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Dive into the research topics where Viatcheslav Berejnov is active.

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Featured researches published by Viatcheslav Berejnov.


Journal of Applied Crystallography | 2006

Effects of cryoprotectant concentration and cooling rate on vitrification of aqueous solutions

Viatcheslav Berejnov; Naji S. Husseini; Osama A. Alsaied; Robert E. Thorne

Vitrification of aqueous cryoprotectant mixtures is essential in cryopreservation of proteins and other biological samples. Systematic measurements of critical cryoprotective agent (CPA) concentrations required for vitrification during plunge-cooling from T = 295 K to T = 77 K in liquid nitrogen are reported. Measurements on fourteen common CPAs, including alcohols (glycerol, methanol, 2-propanol), sugars (sucrose, xylitol, dextrose, trehalose), polyethylene glycols (ethylene glycol, PEG 200, PEG 2000, PEG 20000), glycols [dimethyl sulfoxide (DMSO), 2-methyl-2,4-pentanediol (MPD)], and salt (NaCl), were performed for volumes ranging over four orders of magnitude from ∼1 nl to 20 µl, and covering the range of interest in protein crystallography. X-ray diffraction measurements on aqueous glycerol mixtures confirm that the polycrystalline-to-vitreous transition occurs within a span of less than 2% w/v in CPA concentration, and that the form of polycrystalline ice (hexagonal or cubic) depends on CPA concentration and cooling rate. For most of the studied cryoprotectants, the critical concentration decreases strongly with volume in the range from ∼5 µl to ∼0.1 µl, typically by a factor of two. By combining measurements of the critical concentration versus volume with cooling time versus volume, the function of greatest intrinsic physical interest is obtained: the critical CPA concentration versus cooling rate during flash-cooling. These results provide a basis for more rational design of cryoprotective protocols, and should yield insight into the physics of glass formation in aqueous mixtures.


Langmuir | 2009

Contact Line Pinning by Microfabricated Patterns: Effects of Microscale Topography

Yevgeniy Kalinin; Viatcheslav Berejnov; Robert E. Thorne

We study how the microscale topography of a solid surface affects the apparent advancing and receding angles at the contact line of a liquid drop pinned to this surface. Photolithographic methods are used to produce continuous circular polymer rings of varying cross-sectional size and shape on hydrophilic silicon wafer surfaces. Drops of water and glycerol are dispensed into the areas bounded by these rings, and critical apparent advancing and receding angles are measured and correlated with the parameters that characterize the ring cross section. For much of the examined parameter space, the apparent critical angles are independent of ring height and width and are determined primarily by the slope of the rings sidewalls, consistent with a model by Gibbs. For ring heights below a few micrometers, the critical angles decrease below the values predicted by the sidewall slopes alone. These results provide data for calculation of hysteresis on naturally rough surfaces and demonstrate a simple method for controlling and enhancing contact line pinning on solid surfaces.


Journal of Applied Crystallography | 2006

Hyperquenching for protein cryocrystallography

Matthew Warkentin; Viatcheslav Berejnov; Naji S. Husseini; Robert E. Thorne

When samples having volumes characteristic of protein crystals are plunge cooled in liquid nitrogen or propane, most cooling occurs in the cold gas layer above the liquid. By removing this cold gas layer, cooling rates for small samples and modest plunge velocities are increased to 1.5 × 10(4) K s(-1), with increases of a factor of 100 over current best practice possible with 10 μm samples. Glycerol concentrations required to eliminate water crystallization in protein-free aqueous mixtures drop from ∼28% w/v to as low as 6% w/v. These results will allow many crystals to go from crystallization tray to liquid cryogen to X-ray beam without cryoprotectants. By reducing or eliminating the need for cryoprotectants in growth solutions, they may also simplify the search for crystallization conditions and for optimal screens. The results presented here resolve many puzzles, such as why plunge cooling in liquid nitrogen or propane has, until now, not yielded significantly better diffraction quality than gas-stream cooling.


Physical Review E | 2007

Effect of transient pinning on stability of drops sitting on an inclined plane.

Viatcheslav Berejnov; Robert E. Thorne

We report on new instabilities of the quasistatic equilibrium of water drops pinned by a hydrophobic inclined substrate. The contact line of a statically pinned drop exhibits three transitions of partial depinning: depinning of the advancing and receding parts of the contact line and depinning of the entire contact line leading to the drops translational motion. We find a region of parameters where the classical Macdougall-Ockrent-Frenkel approach fails to estimate the critical volume of the statically pinned inclined drop.


Acta Crystallographica Section D-biological Crystallography | 2005

Enhancing drop stability in protein crystallization by chemical patterning

Viatcheslav Berejnov; Robert E. Thorne

The motion of protein drops on crystallization media during routine handling is a major factor affecting the reproducibility of crystallization conditions. Drop stability can be enhanced by chemical patterning to more effectively pin the drops contact line. As an example, a hydrophilic area is patterned on an initially flat hydrophobic glass slide. The drop remains confined to the hydrophilic area and the maximum drop size that remains stable when the slide is rotated to the vertical position increases. This simple method is readily scalable and has the potential to significantly improve the outcomes of hanging-drop and sitting-drop crystallization.


Journal of Colloid and Interface Science | 2008

Self-pinning protein-laden drops.

Viatcheslav Berejnov

Proteins dissolved in a drop induce and enhance the pinning of the drop contact line. This effect dramatically increases the volume of drops that are vertically pinned on a flat siliconized substrate. It was found that this drop pinning behavior exhibits two regimes: for low protein content in a drop the pinning increases as the contact angle hysteresis increases, and for high protein content the pinning decreases as the surface tension of the protein solution decreases.


Archive | 2008

System and method for increased cooling rates in rapid cooling of small biological samples

Robert E. Thorne; Matthew W. Warkentin; Viatcheslav Berejnov


Microfluidics and Nanofluidics | 2008

Controlling microdrop shape and position for biotechnology using micropatterned rings

Yevgeniy Kalinin; Viatcheslav Berejnov; Robert E. Thorne


Archive | 2006

Screening and crystallization plates for manual and high-throughput protein crystal growth

Robert E. Thorne; Viatcheslav Berejnov; Yevgeniy Kalinin


Bulletin of the American Physical Society | 2006

Contact Line Pinning by Microfabricated Patterns

Yevgeniy Kalinin; Viatcheslav Berejnov; Robert E. Thorne

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