Ya-Wei Luo

The complex effects of ocean acidification on the prominent N2-fixing cyanobacterium Trichodesmium

A future, more acidic ocean could be less productive, despite the fertilizing effects of elevated CO2. Reconciling pH and future productivity The differential effects of reduced seawater pH and increased carbon dioxide on marine phytoplankton productivity have not been resolved. Hong et al. found that previous experimentation did not account for variable metal concentrations or for ammonia contamination. After controlling for these variables, experimentation, protein expression analysis, and field data showed that low pH, coupled with the low ambient iron availability in the open ocean, inhibits nitrogen fixation, whereas elevated CO2 is fertilizing. Overall, the deleterious effects of decreased pH trump the beneficial effects of increased CO2. Thus, it seems that in a future, more acidic ocean, phytoplankton productivity is likely to be suppressed. Science, this issue p. 527 Acidification of seawater caused by anthropogenic carbon dioxide (CO2) is anticipated to influence the growth of dinitrogen (N2)–fixing phytoplankton, which contribute a large fraction of primary production in the tropical and subtropical ocean. We found that growth and N2-fixation of the ubiquitous cyanobacterium Trichodesmium decreased under acidified conditions, notwithstanding a beneficial effect of high CO2. Acidification resulted in low cytosolic pH and reduced N2-fixation rates despite elevated nitrogenase concentrations. Low cytosolic pH required increased proton pumping across the thylakoid membrane and elevated adenosine triphosphate production. These requirements were not satisfied under field or experimental iron-limiting conditions, which greatly amplified the negative effect of acidification.

Comment on"Dilution limits dissolved organic carbon utilization in the deep ocean"

Arrieta et al. (Reports, 17 April 2015, p. 331) propose that low concentrations of labile dissolved organic carbon (DOC) preclude prokaryotic consumption of a substantial fraction of DOC in the deep ocean and that this dilution acts as an alternative mechanism to recalcitrance for long-term DOC storage. Here, we show that the authors’ data do not support their claims.

Carbon pools and fluxes in the China Seas and adjacent oceans

The China Seas include the South China Sea, East China Sea, Yellow Sea, and Bohai Sea. Located off the Northwestern Pacific margin, covering 4700000 km2 from tropical to northern temperate zones, and including a variety of continental margins/basins and depths, the China Seas provide typical cases for carbon budget studies. The South China Sea being a deep basin and part of the Western Pacific Warm Pool is characterized by oceanic features; the East China Sea with a wide continental shelf, enormous terrestrial discharges and open margins to the West Pacific, is featured by strong cross-shelf materials transport; the Yellow Sea is featured by the confluence of cold and warm waters; and the Bohai Sea is a shallow semi-closed gulf with strong impacts of human activities. Three large rivers, the Yangtze River, Yellow River, and Pearl River, flow into the East China Sea, the Bohai Sea, and the South China Sea, respectively. The Kuroshio Current at the outer margin of the Chinese continental shelf is one of the two major western boundary currents of the world oceans and its strength and position directly affect the regional climate of China. These characteristics make the China Seas a typical case of marginal seas to study carbon storage and fluxes. This paper systematically analyzes the literature data on the carbon pools and fluxes of the Bohai Sea, Yellow Sea, East China Sea, and South China Sea, including different interfaces (land-sea, sea-air, sediment-water, and marginal sea-open ocean) and different ecosystems (mangroves, wetland, seagrass beds, macroalgae mariculture, coral reefs, euphotic zones, and water column). Among the four seas, the Bohai Sea and South China Sea are acting as CO2 sources, releasing about 0.22 and 13.86–33.60 Tg C yr−1 into the atmosphere, respectively, whereas the Yellow Sea and East China Sea are acting as carbon sinks, absorbing about 1.15 and 6.92–23.30 Tg C yr−1 of atmospheric CO2, respectively. Overall, if only the CO2 exchange at the sea-air interface is considered, the Chinese marginal seas appear to be a source of atmospheric CO2, with a net release of 6.01–9.33 Tg C yr−1, mainly from the inputs of rivers and adjacent oceans. The riverine dissolved inorganic carbon (DIC) input into the Bohai Sea and Yellow Sea, East China Sea, and South China Sea are 5.04, 14.60, and 40.14 Tg C yr−1, respectively. The DIC input from adjacent oceans is as high as 144.81 Tg C yr−1, significantly exceeding the carbon released from the seas to the atmosphere. In terms of output, the depositional fluxes of organic carbon in the Bohai Sea, Yellow Sea, East China Sea, and South China Sea are 2.00, 3.60, 7.40, and 5.92 Tg C yr−1, respectively. The fluxes of organic carbon from the East China Sea and South China Sea to the adjacent oceans are 15.25–36.70 and 43.93 Tg C yr−1, respectively. The annual carbon storage of mangroves, wetlands, and seagrass in Chinese coastal waters is 0.36–1.75 Tg C yr−1, with a dissolved organic carbon (DOC) output from seagrass beds of up to 0.59 Tg C yr−1. Removable organic carbon flux by Chinese macroalgae mariculture account for 0.68 Tg C yr−1 and the associated POC depositional and DOC releasing fluxes are 0.14 and 0.82 Tg C yr−1, respectively. Thus, in total, the annual output of organic carbon, which is mainly DOC, in the China Seas is 81.72–104.56 Tg C yr−1. The DOC efflux from the East China Sea to the adjacent oceans is 15.00–35.00 Tg C yr−1. The DOC efflux from the South China Sea is 31.39 Tg C yr−1. Although the marginal China Seas seem to be a source of atmospheric CO2 based on the CO2 flux at the sea-air interface, the combined effects of the riverine input in the area, oceanic input, depositional export, and microbial carbon pump (DOC conversion and output) indicate that the China Seas represent an important carbon storage area.

Contribution of structural recalcitrance to the formation of the deep oceanic dissolved organic carbon reservoir: Structural recalcitrance dominates DOM persistence

The origin of the recalcitrant dissolved organic carbon (RDOC) reservoir in the deep ocean remains enigmatic. The structural recalcitrance hypothesis suggests that RDOC is formed by molecules that are chemically resistant to bacterial degradation. The dilution hypothesis claims that RDOC is formed from a large diversity of labile molecules that escape bacterial utilization due to their low concentrations, termed as RDOCc . To evaluate the relative contributions of these two mechanisms in determining the long-term persistence of RDOC, we model the dynamics of both structurally recalcitrant DOC and RDOCc based on previously published data that describes deep oceanic DOC degradation experiments. Our results demonstrate that the majority of DOC (84.5 ± 2.2%) in the deep ocean is structurally recalcitrant. The intrinsically labile DOC (i.e., labile DOC that rapidly consumed and RDOCc ) accounts for a relatively small proportion and is consumed rapidly in the incubation experiments, in which 47.8 ± 3.2% of labile DOC and 21.9 ± 4.6% of RDOCc are consumed in 40 days. Our results suggest that the recalcitrance of RDOC is largely related to its chemical properties, whereas dilution plays a minor role in determining the persistence of deep-ocean DOC.