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Featured researches published by Adam Barker.


Diabetes | 2014

Impact of type 2 diabetes susceptibility variants on quantitative glycemic traits reveals mechanistic heterogeneity

Antigone S. Dimas; Vasiliki Lagou; Adam Barker; Joshua W. Knowles; Reedik Mägi; Marie-France Hivert; Andrea Benazzo; Denis Rybin; Anne U. Jackson; Heather M. Stringham; Ci Song; Antje Fischer-Rosinsky; Trine Welløv Boesgaard; Niels Grarup; Fahim Abbasi; Themistocles L. Assimes; Ke Hao; Xia Yang; Cécile Lecoeur; Inês Barroso; Lori L. Bonnycastle; Yvonne Böttcher; Suzannah Bumpstead; Peter S. Chines; Michael R. Erdos; Jürgen Graessler; Peter Kovacs; Mario A. Morken; Felicity Payne; Alena Stančáková

Patients with established type 2 diabetes display both β-cell dysfunction and insulin resistance. To define fundamental processes leading to the diabetic state, we examined the relationship between type 2 diabetes risk variants at 37 established susceptibility loci, and indices of proinsulin processing, insulin secretion, and insulin sensitivity. We included data from up to 58,614 nondiabetic subjects with basal measures and 17,327 with dynamic measures. We used additive genetic models with adjustment for sex, age, and BMI, followed by fixed-effects, inverse-variance meta-analyses. Cluster analyses grouped risk loci into five major categories based on their relationship to these continuous glycemic phenotypes. The first cluster (PPARG, KLF14, IRS1, GCKR) was characterized by primary effects on insulin sensitivity. The second cluster (MTNR1B, GCK) featured risk alleles associated with reduced insulin secretion and fasting hyperglycemia. ARAP1 constituted a third cluster characterized by defects in insulin processing. A fourth cluster (TCF7L2, SLC30A8, HHEX/IDE, CDKAL1, CDKN2A/2B) was defined by loci influencing insulin processing and secretion without a detectable change in fasting glucose levels. The final group contained 20 risk loci with no clear-cut associations to continuous glycemic traits. By assembling extensive data on continuous glycemic traits, we have exposed the diverse mechanisms whereby type 2 diabetes risk variants impact disease predisposition.


Diabetes | 2014

Common Genetic Variants Highlight the Role of Insulin Resistance and Body Fat Distribution in Type 2 Diabetes, Independent of Obesity

Robert A. Scott; Tove Fall; Dorota Pasko; Adam Barker; Stephen J. Sharp; Larraitz Arriola; Beverley Balkau; Aurelio Barricarte; Inês Barroso; Heiner Boeing; Françoise Clavel-Chapelon; Francesca L. Crowe; Jacqueline M. Dekker; Guy Fagherazzi; Ele Ferrannini; Nita G. Forouhi; Paul W. Franks; Diana Gavrila; Vilmantas Giedraitis; Sara Grioni; Leif Groop; Rudolf Kaaks; Timothy J. Key; Tilman Kühn; Luca A. Lotta; Peter Nilsson; Kim Overvad; Domenico Palli; Salvatore Panico; J. Ramón Quirós

We aimed to validate genetic variants as instruments for insulin resistance and secretion, to characterize their association with intermediate phenotypes, and to investigate their role in type 2 diabetes (T2D) risk among normal-weight, overweight, and obese individuals. We investigated the association of genetic scores with euglycemic-hyperinsulinemic clamp– and oral glucose tolerance test–based measures of insulin resistance and secretion and a range of metabolic measures in up to 18,565 individuals. We also studied their association with T2D risk among normal-weight, overweight, and obese individuals in up to 8,124 incident T2D cases. The insulin resistance score was associated with lower insulin sensitivity measured by M/I value (β in SDs per allele [95% CI], −0.03 [−0.04, −0.01]; P = 0.004). This score was associated with lower BMI (−0.01 [−0.01, −0.0]; P = 0.02) and gluteofemoral fat mass (−0.03 [−0.05, −0.02; P = 1.4 × 10−6) and with higher alanine transaminase (0.02 [0.01, 0.03]; P = 0.002) and γ-glutamyl transferase (0.02 [0.01, 0.03]; P = 0.001). While the secretion score had a stronger association with T2D in leaner individuals (Pinteraction = 0.001), we saw no difference in the association of the insulin resistance score with T2D among BMI or waist strata (Pinteraction > 0.31). While insulin resistance is often considered secondary to obesity, the association of the insulin resistance score with lower BMI and adiposity and with incident T2D even among individuals of normal weight highlights the role of insulin resistance and ectopic fat distribution in T2D, independently of body size.


Diabetes | 2011

Association of Genetic Loci With Glucose Levels in Childhood and Adolescence: A Meta-Analysis of Over 6,000 Children

Adam Barker; Stephen J. Sharp; Nicholas J. Timpson; Nabila Bouatia-Naji; Nicole M. Warrington; Stavroula Kanoni; Lawrence J. Beilin; Soren Brage; Panos Deloukas; David Evans; Anders Grøntved; Neelam Hassanali; Debbie A. Lawlor; Cécile Lecoeur; Ruth J. F. Loos; Stephen J. Lye; Mark McCarthy; Trevor A. Mori; Ndeye Coumba Ndiaye; John P. Newnham; Ioanna Ntalla; Craig E. Pennell; Beate St Pourcain; Inga Prokopenko; Susan M. Ring; Naveed Sattar; Sophie Visvikis-Siest; George Dedoussis; Lyle J. Palmer; Philippe Froguel

OBJECTIVE To investigate whether associations of common genetic variants recently identified for fasting glucose or insulin levels in nondiabetic adults are detectable in healthy children and adolescents. RESEARCH DESIGN AND METHODS A total of 16 single nucleotide polymorphisms (SNPs) associated with fasting glucose were genotyped in six studies of children and adolescents of European origin, including over 6,000 boys and girls aged 9–16 years. We performed meta-analyses to test associations of individual SNPs and a weighted risk score of the 16 loci with fasting glucose. RESULTS Nine loci were associated with glucose levels in healthy children and adolescents, with four of these associations reported in previous studies and five reported here for the first time (GLIS3, PROX1, SLC2A2, ADCY5, and CRY2). Effect sizes were similar to those in adults, suggesting age-independent effects of these fasting glucose loci. Children and adolescents carrying glucose-raising alleles of G6PC2, MTNR1B, GCK, and GLIS3 also showed reduced β-cell function, as indicated by homeostasis model assessment of β-cell function. Analysis using a weighted risk score showed an increase [β (95% CI)] in fasting glucose level of 0.026 mmol/L (0.021–0.031) for each unit increase in the score. CONCLUSIONS Novel fasting glucose loci identified in genome-wide association studies of adults are associated with altered fasting glucose levels in healthy children and adolescents with effect sizes comparable to adults. In nondiabetic adults, fasting glucose changes little over time, and our results suggest that age-independent effects of fasting glucose loci contribute to long-term interindividual differences in glucose levels from childhood onwards.


PLOS Genetics | 2014

A Central Role for GRB10 in Regulation of Islet Function in Man

Inga Prokopenko; Wenny Poon; Reedik Mägi; Rashmi Prasad B; S Albert Salehi; Peter Almgren; Peter Osmark; Nabila Bouatia-Naji; Nils Wierup; Tove Fall; Alena Stančáková; Adam Barker; Vasiliki Lagou; Clive Osmond; Weijia Xie; Jari Lahti; Anne U. Jackson; Yu Ching Cheng; Jie Liu; Jeffrey R. O'Connell; Paul A. Blomstedt; João Fadista; Sami Alkayyali; Tasnim Dayeh; Emma Ahlqvist; Jalal Taneera; Cécile Lecoeur; Ashish Kumar; Ola Hansson; Karin M Hansson

Variants in the growth factor receptor-bound protein 10 (GRB10) gene were in a GWAS meta-analysis associated with reduced glucose-stimulated insulin secretion and increased risk of type 2 diabetes (T2D) if inherited from the father, but inexplicably reduced fasting glucose when inherited from the mother. GRB10 is a negative regulator of insulin signaling and imprinted in a parent-of-origin fashion in different tissues. GRB10 knock-down in human pancreatic islets showed reduced insulin and glucagon secretion, which together with changes in insulin sensitivity may explain the paradoxical reduction of glucose despite a decrease in insulin secretion. Together, these findings suggest that tissue-specific methylation and possibly imprinting of GRB10 can influence glucose metabolism and contribute to T2D pathogenesis. The data also emphasize the need in genetic studies to consider whether risk alleles are inherited from the mother or the father.


Diabetic Medicine | 2011

Association of genetic Loci with glucose levels in childhood and adolescence

Adam Barker; Stephen J. Sharp; Nicholas J. Timpson; Nabila Bouatia-Naji; Nicole M. Warrington; Stavroula Kanoni; Lawrence J. Beilin; Soren Brage; Panos Deloukas; David Evans; Anders Grøntved; Neelam Hassanali; Debbie A. Lawlor; Cécile Lecoeur; Ruth J. F. Loos; Stephen J. Lye; Mark McCarthy; Trevor A. Mori; Ndeye Coumba Ndiaye; John P. Newnham; Ioanna Ntalla; Craig E. Pennell; M U B St Pourcain; Inga Prokopenko; Susan M. Ring; Naveed Sattar; Sophie Visvikis-Siest; George Dedoussis; Lyle J. Palmer; Philippe Froguel

OBJECTIVE To investigate whether associations of common genetic variants recently identified for fasting glucose or insulin levels in nondiabetic adults are detectable in healthy children and adolescents. RESEARCH DESIGN AND METHODS A total of 16 single nucleotide polymorphisms (SNPs) associated with fasting glucose were genotyped in six studies of children and adolescents of European origin, including over 6,000 boys and girls aged 9–16 years. We performed meta-analyses to test associations of individual SNPs and a weighted risk score of the 16 loci with fasting glucose. RESULTS Nine loci were associated with glucose levels in healthy children and adolescents, with four of these associations reported in previous studies and five reported here for the first time (GLIS3, PROX1, SLC2A2, ADCY5, and CRY2). Effect sizes were similar to those in adults, suggesting age-independent effects of these fasting glucose loci. Children and adolescents carrying glucose-raising alleles of G6PC2, MTNR1B, GCK, and GLIS3 also showed reduced β-cell function, as indicated by homeostasis model assessment of β-cell function. Analysis using a weighted risk score showed an increase [β (95% CI)] in fasting glucose level of 0.026 mmol/L (0.021–0.031) for each unit increase in the score. CONCLUSIONS Novel fasting glucose loci identified in genome-wide association studies of adults are associated with altered fasting glucose levels in healthy children and adolescents with effect sizes comparable to adults. In nondiabetic adults, fasting glucose changes little over time, and our results suggest that age-independent effects of fasting glucose loci contribute to long-term interindividual differences in glucose levels from childhood onwards.


Journal of the National Cancer Institute | 2015

Evidence of a Causal Association Between Insulinemia and Endometrial Cancer: A Mendelian Randomization Analysis

Kevin T. Nead; Stephen J. Sharp; Deborah Thompson; Jodie N. Painter; David B. Savage; Robert K. Semple; Adam Barker; John Perry; John Attia; Alison M. Dunning; Douglas F. Easton; Elizabeth G. Holliday; Luca A. Lotta; Tracy A. O’Mara; Mark McEvoy; Paul Pharoah; Rodney J. Scott; Amanda B. Spurdle; Claudia Langenberg; Nicholas J. Wareham; Robert A. Scott

Background: Insulinemia and type 2 diabetes (T2D) have been associated with endometrial cancer risk in numerous observational studies. However, the causality of these associations is uncertain. Here we use a Mendelian randomization (MR) approach to assess whether insulinemia and T2D are causally associated with endometrial cancer. Methods: We used single nucleotide polymorphisms (SNPs) associated with T2D (49 variants), fasting glucose (36 variants), fasting insulin (18 variants), early insulin secretion (17 variants), and body mass index (BMI) (32 variants) as instrumental variables in MR analyses. We calculated MR estimates for each risk factor with endometrial cancer using an inverse-variance weighted method with SNP-endometrial cancer associations from 1287 case patients and 8273 control participants. Results: Genetically predicted higher fasting insulin levels were associated with greater risk of endometrial cancer (odds ratio [OR] per standard deviation = 2.34, 95% confidence internal [CI] = 1.06 to 5.14, P = .03). Consistently, genetically predicted higher 30-minute postchallenge insulin levels were also associated with endometrial cancer risk (OR = 1.40, 95% CI = 1.12 to 1.76, P = .003). We observed no associations between genetic risk of type 2 diabetes (OR = 0.91, 95% CI = 0.79 to 1.04, P = .16) or higher fasting glucose (OR = 1.00, 95% CI = 0.67 to 1.50, P = .99) and endometrial cancer. In contrast, endometrial cancer risk was higher in individuals with genetically predicted higher BMI (OR = 3.86, 95% CI = 2.24 to 6.64, P = 1.2x10-6). Conclusion: This study provides evidence to support a causal association of higher insulin levels, independently of BMI, with endometrial cancer risk.


International Journal of Heat and Mass Transfer | 2000

Transient measurements of the heat transfer coefficient in unsteady, turbulent pipe flow

Adam Barker; John E. Ffowcs Williams

Abstract The ‘transient’ response of the heat transfer coefficient is investigated in turbulent and relaminarising, unsteady flow. We find that the response to sinusoidal perturbations collapse on a single parameter, ω + , and we use this scaling to develop an empirical model for predicting the response to non-sinusoidal changes. The model works well under fully turbulent conditions but fails when the flow relaminarises. We find no evidence of any mechanism that would lead to heat transfer enhancement over and beyond a quasi-steady effect. On the contrary, relaminarisation appears to decrease the average heat transfer in some unsteady flows.


Diabetes | 2011

Associations of Common Genetic Variants With Age-Related Changes in Fasting and Postload Glucose: Evidence From 18 Years of Follow-Up of the Whitehall II Cohort

Anders C. Jensen; Adam Barker; Meena Kumari; Eric Brunner; Mika Kivimäki; Aroon D. Hingorani; Nicholas J. Wareham; Adam G. Tabak; Daniel R. Witte; Claudia Langenberg

OBJECTIVE In the general, nondiabetic population, fasting glucose increases only slightly over time, whereas 2-h postload glucose shows a much steeper age-related rise. The reasons underlying these different age trajectories are unknown. We investigated whether common genetic variants associated with fasting and 2-h glucose contribute to age-related changes of these traits. RESEARCH DESIGN AND METHODS We studied 5,196 nondiabetic participants of the Whitehall II cohort (aged 40–78 years) attending up to four 5-yearly oral glucose tolerance tests. A genetic score was calculated separately for fasting and 2-h glucose, including 16 and 5 single nucleotide polymorphisms, respectively. Longitudinal modeling with age centered at 55 years was used to study the effects of each genotype and genetic score on fasting and 2-h glucose and their interactions with age, adjusting for sex and time-varying BMI. RESULTS The fasting glucose genetic score was significantly associated with fasting glucose with a 0.029 mmol/L (95% CI 0.023–0.034) difference (P = 2.76 × 10−21) per genetic score point, an association that remained constant over time (age interaction P = 0.17). Two-hour glucose levels differed by 0.076 mmol/L (0.047–0.105) per genetic score point (P = 3.1 × 10−7); notably, this effect became stronger with increasing age by 0.006 mmol/L (0.003–0.009) per genetic score point per year (age interaction P = 3.0 × 10−5), resulting in diverging age trajectories by genetic score. CONCLUSIONS Common genetic variants contribute to the age-related rise of 2-h glucose levels, whereas associations of variants for fasting glucose are constant over time, in line with stable age trajectories of fasting glucose.


Best Practice & Research Clinical Endocrinology & Metabolism | 2012

Genetic determinants of glucose homeostasis

Adam Barker; Claudia Langenberg; Nicholas J. Wareham

Type 2 diabetes is a complex metabolic disorder characterised by varying degrees of impairment in insulin secretion and resistance to the action of insulin. Considerable progress has been made recently in understanding the genetic determinants of diabetes. A logical next step is to describe how these variants relate to the underlying pathophysiological processes that lead to diabetes as this may provide insights into pathways to disease. These quantitative traits are, of course, of direct interest in themselves and a growing literature is now emerging on the genetic determinants of insulin secretion and insulin resistance. This review article focuses on describing the complex associations between type 2 diabetes risk variants and quantitative glycaemic traits and the relationship between variants initially discovered in association studies of these traits and risk of type 2 diabetes.


WOS | 2014

Impact of Type 2 Diabetes Susceptibility Variants on Quantitative Glycemic Traits Reveals Mechanistic Heterogeneity

Antigone S. Dimas; Vasiliki Lagou; Adam Barker; Joshua W. Knowles; Reedik Maegi; Marie-France Hivert; Andrea Benazzo; Denis Rybin; Anne U. Jackson; Heather M. Stringham; Ci Song; Antje Fischer-Rosinsky; Trine Welløv Boesgaard; Niels Grarup; Fahim Abbasi; Themistocles L. Assimes; Ke Hao; Xia Yang; Cécile Lecoeur; Inês Barroso; Lori L. Bonnycastle; Yvonne Boettcher; Suzannah Bumpstead; Peter S. Chines; Michael R. Erdos; Jürgen Graessler; Peter Kovacs; Mario A. Morken; Felicity Payne; Alena Stančáková

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Inês Barroso

Wellcome Trust Sanger Institute

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