. Boonzaier; Timothy J. Larkin; Tomasz Matys; Anouk van der Hoorn; Jiun-Lin Yan; Stephen J. Price

Purpose To determine whether regions of low apparent diffusion coefficient (ADC) with high relative cerebral blood volume (rCBV) represented elevated choline (Cho)-to-N-acetylaspartate (NAA) ratio (hereafter, Cho/NAA ratio) and whether their volumes correlated with progression-free survival (PFS) and overall survival (OS) in patients with glioblastoma (GBM). Materials and Methods This retrospective analysis was approved by the local research ethics committee. Volumetric analysis of imaging data from 43 patients with histologically confirmed GBM was performed. Patients underwent preoperative 3-T magnetic resonance imaging with conventional, diffusion-weighted, perfusion-weighted, and spectroscopic sequences. Patients underwent subsequent surgery with adjuvant chemotherapy and radiation therapy. Overlapping low-ADC and high-rCBV regions of interest (ROIs) (hereafter, ADC-rCBV ROIs) were generated in contrast-enhancing and nonenhancing regions. Cho/NAA ratio in ADC-rCBV ROIs was compared with that in control regions by using analysis of variance. All resulting ROI volumes were correlated with patient survival by using multivariate Cox regression. Results ADC-rCBV ROIs within contrast-enhancing and nonenhancing regions showed elevated Cho/NAA ratios, which were significantly higher than those in other abnormal tumor regions (P < .001 and P = .008 for contrast-enhancing and nonenhancing regions, respectively) and in normal-appearing white matter (P < .001 for both contrast-enhancing and nonenhancing regions). After Cox regression analysis controlling for age, tumor size, resection extent, O-6-methylguanine-DNA methyltransferase-methylation, and isocitrate dehydrogenase mutation status, the proportional volume of ADC-rCBV ROIs in nonenhancing regions significantly contributed to multivariate models of OS (hazard ratio, 1.132; P = .026) and PFS (hazard ratio, 1.454; P = .017). Conclusion Volumetric analysis of ADC-rCBV ROIs in nonenhancing regions of GBM can be used to identify patients with poor survival trends after accounting for known confounders of GBM patient outcome.


European Biophysics Journal | 2009

Erythrocyte orientational and cell volume effects on NMR q-space analysis: simulations of restricted diffusion.

Timothy J. Larkin; Philip W. Kuchel

Pulsed field-gradient spin echo nuclear magnetic resonance spectroscopy of water diffusing in erythrocytes leads to diffusion interference and diffraction effects, which are visualised in q-space plots of signal intensity versus the magnitude of the spatial wave-number vector q. Interpretation of the features of these q-space plots has been aided by Monte Carlo random walk simulations of diffusion in lattices of virtual erythrocytes. Here, the effect of varying the orientation of the cells with respect to the direction in which diffusion is measured, on the appearance of q-space plots, was investigated, together with the effect of changing the cell volume. We show that these changes are reflected in the appearance of the plots in a way that is diagnostic of the microscopic geometry of the sample.


Journal of Physical Chemistry B | 2008

Inhomogeneous NMR line shape as a probe of microscopic organization of bicontinuous cubic phases

Konstantin I. Momot; K. Takegoshi; Philip W. Kuchel; Timothy J. Larkin

NMR line shapes of the lipid and aqueous species in bicontinuous cubic phase (BCP) samples prepared by centrifugation are inhomogeneously broadened. The broadening of the lipid peaks is removed by magic-angle spinning (MAS). In this work, we studied the mechanism of this broadening using (1)H and (13)C NMR spectroscopy of a myverol/water BCP. It is demonstrated that the inhomogeneity possesses an intrinsic contribution that is independent of instrumental or setup factors and can be attributed to the microscopic organization of the BCP bilayer. A mechanism of the inhomogeneous broadening is proposed, which involves a spatially nonuniform diamagnetically induced magnetic field determined by the mesoscopic structure and the diamagnetic susceptibilities of the two BCP domains. The proposed mechanism does not require that molecular reorientation of the lipid be slow for the inhomogeneous broadening to survive. We discuss how this inhomogeneous broadening can be employed as a probe of compositional uniformity and microscopic organization of BCP samples.


Magnetic Resonance in Medicine | 2016

(13) C magnetic resonance spectroscopy measurements with hyperpolarized [1-(13) C] pyruvate can be used to detect the expression of transgenic pyruvate decarboxylase activity in vivo.

Piotr Dzien; Sui-Seng Tee; Mikko I. Kettunen; Scott K. Lyons; Timothy J. Larkin; Kerstin N. Timm; De-En Hu; Alan J. Wright; Tiago B. Rodrigues; Eva M. Serrao; Irene Marco-Rius; Elizabeth Mannion; Paula D'Santos; Brett W. C. Kennedy; Kevin M. Brindle

Dissolution dynamic nuclear polarization can increase the sensitivity of the 13C magnetic resonance spectroscopy experiment by at least four orders of magnitude and offers a novel approach to the development of MRI gene reporters based on enzymes that metabolize 13C‐labeled tracers. We describe here a gene reporter based on the enzyme pyruvate decarboxylase (EC 4.1.1.1), which catalyzes the decarboxylation of pyruvate to produce acetaldehyde and carbon dioxide.


Radiology | 2017

Less Invasive Phenotype Found in Isocitrate Dehydrogenase-mutated Glioblastomas than in Isocitrate Dehydrogenase Wild-Type Glioblastomas: A Diffusion-Tensor Imaging Study

Stephen J. Price; Kieren Allinson; Hongxiang Liu; Natalie R. Boonzaier; Jiun-Lin Yan; Victoria Lupson; Timothy J. Larkin

Purpose To explore the diffusion-tensor (DT) imaging-defined invasive phenotypes of both isocitrate dehydrogenase (IDH-1)-mutated and IDH-1 wild-type glioblastomas. Materials and Methods Seventy patients with glioblastoma were prospectively recruited and imaged preoperatively. All patients provided signed consent, and the local research ethics committee approved the study. Patients underwent surgical resection, and tumor samples underwent immunohistochemistry for IDH-1 R132H mutations. DT imaging data were coregistered to the anatomic magnetic resonance study and reconstructed to provide the anisotropic and isotropic components of the DT. The invasive phenotype was determined by using previously published criteria and correlated with IDH-1 mutation status by using the Freeman-Halton extension of the Fisher exact probability test. Results Nine patients had an IDH-1 mutation and 61 had IDH-1 wild type. All of the patients with IDH-1 mutation had a minimally invasive DT imaging phenotype. Among the IDH-1 wild-type tumors, 42 of 61 (69%) were diffusively invasive glioblastomas, 14 of 61 (23%) were locally invasive, and five of 61 (8%) were minimally invasive (P < .001). Conclusion IDH-mutated glioblastomas have a less invasive phenotype compared with IDH wild type. This finding may have implications for individualizing the extent of surgical resection and radiation therapy volumes.

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Jiun-Lin Yan

University of Cambridge

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Mikko I. Kettunen

University of Eastern Finland

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Tomasz Matys

University of Cambridge

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Adam Young

University of Cambridge

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