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Dive into the research topics where Ian R. Bates is active.

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Featured researches published by Ian R. Bates.


Protein Science | 2003

Interaction of the 18.5-kD isoform of myelin basic protein with Ca2+-calmodulin: Effects of deimination assessed by intrinsic Trp fluorescence spectroscopy, dynamic light scattering, and circular dichroism

David S. Libich; Christopher M.D Hill; Ian R. Bates; F. Ross Hallett; Souzan Armstrong; Aleksander Siemiarczuk; George Harauz

The effects of deimination (conversion of arginyl to citrullinyl residues) of myelin basic protein (MBP) on its binding to calmodulin (CaM) have been examined. Four species of MBP were investigated: unmodified recombinant murine MBP (rmMBP‐Cit0), an engineered protein with six quasi‐citrullinyl (i.e., glutaminyl) residues per molecule (rmMBP‐qCit6), human component C1 (hMBP‐Cit0), and human component C8 (hMBP‐Cit6), both obtained from a patient with multiple sclerosis (MS). Both rmMBP‐Cit0 and hMBP‐Cit0 bound CaM in a Ca2+‐dependent manner and primarily in a 1:1 stoichiometry, which was verified by dynamic light scattering. Circular dichroic spectroscopy was unable to detect any changes in secondary structure in MBP upon CaM‐binding. Inherent Trp fluorescence spectroscopy and a single‐site binding model were used to determine the dissociation constants: Kd = 144 ± 76 nM for rmMBP‐Cit0, and Kd = 42 ± 15 nM for hMBP‐Cit0. For rmMBP‐qCit6 and hMBP‐Cit6, the changes in fluorescence were suggestive of a two‐site interaction, although the dissociation constants could not be accurately determined. These results can be explained by a local conformational change induced in MBP by deimination, exposing a second binding site with a weaker association with CaM, or by the existence of several conformers of deiminated MBP. Titration with the collisional quencher acrylamide, and steady‐state and lifetime measurements of the fluorescence at 340 nm, showed both dynamic and static components to the quenching, and differences between the unmodified and deiminated proteins that were also consistent with a local conformational change due to deimination.


Micron | 2003

Terminal deletion mutants of myelin basic protein: new insights into self-association and phospholipid interactions.

Christopher M.D Hill; Jeffery D Haines; Christine E Antler; Ian R. Bates; David S. Libich; George Harauz

The 18.5kDa isoform of myelin basic protein (MBP) has strong and probably specific interactions with phosphoinositides that are of interest regarding this proteins function, and in effecting its two-dimensional crystallization for structural determination. We have designed and constructed truncation mutants of recombinant 18.5kDa murine myelin basic protein (rmMBP) lacking either the N- or C-terminal third, i.e. rmMBPDeltaN and rmMBPDeltaC, respectively. Both variants rmMBPDeltaC and rmMBPDeltaN generally had a reduced ability to aggregate lipid vesicles, compared to the whole protein, especially at lower protein/lipid ratios. Lipid vesicle cosedimentation showed that both truncated variants exhibited altered binding with phosphatidylinositol (PI). Incubation of these proteins under monolayers comprising PI and a nickel-chelating lipid yielded crystalline arrays of rmMBPDeltaC (but not rmMBPDeltaN) in the absence of high salt or osmolytes, which are required for crystallization of whole protein. This result suggests that the C-terminal segment of MBP is a significant source of conformational heterogeneity, and its removal will facilitate future planar or three-dimensional crystallization attempts. Incubation of rmMBPDeltaN and rmMBPDeltaC under monolayers comprising phosphatidylinositol-4-phosphate and a nickel-chelating lipid yielded tubular structures of opposite chirality, suggesting a synergistic effect of both termini of MBP in organizing myelin lipids.


Molecular and Cellular Biochemistry | 2000

Analogous standard motifs in myelin basic protein and in MARCKS

George Harauz; Noboru Ishiyama; Ian R. Bates

Myelin basic protein (MBP) and myristoylated alanine-rich C-kinase substrate (MARCKS) are similar in terms of having extended conformations regulated by their environment (i.e., solubilised or lipid-associated), N-terminal modifications, a dual nature of interactions with lipids, binding to actin and Ca2+-calmodulin, and being substrates for different kinds of protein kinases. The further sequence similarities of segments of MBP with lipid effector regions of MARCKS, and numerous reports in the literature, support the thesis that some developmental isoform of MBP functions in signal transduction.


Chemistry and Physics of Lipids | 2002

The formation of helical tubular vesicles by binary monolayers containing a nickel-chelating lipid and phosphoinositides in the presence of basic polypeptides.

Noboru Ishiyama; Christopher M.D Hill; Ian R. Bates; George Harauz

Binary lipid monolayers consisting of equimolar proportions of a phosphoinositide and a nickel-chelating lipid formed helical tubular vesicular structures, which appeared to be induced and/or stabilized by myelin basic protein (MBP). Another basic polypeptide, poly-L-lysine, had a similar effect but not to as great a degree as MBP; the proteins thus appeared to act as polycations. Although, the nickel-chelating lipid is a synthetic product, other endogenous divalent cations such as Zn(2+), as well as phosphoinositides, are integral and dynamic components of the myelin sheath in vivo. There, comparable helical tubular structures might represent a means for sequestration of these lipids into domains of high local concentration, perhaps in regions where the membrane is greatly curved.


Micron | 2004

Myelin basic protein—diverse conformational states of an intrinsically unstructured protein and its roles in myelin assembly and multiple sclerosis

George Harauz; Noboru Ishiyama; Christopher M.D Hill; Ian R. Bates; David S. Libich; Christophe Farès


Biophysical Journal | 2006

Membrane lateral diffusion and capture of CFTR within transient confinement zones.

Ian R. Bates; Benedict Hebert; Yishan Luo; Jie Liao; Alexia I. Bachir; David L. Kolin; Paul W. Wiseman; John W. Hanrahan


Protein Expression and Purification | 2000

Characterization of a Recombinant Murine 18.5-kDa Myelin Basic Protein

Ian R. Bates; Philip Matharu; Noboru Ishiyama; Denis Rochon; D. Denise Wood; Eugenia Polverini; Mario A. Moscarello; Nick Viner; George Harauz


Journal of Biological Chemistry | 2003

Membrane-anchoring and Charge Effects in the Interaction of Myelin Basic Protein with Lipid Bilayers Studied by Site-directed Spin Labeling

Ian R. Bates; Joan M. Boggs; Jimmy B. Feix; George Harauz


Protein Expression and Purification | 2002

An Arg/Lys→Gln mutant of recombinant murine myelin basic protein as a mimic of the deiminated form implicated in multiple sclerosis

Ian R. Bates; David S. Libich; D. Denise Wood; Mario A. Moscarello; George Harauz


Journal of Structural Biology | 2001

The effects of deimination of myelin basic protein on structures formed by its interaction with phosphoinositide-containing lipid monolayers.

Noboru Ishiyama; Ian R. Bates; Christopher M.D Hill; D. Denise Wood; Philip Matharu; Nick Viner; Mario A. Moscarello; George Harauz

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Noboru Ishiyama

Princess Margaret Cancer Centre

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