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Dive into the research topics where Blake A. Schaeffer is active.

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Featured researches published by Blake A. Schaeffer.


Environmental Science & Technology | 2012

An approach to developing numeric water quality criteria for coastal waters using the SeaWiFS Satellite Data Record.

Blake A. Schaeffer; James D. Hagy; Robyn N. Conmy; John C. Lehrter; Richard P. Stumpf

Human activities on land increase nutrient loads to coastal waters, which can increase phytoplankton production and biomass and associated ecological impacts. Numeric nutrient water quality standards are needed to protect coastal waters from eutrophication impacts. The Environmental Protection Agency determined that numeric nutrient criteria were necessary to protect designated uses of Florida’s waters. The objective of this study was to evaluate a reference condition approach for developing numeric water quality criteria for coastal waters, using data from Florida. Florida’s coastal waters have not been monitored comprehensively via field sampling to support numeric criteria development. However, satellite remote sensing had the potential to provide adequate data. Spatial and temporal measures of SeaWiFS OC4 chlorophyll-a (ChlRS-a, mg m–3) were resolved across Florida’s coastal waters between 1997 and 2010 and compared with in situ measurements. Statistical distributions of ChlRS-a were evaluated to determine a quantitative reference baseline. A binomial approach was implemented to consider how new data could be assessed against the criteria. The proposed satellite remote sensing approach to derive numeric criteria may be generally applicable to other coastal waters.


Journal of remote sensing | 2013

Barriers to adopting satellite remote sensing for water quality management

Blake A. Schaeffer; Kelly G. Schaeffer; Darryl J. Keith; Ross S. Lunetta; Robyn N. Conmy; Richard W. Gould

Sustainable practices require a long-term commitment to creating solutions to environmental, social, and economic issues. The most direct way to ensure that management practices achieve sustainability is to monitor the environment. Remote sensing technology has the potential to accelerate the engagement of communities and managers in the implementation and performance of best management practices. Over the last few decades, satellite technology has allowed measurements on a global scale over long time periods, and is now proving useful in coastal waters, estuaries, lakes, and reservoirs, which are relevant to water quality managers. Comprehensive water quality climate data records have the potential to provide rapid water quality assessments, thus providing new and enhanced decision analysis methodologies and improved temporal/spatial diagnostics. To best realize the full application potential of these emerging technologies an open and effective dialogue is needed between scientists, policy makers, environmental managers, and stakeholders at the federal, state, and local levels. Results from an internal US Environmental Protection Agency qualitative survey were used to determine perceptions regarding the use of satellite remote sensing for monitoring water quality. The goal of the survey was to begin understanding why management decisions do not typically rely on satellite-derived water quality products.


Journal of remote sensing | 2014

Remote sensing of selected water-quality indicators with the hyperspectral imager for the coastal ocean HICO sensor

Darryl J. Keith; Blake A. Schaeffer; Ross S. Lunetta; Richard W. Gould; Kenneth Rocha; Donald Cobb

The Hyperspectral Imager for the Coastal Ocean (HICO) offers the coastal environmental monitoring community an unprecedented opportunity to observe changes in coastal and estuarine water quality across a range of spatial scales not feasible with traditional field-based monitoring or existing ocean colour satellites. HICO, an Office of Naval Research-sponsored programme, is the first space-based maritime hyperspectral imaging instrument designed specifically for the coastal ocean. HICO has been operating since September 2009 from the Japanese Experiment Module – Exposed Facility on the International Space Station (ISS). The high pixel resolution (approximately 95 m at nadir) and hyperspectral imaging capability offer a unique opportunity for characterizing a wide range of water colour constituents that could be used to assess environmental condition. In this study, we transform atmospherically corrected ISS/HICO hyperspectral imagery and derive environmental response variables routinely used for evaluating the environmental condition of coastal ecosystem resources. Using atmospherically corrected HICO imagery and a comprehensive field validation programme, three regionally specific algorithms were developed to estimate basic water-quality properties traditionally measured by monitoring agencies. Results indicated that a three-band chlorophyll a algorithm performed best (R2 = 0.62) when compared with in situ measurement data collected 2–4 hours of HICO acquisitions. Coloured dissolved organic matter (CDOM) (R2 = 0.93) and turbidity (R2 = 0.67) were also highly correlated. The distributions of these water-quality indicators were mapped for four estuaries along the northwest coast of Florida from April 2010 to May 2012. However, before the HICO sensor can be transitioned from proof-of-concept to operational status and its data applied to benefit decisions made by coastal managers, problems with vicarious calibration of the sensor need to be resolved and standardized protocols are required for atmospheric correction. Ideally, the sensor should be placed on a polar orbiting platform for greater spatial and temporal coverage as well as for image synchronization with field validation efforts.


Journal of Phycology | 2007

A COMPARISON OF PHOTORESPONSE AMONG TEN DIFFERENT KARENIA BREVIS (DINOPHYCEAE) ISOLATES1

Blake A. Schaeffer; Daniel Kamykowski; Laurie McKay; Geoff Sinclair; Edward J. Milligan

Many laboratories have solely used the Wilson isolate to physiologically characterize the harmful algal bloom (HAB) dinoflagellate Karenia brevis (C. C. Davis) G. Hansen et Moestrup. However, analysis of one isolate may lead to misinterpretations when extrapolating measurements to field populations. In this study, pulse‐amplitude‐modulated chlorophyll fluorometer (PAM‐FL) relative electron transport rate (ETR), Fv/Fm, and chl were compared with traditional techniques, such as 14C photosynthesis versus irradiance (P–E) curves, DCMU [3‐(3′,4′‐dichlorophenyl)‐1,1‐dimethyl urea] Fv/Fm, and extracted chl. The DCMU and PAM‐FL values of Fv/Fm (r2 = 0.51) and chl (r2 = 0.58) were in good agreement. There was no correlation between 14C and PAM‐FL α, Pmax, and β parameters because PAM‐FL ETR was only a relative measurement. The PAM‐FL techniques were then used to investigate P–E curves, quantum yield of PSII (Fv/Fm), and chl from 10 K. brevis isolates to determine whether one or all isolates would better represent the species. Comparisons were made with a radial photosynthetron, which allowed for controlled conditions of light and temperature. Isolate α, Pmax, and β varied between 0.097 and 0.204 μmol e− · m−2 · s−1 · (μmol quanta · m−2 · s−1)−1, 80.41 and 241 μmol e− · m−2 · s−1, and 0.005 and 0.160 μmol e− · m−2 · s−1 · (μmol quanta · m−2 · s−1)−1, respectively. Either carbon limitation and/or bacterial negative feedback were implicated as the cause of the P–E parameter variability. Furthermore, these results directly contradicted some literature suggestions that K. brevis is a low‐light‐adapted dinoflagellate. Results showed that K. brevis was more than capable of utilizing and surviving in light conditions that may be present on cloudless days off Florida.


Marine Pollution Bulletin | 2012

Phytoplankton community composition in nearshore coastal waters of Louisiana.

Blake A. Schaeffer; Janis C. Kurtz; Michael K. Hein

Phytoplankton community compositions within near-shore coastal and estuarine waters of Louisiana were characterized by group diversity, evenness, relative abundance and biovolume. Sixty-six taxa were identified in addition to eight potentially harmful algal genera including Gymnodinium sp. Phytoplankton group diversity was lowest at Vermillion Bay in February 2008, but otherwise ranged between 2.16 and 3.40. Phytoplankton evenness was also lowest at Vermillion Bay in February 2008, but otherwise ranged between 0.54 and 0.77. Dissolved oxygen increased with increased biovolume (R² = 0.85, p < 0.001) and biovolume decreased with increased light attenuation (R² = 0.34, p = 0.007), which supported the importance of light in regulating oxygen dynamics. Diatoms were dominant in relative abundance and biovolume at almost all stations and all cruises. Brunt-Väisälä frequency was used as a measure of water column stratification and was negatively correlated (p = 0.02) to diatom relative percent total abundance.


Journal of Phycology | 2009

Lipid class, carotenoid, and toxin dynamics of Karenia brevis (Dinophyceae) during diel vertical migration.

Blake A. Schaeffer; Daniel Kamykowski; Laurie McKay; Geoff Sinclair; Edward J. Milligan

The internal lipid, carotenoid, and toxin concentrations of Karenia brevis (C. C. Davis) Gert Hansen and Moestrup are influenced by its ability to use ambient light and nutrients for growth and reproduction. This study investigated changes in K. brevis toxicity, lipid class, and carotenoid concentrations in low‐light, nitrate‐replete (250 μmol quanta · m−2 · s−1, 80 μM NO3); high‐light, nitrate‐replete (960 μmol quanta · m−2 · s−1, 80 μM NO3); and high‐light, nitrate‐reduced (960 μmol quanta · m−2 · s−1, <5 μM NO3) mesocosms. Reverse‐phase HPLC quantified the epoxidation state (EPS) of the xanthophyll‐cycle pigments diadinoxanthin and diatoxanthin, and a Chromarod Iatroscan thin layer chromatography/flame ionization detection (TLC/FID) system quantified changes in lipid class concentrations. EPS did not exceed 0.20 in the low‐light mesocosm, but increased to 0.65 in the high‐light mesocosms. Triacylglycerol and monogalactosyldiacylglycerol (MGDG) were the largest lipid classes consisting of 9.3% to 48.7% and 37.3% to 69.7% of total lipid, respectively. Both lipid classes also experienced the greatest concentration changes in high‐light experiments. K. brevis increased EPS and toxin concentrations while decreasing its lipid concentrations under high light. K. brevis may mobilize its toxins into the surrounding environment by reducing lipid concentrations, such as sterols, limiting competition, or toxins are released because lipids are decreased in high light, reducing any protective mechanism against their own toxins.


Giscience & Remote Sensing | 2014

Performance evaluation of normalized difference chlorophyll index in northern Gulf of Mexico estuaries using the Hyperspectral Imager for the Coastal Ocean

Deepak R. Mishra; Blake A. Schaeffer; Darryl J. Keith

The Hyperspectral Imager for the Coastal Ocean (HICO) was used to derive chlorophyll-a (chl-a) based on the normalized difference chlorophyll index (NDCI) in two Gulf of Mexico coastal estuaries. Chl-a data were acquired from discrete in situ water sample analysis and above-water hyperspectral surface acquisition system (HyperSAS) remote sensing reflectance in Pensacola Bay (PB) and Choctawhatchee Bay (CB). NDCI algorithm calibrations and validations were completed on HICO data. Linear and best-fit (polynomial) calibrations performed strongly with R2 of 0.90 and 0.96, respectively. The best validation of NDCI resulted with an R2 of 0.74 and root-mean-square error (RMSE) of 1.64 µg/L. A strong spatial correspondence was observed between NDCI and chl-a, with higher NDCI associated with higher chl-a and these areas were primarily located in the northern PB and eastern CB at the river mouths. NDCI could be effectively used as a qualitative chl-a monitoring tool with a reduced need for site-specific calibration.


Marine Pollution Bulletin | 2011

Organic and inorganic matter in Louisiana coastal waters: Vermilion, Atchafalaya, Terrebonne, Barataria, and Mississippi regions.

Blake A. Schaeffer; Robyn N. Conmy; Jessica Aukamp; George Craven; Erin J. Ferer

Chromophoric dissolved organic matter (CDOM) spectral absorption, dissolved organic carbon (DOC) concentration, and the particulate fraction of inorganic (PIM) and organic matter (POM) were measured in Louisiana coastal waters at Vermilion, Atchafalaya, Terrebonne, Barataria, and Mississippi River locations, in 2007-2008. The range of CDOM was 0.092 m⁻¹ at Barataria in June 2008 to 11.225 m⁻¹ at Mississippi in February 2008. An indicator of organic matter quality was predicted by the spectral slope of absorption coefficients from 350 to 412nm which was between 0.0087 m⁻¹ at Mississippi in May 2008 and 0.0261 m⁻¹ at Barataria in June 2008. CDOM was the dominant component of light attenuation at Terrebonne and Barataria. Detritus and CDOM were the primary components of light attenuation at Vermilion, Atchafalaya, and Mississippi. DOC ranged between 65 and 1235 μM. PIM ranged between 1.1 and 426.3 mg L⁻¹ and POM was between 0.3 and 49.6 mg L⁻¹.


Ecological Indicators | 2017

Satellite Monitoring of Cyanobacterial Harmful Algal Bloom Frequency in Recreational Waters and Drinking Water Sources

John M. Clark; Blake A. Schaeffer; John A. Darling; Erin A. Urquhart; John M. Johnston; Amber R. Ignatius; Mark H. Myer; Keith A. Loftin; P. Jeremy Werdell; Richard P. Stumpf

Cyanobacterial harmful algal blooms (cyanoHAB) cause extensive problems in lakes worldwide, including human and ecological health risks, anoxia and fish kills, and taste and odor problems. CyanoHABs are a particular concern in both recreational waters and drinking source waters because of their dense biomass and the risk of exposure to toxins. Successful cyanoHAB assessment using satellites may provide an indicator for human and ecological health protection, In this study, methods were developed to assess the utility of satellite technology for detecting cyanoHAB frequency of occurrence at locations of potential management interest. The European Space Agencys MEdium Resolution Imaging Spectrometer (MERIS) was evaluated to prepare for the equivalent series of Sentine1-3 Ocean and Land Colour Imagers (OLCI) launched in 2016 as part of the Copernicus program. Based on the 2012 National Lakes Assessment site evaluation guidelines and National Hydrography Dataset, the continental United States contains 275,897 lakes and reservoirs >1 hectare in area. Results from this study show that 5.6 % of waterbodies were resolvable by satellites with 300 m single-pixel resolution and 0.7 % of waterbodies were resolvable when a three by three pixel (3×3-pixel) array was applied based on minimum Euclidian distance from shore. Satellite data were spatially joined to U.S. public water surface intake (PWSI) locations, where single-pixel resolution resolved 57% of the PWSI locations and a 3×3-pixel array resolved 33% of the PWSI locations. Recreational and drinking water sources in Florida and Ohio were ranked from 2008 through 2011 by cyanoHAB frequency above the World Health Organizations (WHO) high threshold for risk of 100,000 cells mL-1. The ranking identified waterbodies with values above the WHO high threshold, where Lake Apopka, FL (99.1 %) and Grand Lake St. Marys, OH (83 %) had the highest observed bloom frequencies per region. The method presented here may indicate locations with high exposure to cyanoHABs and therefore can be used to assist in prioritizing management resources and actions for recreational and drinking water sources.


Harmful Algae | 2017

A method for examining temporal changes in cyanobacterial harmful algal bloom spatial extent using satellite remote sensing

Erin A. Urquhart; Blake A. Schaeffer; Richard P. Stumpf; Keith A. Loftin; P. Jeremy Werdell

Cyanobacterial harmful algal blooms (CyanoHAB) are thought to be increasing globally over the past few decades, but relatively little quantitative information is available about the spatial extent of blooms. Satellite remote sensing provides a potential technology for identifying cyanoHABs in multiple water bodies and across geo-political boundaries. An assessment method was developed using MEdium Resolution Imaging Spectrometer (MERIS) imagery to quantify cyanoHAB surface area extent, transferable to different spatial areas, in Florida, Ohio, and California for the test period of 2008 to 2012. Temporal assessment was used to evaluate changes in satellite resolvable inland waterbodies for each state of interest. To further assess cyanoHAB risk within the states, the World Health Organization’s (WHO) recreational guidance level thresholds were used to categorize surface area of cyanoHABs into three risk categories: low, moderate, and high-risk bloom area. Results showed that in Florida, the area of cyanoHABs increased largely due to observed increases in high-risk bloom area. California exhibited a slight decrease in cyanoHAB extent, primarily attributed to decreases in Northern California. In Ohio (excluding Lake Erie), little change in cyanoHAB surface area was observed. This study uses satellite remote sensing to quantify changes in inland cyanoHAB surface area across numerous water bodies within an entire state. The temporal assessment method developed here will be relevant into the future as it is transferable to the Ocean Land Colour Instrument (OLCI) on Sentinel-3A/3B missions.

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John C. Lehrter

United States Environmental Protection Agency

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Daniel Kamykowski

North Carolina State University

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Chuanmin Hu

University of South Florida St. Petersburg

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Darryl J. Keith

United States Environmental Protection Agency

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James D. Hagy

United States Environmental Protection Agency

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Robyn N. Conmy

United States Environmental Protection Agency

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Ross S. Lunetta

United States Environmental Protection Agency

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Edward J. Milligan

North Carolina State University

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Michael C. Murrell

United States Environmental Protection Agency

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