Yasuyuki Shima
Brandeis University
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Featured researches published by Yasuyuki Shima.
Cell | 1999
Tadao Usui; Yasuyuki Shima; Yuko Shimada; Shinji Hirano; Robert W. Burgess; T. Schwarz; Masatoshi Takeichi; Tadashi Uemura
We identified a seven-pass transmembrane receptor of the cadherin superfamily, designated Flamingo (Fmi), localized at cell-cell boundaries in the Drosophila wing. In the absence of Fmi, planar polarity was distorted. Before morphological polarization of wing cells along the proximal-distal (P-D) axis, Fmi was redistributed predominantly to proximal and distal cell edges. This biased localization of Fmi appears to be driven by an imbalance of the activity of Frizzled (Fz) across the proximal/distal cell boundary. These results, together with phenotypes caused by ectopic expression of fz and fmi, suggest that cells acquire the P-D polarity by way of the Fz-dependent boundary localization of Fmi.
Nature Neuroscience | 2007
Yasuyuki Shima; Shin-ya Kawaguchi; Kazuyoshi Kosaka; Manabu Nakayama; Mikio Hoshino; Yo-ichi Nabeshima; Tomoo Hirano; Tadashi Uemura
The growth of neurites (axon and dendrite) should be appropriately regulated by their interactions in the development of nervous systems where a myriad of neurons and their neurites are tightly packed. We show here that mammalian seven-pass transmembrane cadherins Celsr2 and Celsr3 are activated by their homophilic interactions and regulate neurite growth in an opposing manner. Both gene-silencing and coculture assay with rat neuron cultures showed that Celsr2 enhanced neurite growth, whereas Celsr3 suppressed it, and that their opposite functions were most likely the result of a difference of a single amino acid residue in the transmembrane domain. Together with calcium imaging and pharmacological analyses, our results suggest that Celsr2 and Celsr3 fulfill their functions through second messengers, and that differences in the activities of the homologs results in opposite effects in neurite growth regulation.
Genes to Cells | 2003
Yusaku Ohta; Kazuyoshi Kousaka; Kyoko Nagata-Ohashi; Kazumasa Ohashi; Aya Muramoto; Yasuyuki Shima; Ryusuke Niwa; Tadashi Uemura; Kensaku Mizuno
Background: Cofilin, a key regulator of actin filament dynamics, is inactivated by phosphorylation at Ser‐3 by LIM‐kinases and is reactivated by dephosphorylation by a family of protein phosphatases, termed Slingshot (SSH).
eLife | 2013
Cheng-Chiu Huang; Ken Sugino; Yasuyuki Shima; Caiying Guo; Suxia Bai; Brett D. Mensh; Sacha B. Nelson; Adam Hantman
Cerebellar granule cells constitute the majority of neurons in the brain and are the primary conveyors of sensory and motor-related mossy fiber information to Purkinje cells. The functional capability of the cerebellum hinges on whether individual granule cells receive mossy fiber inputs from multiple precerebellar nuclei or are instead unimodal; this distinction is unresolved. Using cell-type-specific projection mapping with synaptic resolution, we observed the convergence of separate sensory (upper body proprioceptive) and basilar pontine pathways onto individual granule cells and mapped this convergence across cerebellar cortex. These findings inform the long-standing debate about the multimodality of mammalian granule cells and substantiate their associative capacity predicted in the Marr-Albus theory of cerebellar function. We also provide evidence that the convergent basilar pontine pathways carry corollary discharges from upper body motor cortical areas. Such merging of related corollary and sensory streams is a critical component of circuit models of predictive motor control. DOI: http://dx.doi.org/10.7554/eLife.00400.001
Developmental Dynamics | 2002
Yasuyuki Shima; Neal G. Copeland; Debra J. Gilbert; Nancy A. Jenkins; Osamu Chisaka; Masatoshi Takeichi; Tadashi Uemura
Drosophila Flamingo (Fmi) is an evolutionally conserved seven‐pass transmembrane receptor of the cadherin superfamily. Fmi plays multiple roles in patterning neuronal processes and epithelial planar cell polarity. To explore the in vivo roles of Fmi homologs in mammals, we previously cloned one of the mouse homologs, mouse flamingo1/Celsr2. Here, we report the results of our study of its embryonic and postnatal expression patterns together with those of two other paralogs, Celsr1 and Celsr3. Celsr1–3 expression was initiated broadly in the nervous system at early developmental stages, and each paralog showed characteristic expression patterns in the developing CNS. These genes were also expressed in several other organs, including the cochlea, where hair cells develop planar polarity, the kidney, and the whisker. The Celsr2 protein was distributed at intercellular boundaries in the whisker and on processes of neuronal cells such as hippocampal pyramidal cells, Purkinje cells, and olfactory neurons. Celsr2 is mapped to a distal region of the mouse chromosome 3. We discussed possible functions of seven‐pass transmembrane cadherins in mouse development.
Proceedings of the National Academy of Sciences of the United States of America | 2016
Crittenden; Paul W. Tillberg; Riad Mh; Yasuyuki Shima; Gerfen Cr; Curry J; David E. Housman; Sacha B. Nelson; Edward S. Boyden; Ann M. Graybiel
Significance The dopamine-containing nigrostriatal system and its return striatonigral pathway form a loop–circuit crucial for the functions of dopamine in modulating movement and mood. Here we identify a specialized subsystem within this loop. With new mouse models and tissue expansion to allow nanoscale imaging, we demonstrate that striatonigral fibers originating in striosomes form bouquet-like arborizations innervating clusters of dopamine-containing neurons and their ventrally extending, tightly bundled dendrites. Within these formations (termed “striosome–dendron bouquets”), striosomal axons and dopamine-containing dendrites are intimately intertwined, as are other afferent and glial elements. The stunning selectivity of striosomal output to the bouquets suggests that the bouquets could exert powerful and focused control over elements of the dopamine system in normal and abnormal states. The dopamine systems of the brain powerfully influence movement and motivation. We demonstrate that striatonigral fibers originating in striosomes form highly unusual bouquet-like arborizations that target bundles of ventrally extending dopamine-containing dendrites and clusters of their parent nigral cell bodies. Retrograde tracing showed that these clustered cell bodies in turn project to the striatum as part of the classic nigrostriatal pathway. Thus, these striosome–dendron formations, here termed “striosome–dendron bouquets,” likely represent subsystems with the nigro–striato–nigral loop that are affected in human disorders including Parkinson’s disease. Within the bouquets, expansion microscopy resolved many individual striosomal fibers tightly intertwined with the dopamine-containing dendrites and also with afferents labeled by glutamatergic, GABAergic, and cholinergic markers and markers for astrocytic cells and fibers and connexin 43 puncta. We suggest that the striosome–dendron bouquets form specialized integrative units within the dopamine-containing nigral system. Given evidence that striosomes receive input from cortical regions related to the control of mood and motivation and that they link functionally to reinforcement and decision-making, the striosome–dendron bouquets could be critical to dopamine-related function in health and disease.
eLife | 2016
Yasuyuki Shima; Ken Sugino; Chris M. Hempel; Masami Shima; Praveen Taneja; James B. Bullis; Sonam Mehta; Carlos Lois; Sacha B. Nelson
There is a continuing need for driver strains to enable cell-type-specific manipulation in the nervous system. Each cell type expresses a unique set of genes, and recapitulating expression of marker genes by BAC transgenesis or knock-in has generated useful transgenic mouse lines. However, since genes are often expressed in many cell types, many of these lines have relatively broad expression patterns. We report an alternative transgenic approach capturing distal enhancers for more focused expression. We identified an enhancer trap probe often producing restricted reporter expression and developed efficient enhancer trap screening with the PiggyBac transposon. We established more than 200 lines and found many lines that label small subsets of neurons in brain substructures, including known and novel cell types. Images and other information about each line are available online (enhancertrap.bio.brandeis.edu). DOI: http://dx.doi.org/10.7554/eLife.13503.001
Genesis | 2008
Kazuyoshi Kousaka; Hiroshi Kiyonari; Naoko Oshima; Akira Nagafuchi; Yasuyuki Shima; Osamu Chisaka; Tadashi Uemura
Actin‐depolymerizing factor (ADF) and cofilin constitute a family of key regulators of actin filament dynamics. ADF/cofilin is inactivated by phosphorylation at Ser‐3 by LIM‐kinases and reactivated by dephosphorylation by Slingshot (SSH) family phosphatases. Defects in LIM kinases or ADF/cofilin have been implicated in morbidity in human or mice; however, the roles of mammalian SSH in vivo have not been addressed. In this study, we examined the endogenous expression of each mouse SSH member in various cell lines and tissues, and showed that SSH‐3L protein was strongly expressed in epithelial cells. Our structure–function analysis of SSH‐3L suggested the possibility that the C‐tail unique to SSH‐3L negatively regulates the catalytic activity of this phosphatase. Furthermore we made ssh‐3 knockout mice to examine its potential in vivo roles. Unexpectedly, ssh‐3 was not essential for viability, fertility, or development of epithelial tissues; and ssh‐3 did not genetically modify the corneal disorder of the corn1/ADF/destrin mutant. genesis 46:246–255, 2008.
Cerebral Cortex | 2015
Julian M. C. Choy; Norimitsu Suzuki; Yasuyuki Shima; Timotheus Budisantoso; Sacha B. Nelson; John M. Bekkers
Abstract Despite its comparatively simple trilaminar architecture, the primary olfactory (piriform) cortex of mammals is capable of performing sophisticated sensory processing, an ability that is thought to depend critically on its extensive associational (intracortical) excitatory circuits. Here, we used a novel transgenic mouse model and optogenetics to measure the connectivity of associational circuits that originate in semilunar (SL) cells in layer 2a of the anterior piriform cortex (aPC). We generated a mouse line (48L) in which channelrhodopsin‐2 (ChR) could be selectively expressed in a subset of SL cells. Light‐evoked excitatory postsynaptic currents (EPSCs) could be evoked in superficial pyramidal cells (17.4% of n = 86 neurons) and deep pyramidal cells (33.3%, n = 9) in the aPC, but never in ChR− SL cells (0%, n = 34). Thus, SL cells monosynaptically excite pyramidal cells, but not other SL cells. Light‐evoked EPSCs were also selectively elicited in 3 classes of GABAergic interneurons in layer 3 of the aPC. Our results show that SL cells are specialized for providing feedforward excitation of specific classes of neurons in the aPC, confirming that SL cells comprise a functionally distinctive input layer.
Journal of Neurophysiology | 2017
Sean M. O’Toole; Monica M. Ferrer; Jennifer Mekonnen; Haihan Zhang; Yasuyuki Shima; David R. Ladle; Sacha B. Nelson
Neuronal cell identity is established during development and must be maintained throughout an animals life (Fishell G, Heintz N. Neuron 80: 602-612, 2013). Transcription factors critical for establishing neuronal identity can be required for maintaining it (Deneris ES, Hobert O. Nat Neurosci 17: 899-907, 2014). Posttranscriptional regulation also plays an important role in neuronal differentiation (Bian S, Sun T. Mol Neurobiol 44: 359-373, 2011), but its role in maintaining cell identity is less established. To better understand how posttranscriptional regulation might contribute to cell identity, we examined the proprioceptive neurons in the dorsal root ganglion (DRG), a highly specialized sensory neuron class, with well-established properties that distinguish them from other neurons in the ganglion. By conditionally ablating Dicer in mice, using parvalbumin (Pvalb)-driven Cre recombinase, we impaired posttranscriptional regulation in the proprioceptive sensory neuron population. Knockout (KO) animals display a progressive form of ataxia at the beginning of the fourth postnatal week that is accompanied by a cell death within the DRG. Before cell loss, expression profiling shows a reduction of proprioceptor specific genes and an increased expression of nonproprioceptive genes normally enriched in other ganglion neurons. Furthermore, although central connections of these neurons are intact, the peripheral connections to the muscle are functionally impaired. Posttranscriptional regulation is therefore necessary to retain the transcriptional identity and support functional specialization of the proprioceptive sensory neurons.NEW & NOTEWORTHY We have demonstrated that selectively impairing Dicer in parvalbumin-positive neurons, which include the proprioceptors, triggers behavioral changes, a lack of muscle connectivity, and a loss of transcriptional identity as observed through RNA sequencing. These results suggest that Dicer and, most likely by extension, microRNAs are crucially important for maintaining proprioception. Additionally, this study hints at the larger question of how neurons maintain their functional and molecular specificity.