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Dive into the research topics where Amiya K. Patra is active.

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Featured researches published by Amiya K. Patra.


Journal of Experimental Medicine | 2011

NFATc1 affects mouse splenic B cell function by controlling the calcineurin--NFAT signaling network.

Sankar Bhattacharyya; Jolly Deb; Amiya K. Patra; Duong Anh Thuy Pham; Wen Chen; Martin Vaeth; Friederike Berberich-Siebelt; Stefan Klein-Hessling; Edward D. Lamperti; Kurt Reifenberg; Julia Jellusova; Astrid Schweizer; Lars Nitschke; Ellen Leich; Andreas Rosenwald; Cornelia Brunner; Swen Engelmann; Ursula Bommhardt; Andris Avots; Martin Müller; Eisaku Kondo; Edgar Serfling

Mouse B cells lacking NFATc1 exhibit defective proliferation, survival, isotype class switching, cytokine production, and T cell help.


Journal of Immunology | 2003

Constitutively Active Protein Kinase B Enhances Lck and Erk Activities and Influences Thymocyte Selection and Activation

Shin-Young Na; Amiya K. Patra; Yvonne Scheuring; Alexander Marx; Mauro Tolaini; Dimitris Kioussis; Brian Hemmings; Thomas Hünig; Ursula Bommhardt

Protein kinase B (PKB), a serine threonine kinase is critically involved in cellular proliferation and survival. To characterize its role in T cell development in vivo, we have analyzed transgenic mice that express a membrane-targeted constitutively active version of PKB (myr PKB) in thymocytes and peripheral T cells. We report that myr PKB renders proliferative responses of thymocytes more sensitive to TCR signals by increased and sustained activation of Src kinase Lck and the extracellular signal-regulated kinase/mitogen-activated protein kinase pathway. In addition, the proliferative response of myr PKB T cells is relatively independent of calcium mobilization and calcineurin activity. We also find that myr PKB enhances phosphorylation of glycogen synthase kinase 3, a negative regulator of NFAT and T cell activation, and the recruitment of the adapter protein Cbl-c. Interestingly, we demonstrate that upon TCR/CD3 stimulation of wild-type T cells PKB is translocated into lipid rafts, adding a new role for PKB in TCR-initiated signalosome formation in T cell activation. Localization of transgenic PKB in lipid rafts could contribute to the higher TCR sensitivity of myr PKB thymocytes which is reflected in an increase in positive selection toward the CD4 lineage and variable effects on negative selection depending on the model system analyzed. Thus, our observations clearly indicate a cross-talk between PKB and important signaling molecules downstream of TCR that modulate the thresholds of thymocyte selection and T cell activation.


Journal of Immunology | 2004

Active protein kinase B regulates TCR responsiveness by modulating cytoplasmic-nuclear localization of NFAT and NF-kappa B proteins.

Amiya K. Patra; Shin Young Na; Ursula Bommhardt

T cell activation leads to the induction of the transcription factors of the NFAT and NF-κB families, important regulators of T cell activation and function. In this study we demonstrate that TCR/CD3-stimulated T cells from mice expressing a constitutively active form of protein kinase B (myr PKBα) lack significant nuclear accumulation/shuttling of NFATc1 and NFATp as well as NF-κΒp65 and RelB proteins. Notably, despite this deficit in nuclear NFAT and NF-κB proteins, myr PKB T cells show lower activation threshold for proliferation, enhanced cell cycle progression and increased production of Th1 and Th2 cytokines similar to signals provided by CD28 costimulation. The enhanced T cell response correlates with increased expression of cyclins D3 and B1 and cytokine-induced Src homology 2 protein, and inactivation of the forkhead transcription factor FKHR. In addition, coimmunoprecipitation studies indicate a direct regulation of NFATc1 by active PKB. Together, our results demonstrate that the positive regulatory role of myr PKB on TCR responsiveness, subsequent cell division, and effector function is linked to a negative regulatory mechanism on the nuclear accumulation/shuttling of NFAT and NF-κΒ proteins.


Nature Immunology | 2013

An alternative NFAT-activation pathway mediated by IL-7 is critical for early thymocyte development

Amiya K. Patra; Andris Avots; René P. Zahedi; Thomas Schüler; Albert Sickmann; Ursula Bommhardt; Edgar Serfling

Interleukin 7 (IL-7) has a critical role in the development of early CD4−CD8− double-negative (DN) thymocytes. Although the transcription factor STAT5 is an important component of IL-7 signaling, differences in the phenotypes of mice deficient in STAT5, IL-7, IL-7 receptor alpha (IL-7rα) or the kinase Jak3 suggest the existence of STAT5-independent IL-7 signaling. Here we found that IL-7–Jak3 signals activated the transcription factor NFATc1 in DN thymocytes by phosphorylating Tyr371 in the regulatory region of NFATc1. This NFAT-activation pathway was critical for the survival and development of DN thymocytes, as deficiency in NFATc1 blocked thymocyte development at the DN1 stage, leading to T cell lymphopenia. In addition, our results demonstrated a cooperative function for NFATc1 and STAT5 in guiding thymocyte development in response to IL-7 signals.


Journal of Immunology | 2006

PKB Rescues Calcineurin/NFAT-Induced Arrest of Rag Expression and Pre-T Cell Differentiation

Amiya K. Patra; Thomas Drewes; Swen Engelmann; Sergei Chuvpilo; Hiroyuki Kishi; Thomas Hünig; Edgar Serfling; Ursula Bommhardt

Protein kinase B (PKB), an Ag receptor activated serine-threonine kinase, controls various cellular processes including proliferation and survival. However, PKB function in thymocyte development is still unclear. We report PKB as an important negative regulator of the calcineurin (CN)-regulated transcription factor NFAT in early T cell differentiation. Expression of a hyperactive version of CN induces a profound block at the CD25+CD44− double-negative (DN) 3 stage of T cell development. We correlate this arrest with up-regulation of Bcl-2, CD2, CD5, and CD27 proteins and constitutive activation of NFAT but a severe impairment of Rag1, Rag2, and intracellular TCR-β as well as intracellular TCR-γδ protein expression. Intriguingly, simultaneous expression of active myristoylated PKB inhibits nuclear NFAT activity, restores Rag activity, and enables DN3 cells to undergo normal differentiation and expansion. A correlation between the loss of NFAT activity and Rag1 and Rag2 expression is also found in myristoylated PKB-induced CD4+ lymphoma cells. Furthermore, ectopic expression of NFAT inhibits Rag2 promoter activity in EL4 cells, and in vivo binding of NFATc1 to the Rag1 and Rag2 promoter and cis-acting transcription regulatory elements is verified by chromatin immunoprecipitation analysis. The regulation of CN/NFAT signaling by PKB may thus control receptor regulated changes in Rag expression and constitute a signaling pathway important for differentiation processes in the thymus and periphery.


Journal of Immunology | 2013

NFATc1 Induction in Peripheral T and B Lymphocytes

Matthias Hock; Martin Vaeth; Ronald Rudolf; Amiya K. Patra; Duong Anh Thuy Pham; Khalid Muhammad; Tobias Pusch; Tobias Bopp; Edgar Schmitt; Friederike Berberich-Siebelt; Dimitri Tyrsin; Sergei Chuvpilo; Andris Avots; Edgar Serfling; Stefan Klein-Hessling

NFAT transcription factors control the proliferation and survival of peripheral lymphocytes. We have reported previously that the short isoform NFATc1/αA whose generation is induced by immune receptor stimulation supports the proliferation and inhibits the activation-induced cell death of peripheral T and B cells. We will show in this study that in novel bacterial artificial chromosome transgenic mice that express EGFP under the control of entire Nfatc1 locus the Nfatc1/Egfp transgene is expressed as early as in double-negative thymocytes and in nonstimulated peripheral T and B cells. Upon immune receptor stimulation, Nfatc1/Egfp expression is elevated in B, Th1, and Th2 cells, but only weakly in T regulatory, Th9, and Th17 cells in vitro whose generation is affected by TGFβ. In naive lymphocytes, persistent immune receptor signals led to a 3–5 increase in NFATc1/αA RNA levels during primary and secondary stimulation, but a much stronger induction was observed at the protein level. Whereas anti-CD3+CD28 stimulation of primary T cells induces both NFATc1/αA and their proliferation and survival, anti-IgM stimulation of B cells induces NFATc1/αA and proliferation, but activation-induced cell death after 3-d incubation in vitro. The anti-IgM–mediated activation-induced cell death induction of B cells in vitro is suppressed by anti-CD40–, LPS-, and CpG-mediated signals. In addition to inducing NF-κB factors, together with anti-IgM, these signals also support the generation of NFATc1/αA. According to these data and the architecture of its promoter region, the Nfatc1 gene resembles a primary response gene whose induction is affected at the posttranscriptional level.


Frontiers in Immunology | 2014

Architecture and expression of the Nfatc1 gene in lymphocytes

Ronald Rudolf; Rhoda Busch; Amiya K. Patra; Khalid Muhammad; Andris Avots; Jean-Christophe Andrau; Stefan Klein-Hessling; Edgar Serfling

In lymphocytes, the three NFAT factors NFATc1 (also designated as NFAT2), NFATc2 (NFAT1), and NFATc3 (NFAT4 or NFATx) are expressed and are the targets of immune receptor signals, which lead to a rapid rise of intracellular Ca++, the activation of phosphatase calcineurin, and to the activation of cytosolic NFATc proteins. In addition to rapid activation of NFAT factors, immune receptor signals lead to accumulation of the short NFATc1/αA isoform in lymphocytes which controls their proliferation and survival. In this mini-review, we summarize our current knowledge on the structure and transcription of the Nfatc1 gene in lymphocytes, which is controlled by two promoters, two poly A addition sites and a remote downstream enhancer. The Nfatc1 gene resembles numerous primary response genes (PRGs) induced by LPS in macrophages. Similar to the PRG promoters, the Nfatc1 promoter region is organized in CpG islands, forms DNase I hypersensitive sites, and is marked by histone tail modifications before induction. By studying gene induction in lymphocytes in detail, it will be important to elucidate whether the properties of the Nfatc1 induction are not only typical for the Nfatc1 gene but also for other transcription factor genes expressed in lymphocytes.


Nature Communications | 2017

NFATc1 controls the cytotoxicity of CD8+ T cells

Stefan Klein-Hessling; Khalid Muhammad; Matthias Klein; Tobias Pusch; Ronald Rudolf; Jessica Flöter; Musga Qureischi; Andreas Beilhack; Martin Vaeth; Carsten Kummerow; Christian S. Backes; Rouven Schoppmeyer; Ulrike Hahn; Markus Hoth; Tobias Bopp; Friederike Berberich-Siebelt; Amiya K. Patra; Andris Avots; Nora Müller; Almut Schulze; Edgar Serfling

Cytotoxic T lymphocytes are effector CD8+ T cells that eradicate infected and malignant cells. Here we show that the transcription factor NFATc1 controls the cytotoxicity of mouse cytotoxic T lymphocytes. Activation of Nfatc1−/− cytotoxic T lymphocytes showed a defective cytoskeleton organization and recruitment of cytosolic organelles to immunological synapses. These cells have reduced cytotoxicity against tumor cells, and mice with NFATc1-deficient T cells are defective in controlling Listeria infection. Transcriptome analysis shows diminished RNA levels of numerous genes in Nfatc1−/− CD8+ T cells, including Tbx21, Gzmb and genes encoding cytokines and chemokines, and genes controlling glycolysis. Nfatc1−/−, but not Nfatc2−/− CD8+ T cells have an impaired metabolic switch to glycolysis, which can be restored by IL-2. Genome-wide ChIP-seq shows that NFATc1 binds many genes that control cytotoxic T lymphocyte activity. Together these data indicate that NFATc1 is an important regulator of cytotoxic T lymphocyte effector functions.NFAT nuclear translocation has been shown to be required for CD8+ T cell cytokine production in response to viral infection. Here the authors show NFATc1 controls the cytotoxicity and metabolic switching of activated CD8+ T cells required for optimal response to bacteria and tumor cells.


European Journal of Immunology | 2014

NF-κB factors control the induction of NFATc1 in B lymphocytes

Khalid Muhammad; Hani Alrefai; Ralf Marienfeld; Duong Anh Thuy Pham; Krisna Murti; Amiya K. Patra; Andris Avots; Valesca Bukur; Ugur Sahin; Eisaku Kondo; Stefan Klein-Hessling; Edgar Serfling

In peripheral lymphocytes, the transcription factors (TFs) NF‐κB, NFAT, and AP‐1 are the prime targets of signals that emerge from immune receptors. Upon activation, these TFs induce gene networks that orchestrate the growth, expansion, and effector function of peripheral lymphocytes. NFAT and NF‐κB factors share several properties, such as a similar mode of induction and architecture in their DNA‐binding domain, and there is a subgroup of κB‐like DNA promoter motifs that are bound by both types of TFs. However, unlike NFAT and AP‐1 factors that interact and collaborate in binding to DNA, NFAT, and NF‐κB seem neither to interact nor to collaborate. We show here that NF‐κB1/p50 and c‐Rel, the most prominent NF‐κB proteins in BCR‐induced splenic B cells, control the induction of NFATc1/αA, a prominent short NFATc1 isoform. In part, this is mediated through two composite κB/NFAT‐binding sites in the inducible Nfatc1 P1 promoter that directs the induction of NFATc1/αA by BCR signals. In concert with coreceptor signals that induce NF‐κB factors, BCR signaling induces a persistent generation of NFATc1/αA. These data suggest a tight connection between NFATc1 and NF‐κB induction in B lymphocytes contributing to the effector function of peripheral B cells.


Nature Communications | 2016

NFATc1 supports imiquimod-induced skin inflammation by suppressing IL-10 synthesis in B cells

Hani Alrefai; Khalid Muhammad; Ronald Rudolf; Duong Anh Thuy Pham; Stefan Klein-Hessling; Amiya K. Patra; Andris Avots; Valesca Bukur; Ugur Sahin; Stefan Tenzer; Matthias Goebeler; Andreas Kerstan; Edgar Serfling

Epicutaneous application of Aldara cream containing the TLR7 agonist imiquimod (IMQ) to mice induces skin inflammation that exhibits many aspects of psoriasis, an inflammatory human skin disease. Here we show that mice depleted of B cells or bearing interleukin (IL)-10-deficient B cells show a fulminant inflammation upon IMQ exposure, whereas ablation of NFATc1 in B cells results in a suppression of Aldara-induced inflammation. In vitro, IMQ induces the proliferation and IL-10 expression by B cells that is blocked by BCR signals inducing NFATc1. By binding to HDAC1, a transcriptional repressor, and to an intronic site of the Il10 gene, NFATc1 suppresses IL-10 expression that dampens the production of tumour necrosis factor-α and IL-17 by T cells. These data indicate a close link between NFATc1 and IL-10 expression in B cells and suggest NFATc1 and, in particular, its inducible short isoform, NFATc1/αA, as a potential target to treat human psoriasis.

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Andris Avots

University of Würzburg

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Ursula Bommhardt

Otto-von-Guericke University Magdeburg

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Hani Alrefai

University of Würzburg

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