Yoshiyuki Sakuraba
St. Jude Children's Research Hospital
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Featured researches published by Yoshiyuki Sakuraba.
Neuron | 2007
Steven J. Clapcote; Tatiana V. Lipina; J. Kirsty Millar; Shaun Mackie; Sheila Christie; Fumiaki Ogawa; Jason P. Lerch; Keith Trimble; Masashi Uchiyama; Yoshiyuki Sakuraba; Hideki Kaneda; Toshihiko Shiroishi; Miles D. Houslay; R. Mark Henkelman; John G. Sled; Yoichi Gondo; David J. Porteous; John C. Roder
To support the role of DISC1 in human psychiatric disorders, we identified and analyzed two independently derived ENU-induced mutations in Exon 2 of mouse Disc1. Mice with mutation Q31L showed depressive-like behavior with deficits in the forced swim test and other measures that were reversed by the antidepressant bupropion, but not by rolipram, a phosphodiesterase-4 (PDE4) inhibitor. In contrast, L100P mutant mice exhibited schizophrenic-like behavior, with profound deficits in prepulse inhibition and latent inhibition that were reversed by antipsychotic treatment. Both mutant DISC1 proteins exhibited reduced binding to the known DISC1 binding partner PDE4B. Q31L mutants had lower PDE4B activity, consistent with their resistance to rolipram, suggesting decreased PDE4 activity as a contributory factor in depression. This study demonstrates that Disc1 missense mutations in mice give rise to phenotypes related to depression and schizophrenia, thus supporting the role of DISC1 in major mental illness.
BMC Molecular Biology | 2007
K. Ryo Takahasi; Yoshiyuki Sakuraba; Yoichi Gondo
BackgroundWith the advent of sequence-based approaches in the mutagenesis studies, it is now possible to directly evaluate the genome-wide pattern of experimentally induced DNA sequence changes for a diverse array of organisms. To gain a more comprehensive understanding of the mutational bias inherent in mouse ENU mutagenesis, this study describes a detailed evaluation of the induced mutational pattern obtained from a sequence-based screen of ENU-mutagenized mice.ResultsBased on a large-scale screening data, we derive the sequence-based estimates of the nucleotide-specific pattern and frequency of ENU-induced base replacement mutation in the mouse germline, which are then combined with the pattern of codon usage in the mouse coding sequences to infer the spectrum of amino acid changes obtained by ENU mutagenesis. We detect a statistically significant difference between the mutational patterns in phenotype- versus sequence-based screens, which presumably reflects differential phenotypic effects caused by different amino acid replacements. We also demonstrate that the mutations exhibit strong strand asymmetry, and that this imbalance is generated by transcription, most likely as a by-product of transcription-coupled DNA repair in the germline.ConclusionThe results clearly illustrate the biased nature of ENU-induced mutations. We expect that a precise understanding of the mutational pattern and frequency of induced nucleotide changes would be of practical importance when designing sequence-based screening strategies to generate mutant mouse strains harboring amino acid variants at specific loci. More generally, by enhancing the collection of experimentally induced mutations in unambiguously defined genomic regions, sequence-based mutagenesis studies will further illuminate the molecular basis of mutagenic and repair mechanisms that preferentially produce a certain class of mutational changes over others.
Journal of Biological Chemistry | 2015
Norihito Shibata; Nobumichi Ohoka; Yusuke Sugaki; Chiaki Onodera; Mizuho Inoue; Yoshiyuki Sakuraba; Daisuke Takakura; Noritaka Hashii; Nana Kawasaki; Yoichi Gondo; Mikihiko Naito
Background: 20 read-through mutations that produce C-terminally extended proteins are related to human hereditary disorders. Results: The C-terminal extended proteins of mouse cFLIP-L (cellular FLICE-like apoptosisinhibitory protein) and human PNPO (pyridoxamine 5-phosphate oxidase) and HSD3B2 (3-hydroxysteroid dehydrogenase type II) are ubiquitylated and degraded, involving an E3 ligase, TRIM21, for cFLIP-L and PNPO degradation. Conclusion: Read-through mutant cFLIP-L, PNPO, and HSD3B2 are degraded by the ubiquitin-proteasome system. Significance: Degradation of read-through mutant proteins may cause hereditary disorders. During translation, stop codon read-through occasionally happens when the stop codon is misread, skipped, or mutated, resulting in the production of aberrant proteins with C-terminal extension. These extended proteins are potentially deleterious, but their regulation is poorly understood. Here we show in vitro and in vivo evidence that mouse cFLIP-L with a 46-amino acid extension encoded by a read-through mutant gene is rapidly degraded by the ubiquitin-proteasome system, causing hepatocyte apoptosis during embryogenesis. The extended peptide interacts with an E3 ubiquitin ligase, TRIM21, to induce ubiquitylation of the mutant protein. In humans, 20 read-through mutations are related to hereditary disorders, and extended peptides found in human PNPO and HSD3B2 similarly destabilize these proteins, involving TRIM21 for PNPO degradation. Our findings indicate that degradation of aberrant proteins with C-terminal extension encoded by read-through mutant genes is a mechanism for loss of function resulting in hereditary disorders.
Mechanisms of Development | 2013
Yoshinori Katsuragi; Junko Anraku; Mitsushiro Nakatomi; Hiroko Ida-Yonemochi; Miki Obata; Yukio Mishima; Yoshiyuki Sakuraba; Yoichi Gondo; Yasumitsu Kodama; Atsushi Nishikawa; Ritsuo Takagi; Hayato Ohshima; Ryo Kominami
Rodent incisors maintain the ability to grow continuously and their labial dentin is covered with enamel. Bcl11b zinc-finger transcription factor is expressed in ameloblast progenitors in mouse incisors and its absence in Bcl11b(KO/KO) mice results in a defect in embryonic tooth development. However, the role of Bcl11b in incisor maintenance in adult tissue was not studied because of death at birth in Bcl11b(KO/KO) mice. Here, we examined compound heterozygous Bcl11b(S826G/KO) mice, one allele of which has an amino acid substitution of serine at position 826 for glycine, that exhibited hypoplastic maxillary incisors with lower concentrations of minerals at the enamel and the dentin, accompanying the maxillary bone hypoplasia. Histological examinations revealed hypoplasia of the labial cervical loop in incisors, shortening of the ameloblast progenitor region, and impairment in differentiation and proliferation of ameloblast-lineage cells. Interestingly, however, juvenile mice at 5days after birth did not show marked change in these phenotypes. These results suggest that attenuated Bcl11b activity impairs ameloblast progenitors and incisor maintenance. The number of BrdU label-retaining cells, putative stem cells, was lower in Bcl11b(S826G/KO) incisors, which suggests the incisor hypoplasia may be in part a result of the decreased number of stem cells. Interestingly, the level of Shh and FGF3 expressions, which are assumed to play key roles in the development and maintenance of ameloblasts and odontoblasts, was not decreased, though the expressed areas were more restricted in ameloblast progenitor and mesenchyme regions of Bcl11b(S826G/KO) incisors, respectively. Those data suggest that the incisor maintenance by Bcl11b is not directly related to the FGF epithelial-mesenchymal signaling loop including Shh but is intrinsic to ameloblast progenitors and possibly stem cells.
Carcinogenesis | 2015
Akira Sakamaki; Yoshinori Katsuragi; Kensuke Otsuka; Masanori Tomita; Miki Obata; Tomohiro Iwasaki; Manabu Abe; Toshihiro Sato; Masako Ochiai; Yoshiyuki Sakuraba; Yutaka Aoyagi; Yoichi Gondo; Kenji Sakimura; Hitoshi Nakagama; Yukio Mishima; Ryo Kominami
SWI/SNF chromatin remodeling complexes constitute a highly related family of multi-subunit complexes to modulate transcription, and SWI/SNF subunit genes are collectively mutated in 20% of all human cancers. Bcl11b is a SWI/SNF subunit and acts as a haploinsufficient tumor suppressor in leukemia/lymphomas. Here, we show expression of Bcl11b in intestinal crypt cells and promotion of intestinal tumorigenesis by Bcl11b attenuation in Apc (min/+) mice. Of importance, mutations or allelic loss of BCL11B was detected in one-third of human colon cancers. We also show that attenuated Bcl11b activity in the crypt base columnar (CBC) cells expressing the Lgr5 stem cell marker enhanced regeneration of intestinal epithelial cells after the radiation-induced injury. Interestingly, BCL11B introduction in human cell lines downregulated transcription of β-catenin target genes, whereas Bcl11b attenuation in Lgr5(+) CBCs increased expression of β-catenin targets including c-Myc and cyclin D1. Together, our results argue that Bcl11b impairment promotes tumor development in mouse and human intestine at least in part through deregulation of β-catenin pathway.
International Immunology | 2015
Satoshi Hirose; Maki Touma; Rieka Go; Yoshinori Katsuragi; Yoshiyuki Sakuraba; Yoichi Gondo; Manabu Abe; Kenji Sakimura; Yukio Mishima; Ryo Kominami
If Bcl11b activity is compromised, CD4(+)CD8(+) double-positive (DP) thymocytes produce a greatly increased fraction of innate CD8(+) single-positive (SP) cells highly producing IFN-γ, which are also increased in mice deficient of genes such as Itk, Id3 and NF-κB1 that affect TCR signaling. Of interest, the increase in the former two is due to the bystander effect of IL-4 that is secreted by promyelocytic leukemia zinc finger-expressing NKT and γδT cells whereas the increase in the latter is cell intrinsic. Bcl11b zinc-finger proteins play key roles in T cell development and T cell-mediated immune response likely through TCR signaling. We examined thymocytes at and after the DP stage in Bcl11b (F/S826G) CD4cre, Bcl11b (F/+) CD4cre and Bcl11b (+/S826G) mice, carrying the allele that substituted serine for glycine at the position of 826. Here we show that Bcl11b impairment leads to an increase in the population of TCRαβ(high)CD44(high)CD122(high) innate CD8SP thymocytes, together with two different developmental abnormalities: impaired positive and negative selection accompanying a reduction in the number of CD8SP cells, and developmental arrest of NKT cells at multiple steps. The innate CD8SP thymocytes express Eomes and secrete IFN-γ after stimulation with PMA and ionomycin, and in this case their increase is not due to a bystander effect of IL-4 but cell intrinsic. Those results indicate that Bcl11b regulates development of different thymocyte subsets at multiple stages and prevents an excess of innate CD8SP thymocytes.
Biochemical and Biophysical Research Communications | 2016
Hideaki Toki; Osamu Minowa; Maki Inoue; Hiromi Motegi; Yuko Karashima; Ami Ikeda; Hideki Kaneda; Yoshiyuki Sakuraba; Yuriko Saiki; Shigeharu Wakana; Hiroshi Suzuki; Yoichi Gondo; Toshihiko Shiroishi; Tetsuo Noda
Dominant mutations in the Serca2 gene, which encodes sarco(endo)plasmic reticulum calcium-ATPase, predispose mice to gastrointestinal epithelial carcinoma [1-4] and humans to Darier disease (DD) [14-17]. In this study, we generated mice harboring N-ethyl-N-nitrosourea (ENU)-induced allelic mutations in Serca2: three missense mutations and one nonsense mutation. Mice harboring these Serca2 mutations developed tumors that were categorized as either early onset squamous cell tumors (SCT), with development similar to null-type knockout mice [2,4] (aggressive form; M682, M814), or late onset tumors (mild form; M1049, M1162). Molecular analysis showed no aberration in Serca2 mRNA or protein expression levels in normal esophageal cells of any of the four mutant heterozygotes. There was no loss of heterozygosity at the Serca2 locus in the squamous cell carcinomas in any of the four lines. The effect of each mutation on Ca(2+)-ATPase activity was predicted using atomic-structure models and accumulated mutated protein studies, suggesting that putative complete loss of Serca2 enzymatic activity may lead to early tumor onset, whereas mutations in which Serca2 retains residual enzymatic activity result in late onset. We propose that impaired Serca2 gene product activity has a long-term effect on squamous cell carcinogenesis from onset to the final carcinoma stage through an as-yet unrecognized but common regulatory pathway.
Cancer Research | 2009
Yoshiyuki Sakuraba; Satoshi Ohta; Katsumi Kitagawa
Sgt1 is an Hsp90 co‐chaperone that is highly conserved among species, from yeast to humans. In vitro studies using siRNA and small‐molecule inhibitors have indicated that Sgt1 is required for kinetochore assembly, proper localization of the spindle checkpoint proteins during mitosis, and genomic stability in humans. In vivo studies using knockout (KO) mice have revealed that kinetochore and spindle checkpoint genes are related to tumorigenesis. To examine the in vivo functions of Sgt1 gene in mammals, especially in tumorigenesis, we generated and analyzed Sgt1 KO mice by using a gene‐trap line. No Sgt1 homozygous KO mice were obtained from heterozygous intercrosses, even in E8.5 embryos, suggesting that Sgt1 homozygous mice are early embryonic lethal. In contrast, Sgt1 heterozygous mutants grew normally and did not exhibit any obvious phenotypes. We are now monitoring carcinogen‐induced and spontaneous tumorigenesis in Sgt1 heterozygous mutants. We generated Sgt1 p53 double mutants in order to enhance the phenotypes associated with tumorigenesis. p53 is a major tumor suppressor gene, and p53 −/− KO mice usually die when they are approximately 20 weeks old, mainly because of lymphoma. Interestingly, Sgt1 +/− p53 −/− double mutants, especially females, survive significantly longer than p53 −/− single mutants, suggesting that the Sgt1 heterozygous mutation suppresses p53 −/− ‐induced tumorigenesis. In addition to the survival phenotype, the unequal gender ratio (more males than females) in p53 −/− mutants was also overcome by the Sgt1 heterozygous mutation. These results suggest that the Sgt1 heterozygous mutation suppresses the p53 KO phenotypes not only in tumorigenesis but also in embryonic development defects of females. We are currently examining whether the female infertility in p53 −/− is also suppressed by the Sgt1 mutation. We will discuss how Sgt1 suppresses the p53 phenotypes at the meeting. Citation Information: Cancer Res 2009;69(23 Suppl):A78.
Human Molecular Genetics | 2005
Hiroshi Masuya; Kunihiko Shimizu; Hideki Sezutsu; Yoshiyuki Sakuraba; Junko Nagano; Aya Shimizu; Naomi Fujimoto; Akiko Kawai; Ikuo Miura; Hideki Kaneda; Kimio Kobayashi; Junko Ishijima; Takahide Maeda; Yoichi Gondo; Tetsuo Noda; Shigeharu Wakana; Toshihiko Shiroishi
Biochemical and Biophysical Research Communications | 2005
Yoshiyuki Sakuraba; Hideki Sezutsu; K. Ryo Takahasi; Keiko Tsuchihashi; Rie Ichikawa; Naomi Fujimoto; Satoko Kaneko; Yuji Nakai; Masashi Uchiyama; Noriko Goda; Rika Motoi; Ami Ikeda; Yuko Karashima; Maki Inoue; Hideki Kaneda; Hiroshi Masuya; Osamu Minowa; Hideki Noguchi; Atsushi Toyoda; Yoshiyuki Sakaki; Shigeharu Wakana; Tetsuo Noda; Toshihiko Shiroishi; Yoichi Gondo