Yuri Mazei

Morphological studies on five trachelocercids from the Yellow Sea coast of China, with a description of Tracheloraphis huangi spec. nov. (Ciliophora, Karyorelictea)

The morphology and infraciliature of five trachelocercid ciliates: Tracheloraphis huang i spec. nov., T. colubis (Kahl, 1933) comb. nov., T. phoenicopterus (Cohn, 1866) Dragesco, 1960, T. oligostriata (Raikov, 1962) Foissner and Dragesco, 1996 and Trachelocerca incaudata Kahl, 1933, isolated from the intertidal zone of a beach at Qingdao, China, were studied in live and protargol impregnated specimens. Tracheloraphis huangi spec. nov. was distinguished from its congeners mainly by its single nuclear group composed of 25–30 round macronuclei and 29–37 somatic kineties. The poorly known T. colubis is redescribed including for the first time information on its infraciliature. An improved diagnosis is also provided. In light of its infraciliature, T. colubis is transferred to Tracheloraphis from the genus Trachelocerca . Additional data on other three species is supplied based on the Qingdao populations.

Heterotrophic Flagellates from Freshwater and Soil Habitats in Subtropical China (Wuhan Area, Hubei Province)

We studied the diversity of heterotrophic flagellates from the sandy sediments of the Yangtze River, sandy and silty sediments of Donghu Lake, soil, moss and litter from the Luojiashan and Moshan hills as well as litter from the floodplain near Donghu Lake in April 2010. Sixty-seven heterotrophic flagellate species were identified by means of phase and interference contrast light microscopy and transmission electron microscopy. The majority of the observed flagellates were bacterivorous. Local species richness of river sediment communities was significantly lower than that of lake sediments and terrestrial habitats. The communities from the terrestrial habitats were more heterogeneous than those from freshwater sediments. Common species for the aquatic habitats were Rhynchomonas nasuta, Paraphysomonas sp., Neobodo designis, N. curvifilis, Bodo saltans and Spumella spp. In the soils only Spumella spp. was found in the majority of samples. Most characteristic taxa for the lake sediments were Helkesimastix faecicola, Petalomonas minuta, P. pusilla, Diphylleia rotans, Amastigomonas caudata. Amoeboflagellates such as Cercomonas angustus, C. granulifera, Paracercomonas crassicauda were specific for the terrestrial habitats. There were no specific taxa in the river sediments. The majority of the heterotrophic flagellates identified in this survey have been noted in China earlier. They are common (and usually predominant) for other regions in both freshwater and soil habitats.

An Estimation of the Global Diversity and Distribution of the Smallest Eukaryotes: Biogeography of Marine Benthic Heterotrophic Flagellates

Protists are ubiquitous, but the factors influencing their diversity and biogeography remain unclear. We use a comprehensive database on the marine benthic heterotrophic flagellate (HF) morphospecies to explore the worldwide patterns in their diversity and distribution in comparison with predictions of the Ubiquity model (UM) and Moderate Endemicity model (MEM). The number of known HF morphospecies was limited (even when considering the rates of descriptions), and the local-to-global diversity ratio was relatively high (10-25%). Regional diversity was highly correlated with the investigative effort, indicating considerable under-exploration. Regional endemics were few (not over 19% of total richness), and many morphospecies were widespread or even cosmopolitan. No obvious latitudinal trend in HF diversity was detected. By species composition, the regions were distinctly arranged into three groups according to cold, temperate and warm waters, but not in accordance with geographical distances. This distribution pattern was most likely explained by contemporary climate (temperature) but did not suggest clear geographical barriers for dispersal. Therefore, the HF are less concordant with the MEM predictions but closer to the UM than other (larger) protists. Molecular studies reveal significantly higher HF diversity; the distributional patterns obtained from genetic- and morphology-based data, however, complement but not generally contradict each other.

Ecological and environmental transition across the forested-to-open bog ecotone in a west Siberian peatland

Climate change may cause increasing tree cover in boreal peatlands, and the impacts of this encroachment will be noted first at forested-to-open bog ecotones. We investigate key metrics of ecosystem function in five such ecotones at a peatland complex in Western Siberia. Stratigraphic analysis of three cores from one of these transects shows that the ecotone has been dynamic over time with evidence for recent expansion of forested peatland. We observed that the two alternative states for northern boreal peatlands (forested/open) clearly support distinct plant and microbial communities. These in turn drive and respond to a number of feedback mechanisms. This has led to steep ecological gradients across the ecotones. Tree cover was associated with lower water tables and pH, along with higher bulk density, aquatic carbon concentrations, and electrical conductivity. We propose that the conditions found in the forested peatland of Western Siberia make the carbon sink more vulnerable to warmer and drier conditions.

Diversity and Distribution of Free-living Ciliates from High-Arctic Kara Sea Sediments

For the first time, free-living ciliates were studied in sediments from a variety of habitats in the Kara Sea (the Arctic Ocean). Ciliates were found in a wide range of environmental conditions (from the intertidal zone up to depths of 554m, from salinities ranging from 0 to 34psu, and from coarse sands and gravel to muddy sediments), with total abundances varying from 1 to 127ind/cm3. Altogether, 114 species were identified, most of which were widely distributed and were previously reported from other Arctic regions. An unsaturated species accumulation curve and the presence of many rare species indicated that the Kara Sea is potentially as rich in ciliates as other regions. Fine- and medium-grained sands exhibited the richest and most abundant ciliate fauna, with many interstitial forms occurring up to depths of 200m; whereas both the coarse sands of the exposed intertidal beaches and the sublittoral muds were poorly inhabited by non-specific euryoecious species. The granulometric composition of sediments was suggested to be the main driver controlling the diversity and composition of ciliate communities, while the other factors, such as salinity, water productivity and depth, were of secondary importance.

Long‐term population dynamics: Theory and reality in a peatland ecosystem

Summary Population dynamics is a field rich in theory and poor in long-term observational data. Finding sources of long-term data is critical as ecosystems around the globe continue to change in ways that current theories and models have failed to predict. Here we show how long-term ecological data can improve our understanding about palaeo-population change in response to external environmental factors, antecedent conditions and community diversity. We examined a radiometrically-dated sediment core from the Didachara Mire in the mountains of south-western Georgia (Caucasus) and analysed multiple biological proxies (pollen, fern spores, non-pollen palynomorphs, charcoal, diatoms, chrysophyte cysts, midges, mites and testate amoebae). Numerical techniques, including multivariate ordination, rarefaction, independent splitting and trait analysis, were used to assess the major drivers of changes in community diversity and population stability. Integrated multi-proxy analyses are very rare in the Caucasus, making this a unique record of long-term ecological change in a global biodiversity hotspot. Synthesis. Population changes in the terrestrial community coincided primarily with external environmental changes, while populations within the peatland community were affected by both internal and external drivers at different times. In general, our observations accord with theoretical predictions that population increases lead to greater stability and declines lead to instability. Random variation and interspecific competition explain population dynamics that diverged from predictions. Population change and diversity trends were positively correlated in all taxonomic groups, suggesting that population-level instability is greater in more diverse communities, even though diverse communities are themselves more stable. There is a continuing need to confront population theory with long-term data to test the predictive success of theoretical frameworks, thereby improving their ability to predict future change. This article is protected by copyright. All rights reserved.

Testate amoeba transfer function performance along localised hydrological gradients

Testate amoeba transfer functions are widely used for reconstruction of palaeo-hydrological regime in peatlands. However, the limitations of this approach have become apparent with increasing attention to validation and assessing sources of uncertainty. This paper investigates effects of peatland type and sampling depth on the performance of a transfer function using an independent test-set from four Sphagnum-dominated sites in European Russia (Penza Region). We focus on transfer function performance along localised hydrological gradients, which is a useful analogue for predictive ability through time. The performance of the transfer function with the independent test-set was generally weaker than for the leave-one-out or bootstrap cross-validations. However, the transfer function was robust for the reconstruction of relative changes in water-table depth, provided the presence of good modern analogues and overlap in water-table depth ranges. When applied to subsurface samples, the performance of the transfer function was reduced due to selective decomposition, the presence of deep-dwelling taxa or vertical transfer of shells. Our results stress the importance of thorough testing of transfer functions, and highlight the role of taphonomic processes in determining results. Further studies of stratification, taxonomy and taphonomy of testate amoebae will be needed to improve the robustness of transfer function output.

Autogenic and allogenic factors affecting development of a floating Sphagnum-dominated peat mat in a karst pond basin

Lateral expansion of floating vegetation mats over the surface of aquatic ecosystems (terrestrialization) is one of the ways of peatland development. This process was commonly studied in kettle-hole lakes, whereas karst ponds have received less attention. We used a suite of palaeoecological analyses at Karstovoe mire (Mordovia, Russia) to reconstruct the formation of a floating Sphagnum-dominated peat mat over the karst pond. The results show that the floating peat mat had covered the central part of the pond by ca. AD 1600. Remains of Scirpus sp. and Calamagrostis sp. in the basal layers indicate that these plants might form a framework on which Sphagnum mosses and sedges were established. The terrestrialization could be triggered by the ‘Medieval Warm Period’ (AD 950–1250) as droughts reduce water levels and allow the pioneering plants to colonize exposed bottom sediments on the margins of lakes. Later, the development of the mire was mainly driven by autogenic factors that could be explained by the relatively stable hydrological regime in freely floating or poorly attached vegetation mats. In the mid 19th century, the surface wetness of the mire started to decline that can be related to both increased human activity associated with fires and to a greater thickness of the mat so that autogenic and allogenic effects were difficult to disentangle. In less than a century after that, the fen transformed to a pioneer raised mire. Our results show complex and context-dependent effect of autogenic and allogenic factors on the development of floating peat mats.

First records of testate amoebae from the Novaya Zemlya archipelago (Russian Arctic)

Testate amoebae have proved a useful group of species to understand the biogeography of larger microorganisms. The Arctic has attracted particular interest in such studies but there are large geographic gaps in current knowledge. Here we present what we believe is the first ever study of testate amoebae from the Novaya Zemlya archipelago in Arctic Russia. We investigated testate amoebae from the northernmost island of Novaya Zemlya proper and two smaller islands to the south: Dolgii Island and Matveev Island. We found that testate amoebae were present and active even in the extreme physical environment of northern Novaya Zemlya. Further south in the tundra zone of Dolgii and Matveev islands, testate amoebae were notably abundant and diverse. There were distinct differences in assemblage between all three islands and particularly between Novaya Zemlya and the two more southerly islands. The assemblage of Novaya Zemlya was distinctive with a surprising abundance of larger taxa. Comparisons to previous data suggest that the testate amoeba assemblages of these islands may show more affinity to those further west in Greenland and Svalbard than those further east in Siberia. Results highlight the limited knowledge of the abundance and diversity of these functionally significant protists in large areas of the globe.

Morphology and phylogeny of the testate amoebae Euglypha bryophila Brown, 1911 and Euglypha cristata Leidy, 1874 (Rhizaria, Euglyphida)

The genus Euglypha contains the largest number of filose testate amoeba taxa which were mainly described based on the morphological characteristics of shells. Despite the increasing amount of molecular data, the phylogenetic relationships within the genus Euglypha remain unresolved. In this work we provide new data on SSU rRNA gene sequences, light and electron microscopy for the two euglyphid species Euglypha bryophilaBrown, 1911 and Euglypha cristataLeidy, 1874. Both species are characterised by the presence of a turf of spines on the aboral pole of the shells but differ in shell cross sections (elliptical and circular, respectively). A newly revealed feature of E. bryophila is a three-lobed thickening at the anterior margin and an elongated lobe at the posterior margin of apertural plates. The phylogenetic analysis shows that the species group together with the previously sequenced taxa of the genus Euglypha according to the shell cross-section. The subdivision of the genus based on the shell symmetry may reflect evolutionary trends to complication of the shell from radial to biradial symmetry. We also suggest that the shape of the anterior thickening of apertural plates and the lobe at the posterior margin can be used to distinguish Euglypha at the species level.