Timothy S. George

Plant mechanisms to optimise access to soil phosphorus.

Phosphorus (P) is an important nutrient required for plant growth and its management in soil is critical to ensure sustainable and profitable agriculture that has minimal impact on the environment. Although soils may contain a large amount of total P, only a small proportion is immediately available to plants. Australian soils often have low availability of P for plant growth and P-based fertilisers are, therefore, commonly used to correct P deficiency and to maintain productivity. For many soils, the sustained use of P fertiliser has resulted in an accumulation of total P, a proportion of which is in forms that are poorly available to most plants. The efficiency with which different P fertilisers are used in agricultural systems depends on their capacity to supply P in a soluble form that is available for plant uptake (i.e. as orthophosphate anions). In addition to fertiliser source, the availability of P in soil is influenced to a large extent by physico-chemical and biological properties of the soil. Plant access to soil P is further affected by root characteristics (e.g. rate of growth, specific root length, and density and length of root hairs) and biochemical processes that occur at the soil–root interface. The ability of roots to effectively explore soil, the release of exudates (e.g. organic anions and phosphatases) from roots that influence soil P availability, and the association of roots with soil microorganisms such as mycorrhizal fungi are particularly important. These processes occur as a natural response of plants to P deficiency and, through better understanding, may provide opportunities for improving plant access to soil and fertiliser P in conventional and organic agricultural systems.

Strategies and methods for studying the rhizosphere—the plant science toolbox

This review summarizes and discusses methodological approaches for studies on the impact of plant roots on the surrounding rhizosphere and for elucidation of the related mechanisms, covering a range from simple model experiments up to the field scale. A section on rhizosphere sampling describes tools and culture systems employed for analysis of root growth, root morphology, vitality testing and for monitoring of root activity with respect to nutrient uptake, water, ion and carbon flows in the rhizosphere. The second section on rhizosphere probing covers techniques to detect physicochemical changes in the rhizosphere as a consequence of root activity. This comprises compartment systems to obtain rhizosphere samples, visualisation techniques, reporter gene approaches and remote sensing technologies for monitoring the conditions in the rhizosphere. Approaches for the experimental manipulation of the rhizosphere by use of molecular and genetic methods as tools to study rhizosphere processes are discussed in a third section. Finally it is concluded that in spite of a wide array of methodological approaches developed in the recent past for studying processes and interactions in the rhizosphere mainly under simplified conditions in model experiments, there is still an obvious lack of methods to test the relevance of these findings under real field conditions or even on the scale of ecosystems. This also limits reliable data input and validation in current rhizosphere modelling approaches. Possible interactions between different environmental factors or plant-microbial interactions (e.g. mycorrhizae) are frequently not considered in model experiments. Moreover, most of the available knowledge arises from investigations with a very limited number of plant species, mainly crops and studies considering also intraspecific genotypic differences or the variability within wild plant species are just emerging.

Feeding nine billion: the challenge to sustainable crop production

In the recent past there was a widespread working assumption in many countries that problems of food production had been solved, and that food security was largely a matter of distribution and access to be achieved principally by open markets. The events of 2008 challenged these assumptions, and made public a much wider debate about the costs of current food production practices to the environment and whether these could be sustained. As in the past 50 years, it is anticipated that future increases in crop production will be achieved largely by increasing yields per unit area rather than by increasing the area of cropped land. However, as yields have increased, so the ratio of photosynthetic energy captured to energy expended in crop production has decreased. This poses a considerable challenge: how to increase yield while simultaneously reducing energy consumption (allied to greenhouse gas emissions) and utilizing resources such as water and phosphate more efficiently. Given the timeframe in which the increased production has to be realized, most of the increase will need to come from crop genotypes that are being bred now, together with known agronomic and management practices that are currently under-developed.

Potential and limitations to improving crops for enhanced phosphorus utilization

Phosphorus (P) is an essential element required for cellular function and when deficient has a significant impact on plant growth and fecundity. Poor availability of P in soil and consequent P-deficiency represents a major constraint to crop production globally (Runge-Metzger 1995). Soil P status is also a key factor that controls the competitive dynamics and species composition in different natural ecosystems (McGill and Cole 1981; Attiwill and Adams 1993), and thus may have significant impact on biodiversity (Wassen et al. 2005). Many plant species have evolved in P-limited environments and, as a consequence, are known to possess a number of adaptive features that can enhance the acquisition of P from soil (Raghothama 1999; Vance et al. 2003; Richardson et al. 2005). However, ongoing selection of crop cultivars, in nutrient replete environments, for traits such as yield and vigor (and thus an adaptation to optimal production systems), may have resulted in cultivars that have ‘lost’ adaptive traits that are required to cope with P-deficiency (Manske et al. 2000; Buso and Bliss 1988). Identification of such traits and their introduction into elite material from traditional cultivars, wild relatives and other species through modern approaches in breeding (e.g. marker-assisted selection and/or genetic manipulation) may provide new opportunities to improve the efficiency of P-uptake by crop plants. Phosphorus is taken up by plants as orthophosphate (Pi). In many soils the acquisition of P by plants is limited by low concentrations of Pi in soil solution, slow diffusion of Pi in soil, and the limited capacity for Pi to be replenished at the soil-root interface (Bieleski 1973). The paradox of this is that most soils contain large amounts of P that, if made more available, could sustain crop production for long periods with less dependence on P inputs (Harrison 1987). Phosphorus in soil is comprised of organic and inorganic P forms (Sanyal and De Datta 1991). The majority of the inorganic P is either adsorbed to soil constituents such as clays, sesquioxides and organic matter, or occurs in a range of precipitated mineral forms. Organic P generally accounts for around 50% of soil P, and is largely comprised of monoesters with lesser amounts of diesters and phosphonates (Newman and Tate 1980; Hawkes et al. 1984; Condron et al. 1990). Monoester P occurs predominantly

Impact of soil tillage on the robustness of the genetic component of variation in phosphorus (P) use efficiency in barley ( Hordeum vulgare L.)

To enhance the sustainability of agriculture it is imperative that the use of P-fertilisers by temperate cereal crops be improved. This can be achieved both by agronomic and genetic approaches. While many studies have demonstrated genotypic variation in P-use efficiency in a number of cereal species the robustness of this genetic variation in contrasting environments is rarely considered. In this paper we describe an experiment in which we compare the P-nutrition of winter and spring barley genotypes from an association genetic-mapping population grown in a field trial with different cultivation treatments (conventional plough vs. minimum tillage) which had been established over a number of years. We demonstrate that, while there is significant variation between genotypes in their P nutrition, this variation is not comparable between cultivation treatments and only one winter barley genotype (cv. Gleam) has beneficial P-use efficiency traits in both cultivation systems. Analysis of the association genetic-mapping population demonstrated that there was a strong environmental component in the genotypic variation, with more significant associations of shoot P concentration with known SNP (Single Nucleotide Polymorphism) markers when the population was grown in minimum tillage treatments. These data suggest that it may be possible to identify genetic components to variation in P nutrition in barley, but that a large interaction with environmental variables may limit the usefulness of any genes or markers discovered for improving P-use efficiency to the conditions under which the screening was performed.

Extracellular release of a heterologous phytase from roots of transgenic plants: does manipulation of rhizosphere biochemistry impact microbial community structure?

To maintain the sustainability of agriculture, it is imperative that the reliance of crops on inorganic phosphorus (P) fertilizers is reduced. One approach is to improve the ability of crop plants to acquire P from organic sources. Transgenic plants that produce microbial phytases have been suggested as a possible means to achieve this goal. However, neither the impact of heterologous expression of phytase on the ecology of microorganisms in the rhizosphere nor the impact of rhizosphere microorganisms on the efficacy of phytases in the rhizosphere of transgenic plants has been tested. In this paper, we demonstrate that the presence of rhizosphere microorganisms reduced the dependence of plants on extracellular secretion of phytase from roots when grown in a P-deficient soil. Despite this, the expression of phytase in transgenic plants had little or no impact on the microbial community structure as compared with control plant lines, whereas soil treatments, such as the addition of inorganic P, had large effects. The results demonstrate that soil microorganisms are explicitly involved in the availability of P to plants and that the microbial community in the rhizosphere appears to be resistant to the impacts of single-gene changes in plants designed to alter rhizosphere biochemistry and nutrient cycling.

Plant influence on nitrification

Modern agriculture has promoted the development of high-nitrification systems that are susceptible to major losses of nitrogen through leaching of nitrate and gaseous emissions of nitrogen oxide (NO and N2O), contributing to global warming and depletion of the ozone layer. Leakage of nitrogen from agricultural systems forces increased use of nitrogen fertilizers and causes water pollution and elevated costs of food production. Possible strategies for prevention of these processes involve various agricultural management approaches and use of synthetic inhibitors. Growing plants capable of producing nitrification suppressors could become a potentially superior method of controlling nitrification in the soil. There is a need to investigate the phenomenon of biological nitrification inhibition in arable crop species.

Dataset for High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation

Dataset supports:nKoebernick, N.et al (2017). High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation. New Phytologist.