Yurong Yang
QIMR Berghofer Medical Research Institute
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BMJ | 2012
Donald P. McManus; Darren J. Gray; Wenbao Zhang; Yurong Yang
#### Summary points Echinococcosis (hydatid disease) is caused by the larvae of dog and fox tapeworms (cestodes) of the genus Echinococcus (family Taeniidae).1 2 3 This zoonosis is characterised by long term growth of metacestode (hydatid) cysts in humans and mammalian intermediate hosts. The two major species that infect humans are E granulosus and E multilocularis , which cause cystic echinococcosis (CE) and alveolar echinococcosis (AE). A few reported cases of polycystic echinococcosis in Central and South America are caused by E vogeli and E oligarthrus .2 w1 w2 The clinical potential of two other Echinococcus species ( E shiquicus and E felidis ) is unknown.1 2 #### Sources and selection criteria We obtained information from personal reference archives, personal experience, and extensive literature searches of the PubMed and Cochrane databases. We sourced English language papers that were fully published mainly between 2000 and March 2012 using appropriate index terms. …
Parasitology | 2013
Patrick Giraudoux; Francis Raoul; Eve Afonso; Iskender Ziadinov; Yurong Yang; Li Li; Tiaoying Li; Jean Pierre Quéré; Xiaohui Feng; Qian Wang; Hao Wen; Akira Ito; Philip S. Craig
SUMMARY From continental to regional scales, the zoonosis alveolar echinococcosis (AE) (caused by Echinococcus multilocularis) forms discrete patches of endemicity within which transmission hotspots of much larger prevalence may occur. Since the late 80s, a number of hotspots have been identified in continental Asia, mostly in China, wherein the ecology of intermediate host communities has been described. This is the case in south Gansu, at the eastern border of the Tibetan plateau, in south Ningxia, in the western Tian Shan of Xinjiang, and in the Alay valley of south Kyrgyzstan. Here we present a comparative natural history and characteristics of transmission ecosystems or ecoscapes. On this basis, regional types of transmission and their ecological characteristics have been proposed in a general framework. Combining climatic, land cover and intermediate host species distribution data, we identified and mapped 4 spatially distinct types of transmission ecosystems typified by the presence of one of the following small mammal ‘flagship’ species: Ellobius tancrei, Ochotona curzoniae, Lasiopodomys brandtii or Eospalax fontanierii. Each transmission ecosystem had its own characteristics which can serve as a reference for further in-depth research in the transmission ecology of E. multilocularis. This approach may be used at fine spatial scales to characterize other poorly known transmission systems of the large Eurasian endemic zone, and help in consideration of surveillance systems and interventions.
PLOS ONE | 2014
Xingwei Ni; Donald P. McManus; Zhongzi Lou; Jifei Yang; Hongbin Yan; Li Li; Hongmin Li; Quanyuan Liu; Chunhua Li; Wan-Gui Shi; Yan-Lei Fan; Xu Liu; Jin-Zhong Cai; Meng-Tong Lei; Baoquan Fu; Yurong Yang; Wanzhong Jia
Background Cystic echinococcosis is highly prevalent in northwest China. A cost-effective, easy to operate diagnostic tool with high sensitivity and specificity would greatly facilitate the monitoring of Echinococcus infections in canine definitive hosts. Methods The primers used in the LAMP assay were based on the mitochondrial nad5 gene of E. granulosus sensu stricto (E. granulosus s.s., or E.g.s.s.) and were designed using Primer Explorer V4 software. The developed LAMP assay was compared with a conventional PCR method, copro-ELISA and microscopy, using the faeces of dogs experimentally infected with E.g.s.s., and field-collected faeces of domestic dogs including 190 from Qinghai province highly endemic for E.g.s.s. and 30 controls from an area in Gansu, where a domestic dog de-worming program was in operation. Results The positivity rates obtained for the field-collected faecal samples were 12.6%, 1.6% and 2.1% by the LAMP, PCR and copro-ELISA assays, respectively. All samples obtained from the control dogs were negative. Compared with the conventional PCR, the LAMP assay provided 88.8% specificity and 100% sensitivity. The higher sensitivity of the LAMP method was also shown by the fact that it could detect the presence of laboratory challenge dog infections of E. granulsous s.s. four days earlier than the PCR method. Three copro-samples shown positive by the commercial copro-ELISA were all negative by LAMP, PCR and microscopy, which suggests these samples may have originated from another infection rather than E. granulsous s.s., possibly E. shiquicus or E. Canadensis, which is also present in China. Conclusions We have developed a potentially useful surveillance tool for determining the prevalence of canine E. granulosus s.s. infections in the field. The LAMP assay may lead to a more cost-effective and practicable way of tracking Echinococcus infections in canids, especially when combined with the copro-ELISA.
PLOS Neglected Tropical Diseases | 2015
Cong-Nuan Liu; Zhongzi Lou; Li Li; Hongbin Yan; David Blair; Meng-Tong Lei; Jin-Zhong Cai; Yan-Lei Fan; Jian-Qiu Li; Baoquan Fu; Yurong Yang; Donald P. McManus; Wan-Zhong Jia
Background Infections of Echinococcus granulosus sensu stricto (s.s), E. multilocularis and E. shiquicus are commonly found co-endemic on the Qinghai-Tibet plateau, China, and an efficient tool is needed to facilitate the detection of infected hosts and for species identification. Methodology/Principal Findings A single-tube multiplex PCR assay was established to differentiate the Echinococcus species responsible for infections in intermediate and definitive hosts. Primers specific for E. granulosus, E. multilocularis and E. shiquicus were designed based on sequences of the mitochondrial NADH dehydrogenase subunit 1 (nad1), NADH dehydrogenase subunit 5 (nad5) and cytochrome c oxidase subunit 1 (cox1) genes, respectively. This multiplex PCR accurately detected Echinococcus DNA without generating nonspecific reaction products. PCR products were of the expected sizes of 219 (nad1), 584 (nad5) and 471 (cox1) bp. Furthermore, the multiplex PCR enabled diagnosis of multiple infections using DNA of protoscoleces and copro-DNA extracted from fecal samples of canine hosts. Specificity of the multiplex PCR was 100% when evaluated using DNA isolated from other cestodes. Sensitivity thresholds were determined for DNA from protoscoleces and from worm eggs, and were calculated as 20 pg of DNA for E. granulosus and E. shiquicus, 10 pg of DNA for E. multilocularis, 2 eggs for E. granulosus, and 1 egg for E. multilocularis. Positive results with copro-DNA could be obtained at day 17 and day 26 after experimental infection of dogs with larval E. multilocularis and E. granulosus, respectively. Conclusions/Significance The multiplex PCR developed in this study is an efficient tool for discriminating E. granulosus, E. multilocularis and E. shiquicus from each other and from other taeniid cestodes. It can be used for the detection of canids infected with E. granulosus s.s. and E. multilocularis using feces collected from these definitive hosts. It can also be used for the identification of the Echinococcus metacestode larva in intermediate hosts, a stage that often cannot be identified to species on visual inspection.
Infection, Genetics and Evolution | 2016
Yan-Lei Fan; Zhongzi Lou; Li Li; Hongbin Yan; Quanyuan Liu; Fang Zhan; Jian-Qiu Li; Cong-Nuan Liu; Jin-Zhong Cai; Meng-Tong Lei; Wan-Gui Shi; Yurong Yang; Donald P. McManus; Wanzhong Jia
The metacestode of Echinococcus shiquicus has been recorded previously in the lung and liver of its intermediate host, the plateau pika (Ochotona curzoniae), but there is limited information regarding other organ sites. There is also limited evidence of intra-specific genetic variation within E. shiquicus. A PCR-amplified mitochondrial (mt) nad1 gene fragment (approximately 1400bp in size), with unique EcoRI and SspI restriction sites, was used to distinguish cysts or cyst-like lesions of E. shiquicus from E. multilocularis. Then, the complete mt nad1 and cox1 genes for the E. shiquicus isolates were amplified and sequenced. Phylogenetic tree and haplotype network analyses for the isolates were then generated based on a concatenated dataset of the nad1 and cox1 genes using the neighbour-joining (NJ) method and TCS1.21 software. Nineteen of eighty trapped pikas were found to harbor cysts (71 in total) when dissected at the survey site. Seventeen animals had cysts (fertile) present only in the lungs, one animal had fertile cysts in the lungs and spleen, and one individual had an infertile kidney cyst. Restriction endonuclease analysis of a fragment of the nad1 gene indicated all the cysts were due to E. shiquicus. Genetic diversity analysis revealed that the nad1 and cox1 genes varied by 0.1-1.2% and 0.1-1.0%, respectively. Haplotype network analysis of the concatenated nad1 and cox1 sequences of the isolates showed they were classified into at least 6 haplotypes, and different haplotype percentages ranged from 4.2% to 29.6%. Although, high haplotype diversity was evident in the study area, the complete nad1 and cox1 gene sequences obtained indicated that all samples represented isolates of E. shiquicus. The study has also provided a new PCR-restriction endonuclease-based method to rapidly distinguish E. shiquicus from E. multilocularis which provides a useful tool for epidemiological investigations where the two species overlap.
Parasitology International | 2006
Dominique A. Vuitton; Shao Ling Zhang; Yurong Yang; Véronique Godot; Isabelle Beurton; Georges Mantion; Solange Bresson-Hadni
Tropical Medicine and Health | 2007
Philip S. Craig; Christine M. Budke; Peter M. Schantz; Tiaoying Li; Jiamin Qiu; Yurong Yang; E. Zeyhle; M.T. Rogan; Akira Ito
Parasitology International | 2006
Patrick Giraudoux; David Pleydell; Francis Raoul; Jean-Pierre Quéré; Qian Wang; Yurong Yang; Dominique A. Vuitton; Jiamen Qiu; Wen Yang; Philip S. Craig
Parasites & Vectors | 2014
Xingwei Ni; Donald P. McManus; Hongbin Yan; Jifei Yang; Zhongzi Lou; Hongmin Li; Li Li; Meng-Tong Lei; Jin-Zhong Cai; Yan-Lei Fan; Chunhua Li; Quanyuan Liu; Wan-Gui Shi; Xu Liu; Yadong Zheng; Baoquan Fu; Yurong Yang; Wanzhong Jia
Infectious Diseases of Poverty | 2018
Cong-Nuan Liu; Yangyang Xu; Angela M. Cadavid-Restrepo; Zhongzi Lou; Hongbin Yan; Li Li; Baoquan Fu; Darren J. Gray; Archie Clements; T. S. Barnes; Gail M. Williams; Wan-Zhong Jia; Donald P. McManus; Yurong Yang