Dong Rip Kim

Synthesis of cross-linked protein-metal hybrid nanoflowers and its application in repeated batch decolorization of synthetic dyes

Herein, we report the preparation of a cross-linked protein-metal hybrid nanoflower (NF) system for laccase immobilization. The immobilized laccase showed effective encapsulation yield and activity recovery of 78.1% and 204%, respectively. The catalytic efficiency (kcatVmax-1) of cross-linked NF (CL-NF) was 2.2-fold more than that of free laccase. The CL-NF also exhibited significantly higher stability towards pH and temperature changes. It exhibited excellent storage stability and tolerance towards solvents and inhibitors as compared with the free enzyme. After 10 cycles of reuses, the NF and CL-NF laccase showed 41.2% and 92.3% residual activity, respectively. The CL-NF showed high oxidation potential, 265% that of the free enzyme, towards phenolic compounds. The CL-NF laccase retained the residual decolorization efficiency of up to 84.6% for synthetic dyes under repeated batch conditions of 10 cycles. These results suggested that the preparation of CL-NF is an effective approach to enhance the enzymatic properties and has great potential in many industrial applications.

Facile Fabrication of Superomniphobic Polymer Hierarchical Structures for Directional Droplet Movement

We report a facile method for fabricating polymer hierarchical structures, which are the engineered, ratchet-like microscale structures with nanoscale dimples, for the directional movement of droplets. The fabricated polymer hierarchical structures with no surface modifier show hydrophobic, superhydrophobic, or omniphobic characteristics depending on their intrinsic polymer properties. Further treatment with a surface modifier endows the polymer surfaces with superomniphobicity. The fabricated polymer substrates with no surface modifier enable the movement of the water droplet along the designed track at almost no inclination of the substrate.

Genome-scale analysis of Acetobacterium bakii reveals the cold adaptation of psychrotolerant acetogens by post-transcriptional regulation

Acetogens synthesize acetyl-CoA via CO2 or CO fixation, producing organic compounds. Despite their ecological and industrial importance, their transcriptional and post-transcriptional regulation has not been systematically studied. With completion of the genome sequence of Acetobacterium bakii (4.28-Mb), we measured changes in the transcriptome of this psychrotolerant acetogen in response to temperature variations under autotrophic and heterotrophic growth conditions. Unexpectedly, acetogenesis genes were highly up-regulated at low temperatures under heterotrophic, as well as autotrophic, growth conditions. To mechanistically understand the transcriptional regulation of acetogenesis genes via changes in RNA secondary structures of 5-untranslated regions (5-UTR), the primary transcriptome was experimentally determined, and 1379 transcription start sites (TSS) and 1100 5-UTR were found. Interestingly, acetogenesis genes contained longer 5-UTR with lower RNA-folding free energy than other genes, revealing that the 5-UTRs control the RNA abundance of the acetogenesis genes under low temperature conditions. Our findings suggest that post-transcriptional regulation via RNA conformational changes of 5-UTRs is necessary for cold-adaptive acetogenesis.