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Dive into the research topics where David P. Hoogerheide is active.

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Featured researches published by David P. Hoogerheide.


Journal of Biological Chemistry | 2015

α-Synuclein Shows High Affinity Interaction with Voltage-dependent Anion Channel, Suggesting Mechanisms of Mitochondrial Regulation and Toxicity in Parkinson Disease

Tatiana K. Rostovtseva; Philip A. Gurnev; Olga Protchenko; David P. Hoogerheide; Thai Leong Yap; Caroline C. Philpott; Jennifer C. Lee; Sergey M. Bezrukov

Background: The intrinsically disordered protein α-synuclein, a hallmark of Parkinson disease, is involved in mitochondrial dysfunction in neurodegeneration and directly interacts with mitochondria. Results: α-Synuclein regulates VDAC permeability; α-synuclein toxicity in yeast depends on VDAC. Conclusion: α-Synuclein both blocks VDAC and translocates via this channel across the mitochondrial outer membrane. Significance: (Patho)physiological roles of monomeric α-synuclein may originate from its interaction with VDAC. Participation of the small, intrinsically disordered protein α-synuclein (α-syn) in Parkinson disease (PD) pathogenesis has been well documented. Although recent research demonstrates the involvement of α-syn in mitochondrial dysfunction in neurodegeneration and suggests direct interaction of α-syn with mitochondria, the molecular mechanism(s) of α-syn toxicity and its effect on neuronal mitochondria remain vague. Here we report that at nanomolar concentrations, α-syn reversibly blocks the voltage-dependent anion channel (VDAC), the major channel of the mitochondrial outer membrane that controls most of the metabolite fluxes in and out of the mitochondria. Detailed analysis of the blockage kinetics of VDAC reconstituted into planar lipid membranes suggests that α-syn is able to translocate through the channel and thus target complexes of the mitochondrial respiratory chain in the inner mitochondrial membrane. Supporting our in vitro experiments, a yeast model of PD shows that α-syn toxicity in yeast depends on VDAC. The functional interactions between VDAC and α-syn, revealed by the present study, point toward the long sought after physiological and pathophysiological roles for monomeric α-syn in PD and in other α-synucleinopathies.


European Biophysics Journal | 2015

Conductance hysteresis in the voltage-dependent anion channel

Shay M. Rappaport; Oscar Teijido; David P. Hoogerheide; Tatiana K. Rostovtseva; Sergey M. Bezrukov

Hysteresis in the conductance of voltage-sensitive ion channels is observed when the transmembrane voltage is periodically varied with time. Although this phenomenon has been used in studies of gating of the voltage-dependent anion channel, VDAC, from the outer mitochondrial membrane for nearly four decades, full hysteresis curves have never been reported, because the focus was solely on the channel opening branches of the hysteresis loops. We studied the hysteretic response of a multichannel VDAC system to a triangular voltage ramp the frequency of which was varied over three orders of magnitude, from 0.5xa0mHz to 0.2xa0Hz. We found that in this wide frequency range the area encircled by the hysteresis curves changes by less than a factor of three, suggesting broad distribution of the characteristic times and strongly non-equilibrium behavior. At the same time, quasi-equilibrium two-state behavior is observed for hysteresis branches corresponding to VDAC opening. This enables calculation of the usual equilibrium gating parameters, gating charge and voltage of equipartitioning, which were found to be almost insensitive to the ramp frequency. To rationalize this peculiarity, we hypothesize that during voltage-induced closure and opening the system explores different regions of the complex free energy landscape, and, in the opening branch, follows quasi-equilibrium paths.


Biophysical Journal Biophysical Letter | 2018

Real-Time Nanopore-Based Recognition of Protein Translocation Success | NIST

David P. Hoogerheide; Philip A. Gurnev; Tatiana K. Rostovtseva; Sergey M. Bezrukov


Journal of the American Chemical Society | 2017

Structural Features and Lipid Binding Domain of Tubulin on Biomimetic Mitochondrial Membranes

David P. Hoogerheide; Sergei Y. Noskov; Daniel Jacobs; Lucie Bergdoll; Vitalii Silin; David L. Worcester; Jeff Abramson; Hirsh Nanda; Tatiana K. Rostovtseva; Sergey M. Bezrukov


Biophysical Journal | 2015

Alpha-Synuclein Blocks VDAC Suggesting Mechanism of Mitochondrial Regulation and Toxicity in Parkinson Disease

Philip A. Gurnev; Tatiana K. Rostovtseva; David P. Hoogerheide; Olga Protchenko; Thai Leong Yap; Jennifer C. Lee; Sergey M. Bezrukov


Biophysical Journal | 2015

Effect of Lipid Composition on the Affinity and Binding of Dimeric Tubulin to Membranes Studied using Surface Plasmon Resonance, Neutron Reflectivity, Electrophysiology, and AC Electrical Methods

David P. Hoogerheide; Oscar Teijido Hermida; Tatiana K. Rostovtseva; Sergey M. Bezrukov; Hirsh Nanda


Biophysical Journal | 2015

Probing the Motion of the Intrinsically Disordered Neuronal Protein Alpha-Synuclein through the VDAC Pore using a Single-Molecule Approach

David P. Hoogerheide; Philip A. Gurnev; Tatiana K. Rostovtseva; Sergey M. Bezrukov


Archive | 2014

Protein-Nucleic Acid Interactions III

David P. Hoogerheide; Jene A. Golovchenko; José Bustamante; Nick Yelle; Tabard-Cossa Vincent; Megan L. Hochstrasser; David W. Taylor; Prashant Bhat; Chantal K. Guegler; Jennifer A. Doudna


Biophysical Journal | 2014

Universal Behavior of DNA Escape, Drift, and Diffusion in Nanopores

David P. Hoogerheide; Jene Andrew Golovchenko


Biophysical Journal | 2014

Towards the Incorporation of Functional Ion Channel Proteins in Tethered Membranes

David P. Hoogerheide; Amit Vaish; Tatiana K. Rostovtseva; Adam Kuszak; Sergey M. Bezrukov; Susan Krueger; Hirsh Nanda

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Sergey M. Bezrukov

National Institutes of Health

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Philip A. Gurnev

National Institutes of Health

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Hirsh Nanda

National Institute of Standards and Technology

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Jennifer C. Lee

National Institutes of Health

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Olga Protchenko

National Institutes of Health

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Thai Leong Yap

National Institutes of Health

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Adam Kuszak

National Institutes of Health

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Amit Vaish

National Institute of Standards and Technology

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