Tina Treude

Rising Arctic Ocean temperatures cause gas hydrate destabilization and ocean acidification

Vast amounts of methane hydrates are potentially stored in sediments along the continental margins, owing their stability to low temperature – high pressure conditions. Global warming could destabilize these hydrates and cause a release of methane (CH 4) into the water column and possibly the atmosphere. Since the Arctic has and will be warmed considerably, Arctic bottom water temperatures and their future evolution projected by a climate model were analyzed. The resulting warming is spatially inhomogeneous, with the strongest impact on shallow regions affected by Atlantic inflow. Within the next 100 years, the warming affects 25% of shallow and mid-depth regions containing methane hydrates. Release of methane from melting hydrates in these areas could enhance ocean acidification and oxygen depletion in the water column. The impact of methane release on global warming, however, would not be significant within the considered time span.

Temporal Constraints on Hydrate-Controlled Methane Seepage off Svalbard

What Does It All Mean? Strong emissions of methane have recently been observed from shallow sediments in Arctic seas. Berndt et al. (p. 284, published online 2 January) present a record of methane seepage from marine sediments off the coast of Svalbard showing that such emissions have been present for at least 3000 years, the result of normal seasonal fluctuations of bottom waters. Thus, contemporary observations of strong methane venting do not necessarily mean that the clathrates that are the source of the methane are decomposing at a faster rate than in the past. Seasonal gas hydrate destabilization has been releasing methane from marine sediments near Svalbard for at least 3000 years. Methane hydrate is an icelike substance that is stable at high pressure and low temperature in continental margin sediments. Since the discovery of a large number of gas flares at the landward termination of the gas hydrate stability zone off Svalbard, there has been concern that warming bottom waters have started to dissociate large amounts of gas hydrate and that the resulting methane release may possibly accelerate global warming. Here, we corroborate that hydrates play a role in the observed seepage of gas, but we present evidence that seepage off Svalbard has been ongoing for at least 3000 years and that seasonal fluctuations of 1° to 2°C in the bottom-water temperature cause periodic gas hydrate formation and dissociation, which focus seepage at the observed sites.

Consumption of Methane and CO2 by Methanotrophic Microbial Mats from Gas Seeps of the Anoxic Black Sea

ABSTRACT The deep anoxic shelf of the northwestern Black Sea has numerous gas seeps, which are populated by methanotrophic microbial mats in and above the seafloor. Above the seafloor, the mats can form tall reef-like structures composed of porous carbonate and microbial biomass. Here, we investigated the spatial patterns of CH4 and CO2 assimilation in relation to the distribution of ANME groups and their associated bacteria in mat samples obtained from the surface of a large reef structure. A combination of different methods, including radiotracer incubation, beta microimaging, secondary ion mass spectrometry, and catalyzed reporter deposition fluorescence in situ hybridization, was applied to sections of mat obtained from the large reef structure to locate hot spots of methanotrophy and to identify the responsible microbial consortia. In addition, CO2 reduction to methane was investigated in the presence or absence of methane, sulfate, and hydrogen. The mat had an average δ13C carbon isotopic signature of −67.1‰, indicating that methane was the main carbon source. Regions dominated by ANME-1 had isotope signatures that were significantly heavier (−66.4‰ ± 3.9 ‰ [mean ± standard deviation; n = 7]) than those of the more central regions dominated by ANME-2 (−72.9‰ ± 2.2 ‰; n = 7). Incorporation of 14C from radiolabeled CH4 or CO2 revealed one hot spot for methanotrophy and CO2 fixation close to the surface of the mat and a low assimilation efficiency (1 to 2% of methane oxidized). Replicate incubations of the mat with 14CH4 or 14CO2 revealed that there was interconversion of CH4 and CO2. The level of CO2 reduction was about 10% of the level of anaerobic oxidation of methane. However, since considerable methane formation was observed only in the presence of methane and sulfate, the process appeared to be a rereaction of anaerobic oxidation of methane rather than net methanogenesis.

Microbial community in a sediment-hosted CO2 lake of the southern Okinawa Trough hydrothermal system.

Increasing levels of CO2 in the atmosphere are expected to cause climatic change with negative effects on the earths ecosystems and human society. Consequently, a variety of CO2 disposal options are discussed, including injection into the deep ocean. Because the dissolution of CO2 in seawater will decrease ambient pH considerably, negative consequences for deep-water ecosystems have been predicted. Hence, ecosystems associated with natural CO2 reservoirs in the deep sea, and the dynamics of gaseous, liquid, and solid CO2 in such environments, are of great interest to science and society. We report here a biogeochemical and microbiological characterization of a microbial community inhabiting deep-sea sediments overlying a natural CO2 lake at the Yonaguni Knoll IV hydrothermal field, southern Okinawa Trough. We found high abundances (>109 cm−3) of microbial cells in sediment pavements above the CO2 lake, decreasing to strikingly low cell numbers (107 cm−3) at the liquid CO2/CO2-hydrate interface. The key groups in these sediments were as follows: (i) the anaerobic methanotrophic archaea ANME-2c and the Eel-2 group of Deltaproteobacteria and (ii) sulfur-metabolizing chemolithotrophs within the Gamma- and Epsilonproteobacteria. The detection of functional genes related to one-carbon assimilation and the presence of highly 13C-depleted archaeal and bacterial lipid biomarkers suggest that microorganisms assimilating CO2 and/or CH4 dominate the liquid CO2 and CO2-hydrate-bearing sediments. Clearly, the Yonaguni Knoll is an exceptional natural laboratory for the study of consequences of CO2 disposal as well as of natural CO2 reservoirs as potential microbial habitats on early Earth and other celestial bodies.

Microbial nucleation of Mg-rich dolomite in exopolymeric substances under anoxic modern seawater salinity: New insight into an old enigma

Sulfate-reducing bacteria are known to mediate dolomite formation under hypersaline conditions, but details of the crystal nucleation process are still poorly constrained. Our laboratory study demonstrates for the first time that Desulfobulbus mediterraneus, a marine sulfate-reducing bacterium, mediates primary precipitation of Mg-rich dolomite under anoxic conditions in media replicating modern seawater chemistry at low temperature (21 °C). Precipitation of crystals was associated with extracellular polymeric substances in a monospecific biofilm, providing templates for nucleation by altering the molar Mg/Ca ratio. After initial nucleation of single nanospherulites (∼50 nm), growth was mediated by aggregation, resulting in spherulites of ∼2–3 μm in diameter. Nucleation led to differences in Mg/Ca ratios and δ44/40Ca values among the organic material (i.e., biofilm including cells and extracellular polymeric substances; 0.87 ± 0.01 [2 SD] and 0.48‰ ± 0.11‰ [2 SE], respectively), the crystals (1.02 ± 0.11 [2 SD] and <−0.08‰ ± 0.24‰ [2 SE], respectively), and the liquid bulk medium after mineral precipitation (4.53 ± 0.04 [2 SD] and 1.10‰ ± 0.24‰ [2 SE], respectively). These data indicate a two-step fractionation process involved in the sequestration of Ca from the solution into the crystal lattice of the mineral precipitated. Our results demonstrate the capability of extracellular polymeric substances to overcome kinetic inhibition, fostering the formation of kinetically less favorable Mg-rich dolomite, and they also question the applicability of the Ca isotopic system as a proxy for paleogeochemistry of seawater.

Subsurface microbial methanotrophic mats in the Black Sea.

ABSTRACT A nodule-shaped microbial mat was found subsurface in sediments of a gas seep in the anoxic Black Sea. This mat was dominated by ANME-1 archaea and consumed methane and sulfate simultaneously. We propose that such subsurface mats represent the initial stage of previously investigated microbial reefs.

Fluids from the Oceanic Crust Support Microbial Activities within the Deep Biosphere

The importance of crustal fluid chemical composition in driving the marine deep subseafloor biosphere was examined in northeast Pacific ridge-flank sediments. At IODP Site U1301, sulfate from crustal fluids diffuses into overlying sediments, forming a transition zone where sulfate meets in situ-produced methane. Enhanced cell counts and metabolic activity suggest that sulfate stimulates microbial respiration, specifically anaerobic methane oxidation coupled to sulfate reduction. Cell counts and activity are also elevated in basement-near layers. Owing to the worldwide expansion of the crustal aquifer, we postulate that crustal fluids may fuel the marine deep subseafloor biosphere on a global scale.

Ocean currents shape the microbiome of Arctic marine sediments.

Prokaryote communities were investigated on the seasonally stratified Alaska Beaufort Shelf (ABS). Water and sediment directly underlying water with origin in the Arctic, Pacific or Atlantic oceans were analyzed by pyrosequencing and length heterogeneity-PCR in conjunction with physicochemical and geographic distance data to determine what features structure ABS microbiomes. Distinct bacterial communities were evident in all water masses. Alphaproteobacteria explained similarity in Arctic surface water and Pacific derived water. Deltaproteobacteria were abundant in Atlantic origin water and drove similarity among samples. Most archaeal sequences in water were related to unclassified marine Euryarchaeota. Sediment communities influenced by Pacific and Atlantic water were distinct from each other and pelagic communities. Firmicutes and Chloroflexi were abundant in sediment, although their distribution varied in Atlantic and Pacific influenced sites. Thermoprotei dominated archaea in Pacific influenced sediments and Methanomicrobia dominated in methane-containing Atlantic influenced sediments. Length heterogeneity-PCR data from this study were analyzed with data from methane-containing sediments in other regions. Pacific influenced ABS sediments clustered with Pacific sites from New Zealand and Chilean coastal margins. Atlantic influenced ABS sediments formed another distinct cluster. Density and salinity were significant structuring features on pelagic communities. Porosity co-varied with benthic community structure across sites and methane did not. This study indicates that the origin of water overlying sediments shapes benthic communities locally and globally and that hydrography exerts greater influence on microbial community structure than the availability of methane.

Scavenger assemblages under differing trophic conditions : a case study in the deep Arabian Sea

Baited cameras and traps were deployed at four stations in the deep Arabian Sea to investigate the composition of the necrophagous fauna and to evaluate whether regional differences in trophic conditions are reflected by differing scavenger assemblages. The ophidiid fish Barathrites iris, the large lysianassoid amphipod Eurythenes gryllus, the aristeid prawn Plesiopenaeus armatus, and zoarcid fishes of the genus Pachycara were abundant at the bait at all stations. The ophidiid Holcomycteronus aequatorius, the liparid fish Paraliparis sp., and galatheid crabs of the genus Munidopsis occurred in considerable numbers at single sites. Trap catches further contained lysianassoid amphipods of the genera Paralicella, Abyssorchomene and Paracallisoma. In contrast to scavenger assemblages of the Atlantic and Pacific Ocean, macrourid fishes were virtually absent at the bait. E. gryllus and B. iris consumed the main proportion of the bait, while consumption was at most moderate in all other taxa. Feeding strategies of the respective taxa are inferred from their behavior at the bait and discussed with regard to the profit that can be drawn from food falls. Differences between stations were pronounced with respect to species dominating bait consumption. E. gryllus appeared in highest numbers at the bait in the productive northern and central Arabian Sea where a relatively high availability of food items is expected to sustain high population densities. High numbers of B. iris in the least productive southern part indicate their ability to persist under food-poor conditions and may correspond to a high dependency on food falls. E. gryllus and B. iris both occurred in smaller numbers in the particularly productive western Arabian Sea. This may reflect a reduced dependency on food falls, due to an access to alternative food sources, rather than small population densities. Smaller numbers of E. gryllus and B. iris resulted in slower bait consumption and gave Pachycara spp. the opportunity to contribute considerably to bait consumption. The relation between scavenger assemblages and trophic conditions is discussed with respect to results obtained under differing trophic regimes in the Atlantic and Pacific Ocean.

Whale-Fall Ecosystems: Recent Insights into Ecology, Paleoecology, and Evolution

Whale falls produce remarkable organic- and sulfide-rich habitat islands at the seafloor. The past decade has seen a dramatic increase in studies of modern and fossil whale remains, yielding exciting new insights into whale-fall ecosystems. Giant body sizes and especially high bone-lipid content allow great-whale carcasses to support a sequence of heterotrophic and chemosynthetic microbial assemblages in the energy-poor deep sea. Deep-sea metazoan communities at whale falls pass through a series of overlapping successional stages that vary with carcass size, water depth, and environmental conditions. These metazoan communities contain many new species and evolutionary novelties, including bone-eating worms and snails and a diversity of grazers on sulfur bacteria. Molecular and paleoecological studies suggest that whale falls have served as hot spots of adaptive radiation for a specialized fauna; they have also provided evolutionary stepping stones for vent and seep mussels and could have facilitated speciation in other vent/seep taxa.