Cameron J. Mackie
Leiden University
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Featured researches published by Cameron J. Mackie.
Journal of Chemical Physics | 2015
Cameron J. Mackie; Alessandra Candian; Xinchuan Huang; Elena Maltseva; Annemieke Petrignani; Jos Oomens; Wybren Jan Buma; Timothy J. Lee; A. G. G. M. Tielens
Current efforts to characterize and study interstellar polycyclic aromatic hydrocarbons (PAHs) rely heavily on theoretically predicted infrared (IR) spectra. Generally, such studies use the scaled harmonic frequencies for band positions and double harmonic approximation for intensities of species, and then compare these calculated spectra with experimental spectra obtained under matrix isolation conditions. High-resolution gas-phase experimental spectroscopic studies have recently revealed that the double harmonic approximation is not sufficient for reliable spectra prediction. In this paper, we present the anharmonic theoretical spectra of three PAHs: naphthalene, anthracene, and tetracene, computed with a locally modified version of the SPECTRO program using Cartesian derivatives transformed from Gaussian 09 normal coordinate force constants. Proper treatments of Fermi resonances lead to an impressive improvement on the agreement between the observed and theoretical spectra, especially in the C-H stretching region. All major IR absorption features in the full-scale matrix-isolated spectra, the high-temperature gas-phase spectra, and the most recent high-resolution gas-phase spectra obtained under supersonically cooled molecular beam conditions in the CH-stretching region are assigned.
The Astrophysical Journal | 2015
Elena Maltseva; Annemieke Petrignani; Alessandra Candian; Cameron J. Mackie; Xinchuan Huang; Timothy J. Lee; A. G. G. M. Tielens; Jos Oomens; Wybren Jan Buma
We report on an experimental and theoretical investigation of the importance of anharmonicity in the 3-μm CH stretching region of polycyclic aromatic hydrocarbon (PAH) molecules. We present mass-resolved, high-resolution spectra of the gas-phase cold (~4 K) linear PAH molecules naphthalene, anthracene, and tetracene. The measured IR spectra show a surprisingly high number of strong vibrational bands. For naphthalene, the observed bands are well separated and limited by the rotational contour, revealing the band symmetries. Comparisons are made to the harmonic and anharmonic approaches of the widely used Gaussian software. We also present calculated spectra of these acenes using the computational program SPECTRO, providing anharmonic predictions with a Fermi-resonance treatment that utilizes intensity redistribution. We demonstrate that the anharmonicity of the investigated acenes is strong, dominated by Fermi resonances between the fundamental and double combination modes, with triple combination bands as possible candidates to resolve remaining discrepancies. The anharmonic spectra as calculated with SPECTRO lead to predictions of the main bands that fall within 0.5% of the experimental frequencies. The implications for the aromatic infrared bands, specifically the 3-μm band, are discussed.
Journal of Chemical Physics | 2015
Cameron J. Mackie; Alessandra Candian; Xinchuan Huang; Timothy J. Lee; A. G. G. M. Tielens
A full derivation of the analytic transformation of the quadratic, cubic, and quartic force constants from normal coordinates to Cartesian coordinates is given. Previous attempts at this transformation have resulted in non-linear transformations; however, for the first time, a simple linear transformation is presented here. Two different approaches have been formulated and implemented, one of which does not require prior knowledge of the translation-rotation eigenvectors from diagonalization of the Hessian matrix. The validity of this method is tested using two molecules H2O and c-C3H2D(+).
Journal of Chemical Physics | 2016
Cameron J. Mackie; Alessandra Candian; Xinchuan Huang; Elena Maltseva; Annemieke Petrignani; Jos Oomens; Andrew Mattioda; Wybren Jan Buma; Timothy J. Lee; A. G. G. M. Tielens
The study of interstellar polycyclic aromatic hydrocarbons (PAHs) relies heavily on theoretically predicted infrared spectra. Most earlier studies use scaled harmonic frequencies for band positions and the double harmonic approximation for intensities. However, recent high-resolution gas-phase experimental spectroscopic studies have shown that the harmonic approximation is not sufficient to reproduce experimental results. In our previous work, we presented the anharmonic theoretical spectra of three linear PAHs, showing the importance of including anharmonicities into the theoretical calculations. In this paper, we continue this work by extending the study to include five non-linear PAHs (benz[a]anthracene, chrysene, phenanthrene, pyrene, and triphenylene), thereby allowing us to make a full assessment of how edge structure, symmetry, and size influence the effects of anharmonicities. The theoretical anharmonic spectra are compared to spectra obtained under matrix isolation low-temperature conditions, low-resolution, high-temperature gas-phase conditions, and high-resolution, low-temperature gas-phase conditions. Overall, excellent agreement is observed between the theoretical and experimental spectra although the experimental spectra show subtle but significant differences.
The Astrophysical Journal | 2016
Elena Maltseva; Annemieke Petrignani; Alessandra Candian; Cameron J. Mackie; Xinchuan Huang; Timothy J. Lee; A. G. G. M. Tielens; Jos Oomens; Wybren Jan Buma
In this work we report on high-resolution IR absorption studies that provide a detailed view on how the peripheral structure of irregular polycyclic aromatic hydrocarbons (PAHs) affects the shape and position of their 3 μ m absorption band. For this purpose, we present mass-selected, high-resolution absorption spectra of cold and isolated phenanthrene, pyrene, benz[a]antracene, chrysene, triphenylene, and perylene molecules in the 2950–3150 cm −1 range. The experimental spectra are compared with standard harmonic calculations and anharmonic calculations using a modified version of the SPECTRO program that incorporates a Fermi resonance treatment utilizing intensity redistribution. We show that the 3 μ m region is dominated by the effects of anharmonicity, resulting in many more bands than would have been expected in a purely harmonic approximation. Importantly, we find that anharmonic spectra as calculated by SPECTRO are in good agreement with the experimental spectra. Together with previously reported high-resolution spectra of linear acenes, the present spectra provide us with an extensive data set of spectra of PAHs with a varying number of aromatic rings, with geometries that range from open to highly condensed structures, and featuring CH groups in all possible edge configurations. We discuss the astrophysical implications of the comparison of these spectra on the interpretation of the appearance of the aromatic infrared 3 μ m band, and on features such as the two-component emission character of this band and the 3 μ m emission plateau.
Journal of Chemical Physics | 2018
Cameron J. Mackie; Tao Chen; Alessandra Candian; Timothy J. Lee; A. G. G. M. Tielens
The infrared (IR) emission of polycyclic aromatic hydrocarbons (PAHs) permeates our universe; astronomers have detected the IR signatures of PAHs around many interstellar objects. The IR emission of interstellar PAHs differs from their emission as seen under conditions on Earth as they emit through a collisionless cascade down through their excited vibrational states from high internal energies. The difficulty in reproducing interstellar conditions in the laboratory results in a reliance on theoretical techniques. However, the size and complexity of PAHs require careful consideration when producing the theoretical spectra. In this work, we outline the theoretical methods necessary to lead to fully theoretical IR cascade spectra of PAHs including: an anharmonic second order vibrational perturbation theory treatment, the inclusion of Fermi resonances through polyads, and the calculation of anharmonic temperature band shifts and broadenings (including resonances) through a Wang-Landau approach. We also suggest a simplified scheme to calculate vibrational emission spectra that retain the essential characteristics of the full IR cascade treatment and can directly transform low temperature absorption spectra in IR cascade spectra. Additionally we show that past astronomical models were in error in assuming a 15 cm-1 correction was needed to account for anharmonic emission effects.
Astronomy and Astrophysics | 2018
Elena Maltseva; Cameron J. Mackie; Alessandra Candian; Annemieke Petrignani; Xinchuan Huang; Timothy J. Lee; A. G. G. M. Tielens; Jos Oomens; Wybren Jan Buma
Aim. We aim to elucidate the spectral changes in the 3 μ m region that result from chemical changes in the molecular periphery of polycyclic aromatic hydrocarbons (PAHs) with extra hydrogens (H-PAHs) and methyl groups (Me-PAHs). Methods. Advanced laser spectroscopic techniques combined with mass spectrometry were applied on supersonically cooled 1,2,3,4-tetrahydronaphthalene, 9,10-dihydroanthracene, 9,10-dihydrophenanthrene, 1,2,3,6,7,8-hexahydropyrene, 9-methylanthracene, and 9,10-dimethylanthracene, allowing us to record mass-selective and conformationally selective absorption spectra of the aromatic, aliphatic, and alkyl CH-stretches in the 3.175 − 3.636 µ m region with laser-limited resolution. We compared the experimental absorption spectra with standard harmonic calculations and with second-order vibrational perturbation theory anharmonic calculations that use the SPECTRO program for treating resonances. Results. We show that anharmonicity plays an important if not dominant role, affecting not only aromatic, but also aliphatic and alkyl CH-stretch vibrations. The experimental high-resolution data lead to the conclusion that the variation in Me- and H-PAHs composition might well account for the observed variations in the 3 μ m emission spectra of carbon-rich and star-forming regions. Our laboratory studies also suggest that heavily hydrogenated PAHs form a significant fraction of the carriers of IR emission in regions in which an anomalously strong 3 μ m plateau is observed.
Astronomy and Astrophysics | 2018
Tao Chen; Cameron J. Mackie; Alessandra Candian; Timothy J. Lee; A. G. G. M. Tielens
Aims. Infrared (IR) spectroscopy is a powerful tool to study molecules in space. A key issue in such analyses is understanding the effect that temperature and anharmonicity have on different vibrat ...
The Astrophysical Journal | 2016
Elena Maltseva; Annemieke Petrignani; Alessandra Candian; Cameron J. Mackie; Xinchuan Huang; Timothy J. Lee; A. G. G. M. Tielens; Jos Oomens; Wybren Jan Buma
Elena Maltseva, Annemieke Petrignani, Alessandra Candian, Cameron J. Mackie, Xinchuan Huang, Timothy J. Lee, Alexander G. G. M. Tielens, Jos Oomens, and Wybren Jan Buma 1 University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands; [email protected] 2 Leiden Observatory, Niels Bohrweg 2, 2333 CA Leiden, The Netherlands; [email protected] 3 Radboud University, Toernooiveld 7, 6525 ED Nijmegen, The Netherlands 4 SETI Institute, 189 Bernardo Avenue, Suite 100, Mountain View, CA 94043, USA 5 NASA Ames Research Center, Moffett Field, CA 94035-1000, USA Received 2016 February 4; accepted 2016 February 16; published 2016 March 21
Proceedings of the International Astronomical Union | 2016
Tao Chen; Cameron J. Mackie; A. G. G. M. Tielens
In this work, we utilize a method based on Wang-Landau Monte Carlo sampling for studying the temperature effects of astrophysically relavant molecules. Anharmonic effects, e.g., resonances, overtones, and combination bands, are fully incoportated in this method. The calculated infrared (IR) spectra are consistent with the experimental data measured by National Institute of Standards and Technology (NIST).