Ivan Guryanov

Effect of the Charge State (z = −1, 0, +1) on the Nuclear Magnetic Resonance of Monodisperse Au25[S(CH2)2Ph]18z Clusters

Monodisperse Au(25)L(18)(0) (L = S(CH(2))(2)Ph) and [n-Oct(4)N(+)][Au(25)L(18)(-)] clusters were synthesized in tetrahydrofuran. An original strategy was then devised to oxidize them: in the presence of bis(pentafluorobenzoyl) peroxide, the neutral or the negatively charged clusters react as efficient electron donors in a dissociative electron-transfer (ET) process, in the former case yielding [Au(25)L(18)(+)][C(6)F(5)CO(2)(-)]. As opposed to other reported redox methods, this dissociative ET approach is irreversible, easily controllable, and clean, particularly for NMR purposes, as no hydrogen atoms are introduced. By using this approach, the -1, 0, and +1 charge states of Au(25)L(18) could be fully characterized by (1)H and (13)C NMR spectroscopy, using one- and two-dimensional techniques, in various solvents, and as a function of temperature. For all charge states, the NMR results and analysis nicely match recent structural findings about the presence of two different ligand populations in the capping monolayer, each resonance of the two ligand families displaying distinct NMR patterns. The radical nature of Au(25)L(18)(0) is particularly evident in the (1)H and (13)C NMR patterns of the inner ligands. The NMR behavior of radical Au(25)L(18)(0) was also simulated by DFT calculations, and the interplay between theory and experiments revealed a fundamental paramagnetic contribution coming from Fermi contact shifts. Interestingly, the NMR patterns of Au(25)L(18)(-) and Au(25)L(18)(+) were found to be quite similar, pointing to the latter cluster form as a diamagnetic species.

Microwave-Assisted Functionalization of Carbon Nanostructures in Ionic Liquids

The effect of microwave (MW) irradiation and ionic liquids (IL) on the cycloaddition of azomethine ylides to [60]fullerene has been investigated by screening the reaction protocol with regard to the IL medium composition, the applied MW power, and the simultaneous cooling of the system. [60]Fullerene conversion up to 98 % is achieved in 2-10 min, by using a 1:3 mixture of the IL 1-methyl-3-n-octyl imidazolium tetrafluoroborate ([omim]BF(4)) and o-dichlorobenzene, and an applied power as low as 12 W. The mono- versus poly-addition selectivity to [60]fullerene can be tuned as a function of fullerene concentration. The reaction scope includes aliphatic, aromatic, and fluorous-tagged (FT) derivatives. MW irradiation of IL-structured bucky gels is instrumental for the functionalization of single-walled carbon nanotubes (SWNTs), yielding group coverages of up to one functional group per 60 carbon atoms of the SWNT network. An improved performance is obtained in low viscosity bucky gels, in the order [bmim]BF(4)> [omim]BF(4)> [hvim]TF(2)N (bmim=1-methyl-3-n-butyl imidazolium; hvim=1-vinyl-3-n-hexadecyl imidazolium). With this protocol, the introduction of fluorous-tagged pyrrolidine moieties onto the SWNT surface (1/108 functional coverage) yields novel FT-CNS (carbon nanostructures) with high affinity for fluorinated phases.

Influence of Surface Structure on Single or Mixed Component Self-Assembled Monolayers via in Situ Spectroelectrochemical Fluorescence Imaging of the Complete Stereographic Triangle on a Single Crystal Au Bead Electrode

The use of a single crystal gold bead electrode is demonstrated for characterization of self-assembled monolayers (SAM)s formed on the bead surface expressing a complete set of face centered cubic (fcc) surface structures represented by a stereographic projection. Simultaneous analysis of many crystallographic orientations was accomplished through the use of an in situ fluorescence microscopic imaging technique coupled with electrochemical measurements. SAMs were prepared from different classes of molecules, which were modified with a fluorescent tag enabling characterization of the influence of electrical potential and a direct comparison of the influence of surface structure on SAMs adsorbed onto low index, vicinal and chiral surfaces. The assembly of alkylthiol, Aib peptide and DNA SAMs are studied as a function of the electrical potential of the interface revealing how the organization of these SAMs depend on the surface crystallographic orientation, all in one measurement. This approach allows for a simultaneous determination of SAMs assembled onto an electrode surface onto which the whole fcc stereographic triangle can be mapped, revealing the influence of intermolecular interactions as well as the atomic arrangement of the substrate. Moreover, this method enables study of the influence of the Au surface atom arrangement on SAMs that were created and analyzed, both under identical conditions, something that can be challenging for the typical studies of this kind using individual gold single crystal electrodes. Also demonstrated is the analysis of a SAM containing two components prepared using thiol exchange. The two component SAM shows remarkable differences in the surface coverage, which strongly depends on the surface crystallography enabling estimates of the thiol exchange energetics. In addition, these electrode surfaces enable studies of molecular adsorption onto the symmetry related chiral surfaces since more than one stereographic triangle can be imaged at the same time. The ability to observe a SAM modified surface that contains many complete fcc stereographic triangles will facilitate the study of the single and multicomponent SAMs, identifying interesting surfaces for further analysis.

Conformational effects on the electron-transfer efficiency in peptide foldamers based on alpha,alpha-disubstituted glycyl residues.

Peptide foldamers based on α,α‐disubstituted glycyl residues were synthesized and chemically characterized to investigate the effects of the electric field generated by a 310‐helix on the rate of intramolecular photoinduced electron‐transfer reactions. To this end, two new octapeptides having identical sequences were suitably side‐chain functionalized with the same electron‐transfer donor–acceptor pair, but inverting the position of the pair along the main chain. The electron‐transfer rate constants, measured by time‐resolved spectroscopy techniques (nanosecond transient absorption and time‐resolved fluorescence), indicated that, in the case of the 310‐helix, the electrostatic effect is significant, but smaller than that obtained for α‐helical peptides. This finding can be likely ascribed to the distortion of the H‐bond network with respect to the helical axis taking place in the former secondary structure. Overall, these results could have implications on electron‐transfer phenomena in model and biomembranes facilitated by peptaibiotics.

Effect of Orientation of the Peptide-Bridge Dipole Moment on the Properties of Fullerene−Peptide−Radical Systems

We synthesized two series of compounds in which a nitroxide radical and a fullerene C(60) moiety were kept separated by a 3(10)-helical peptide bridge containing two intramolecular C═O···H-N hydrogen bonds. The direction of the resulting molecular dipole moment could be reversed by switching the position of fullerene and nitroxide with respect to the peptide nitrogen and carbon termini. The resulting fullerene-peptide-radical systems were compared to the behaviors of otherwise identical peptides but lacking either C(60) or the free radical moiety. Electrochemical analysis and chemical nitroxide reduction experiments show that the dipole moment of the helix significantly affects the redox properties of both electroactive groups. Besides providing evidence of a folded helical conformation for the peptide bridge, IR and NMR results highlight a strong effect of peptide orientation on the spectral patterns, pointing to a specific interaction of one of the helical orientations with the C(60) moiety. Time-resolved EPR spectra show not only that for both systems triplet quenching by nitroxide induces spin polarization of the radical spin sublevels, but also that the coupling interaction can be either weak or strong depending on the orientation of the peptide dipole. As opposed to the concept of dyads, the molecules investigated are thus better described as fullerene-peptide-radical systems to stress the active role of the bridge as an important ingredient capable of tuning the systems physicochemical properties.

Metal-free, retro-cycloaddition of fulleropyrrolidines in ionic liquids under microwave irradiation

Quantitative cycloreversion of fulleropyrrolidines to [60]fullerene is achieved in ionic liquids within minutes under microwave irradiation without any further additives.

Receptor-ligand interactions: Advanced biomedical applications.

Receptor-ligand interactions (RLIs) are at the base of all biological events occurring in living cells. The understanding of interactions between complementary macromolecules in biological systems represents a high-priority research area in bionanotechnology to design the artificial systems mimicking natural processes. This review summarizes and analyzes RLIs in some cutting-edge biomedical fields, in particular, for the preparation of novel stationary phases to separate complex biological mixtures in medical diagnostics, for the design of ultrasensitive biosensors for identification of biomarkers of various diseases at early stages, as well as in the development of innovative biomaterials and approaches for regenerative medicine. All these biotechnological fields are closely related, because their success depends on a proper choice, combination and spatial disposition of the single components of ligand-receptor pairs on the surface of appropriately designed support.

A procedure for estimating the surface dipole potential of monolayers adsorbed on electrodes

The extrathermodynamic potential difference Δϕ across an electrified interface enclosed between a bulk metal M and a bulk aqueous phase does not depend on the content of the interface, at constant applied potential E. By equating at constant E the expression of Δϕ for an electrode coated by a self-assembled monolayer (SAM) to that for the corresponding bare electrode immersed in the aqueous solution of a nonspecifically adsorbed electrolyte, it is possible to estimate the surface dipole potential χSAM of the SAM. If the molecules of the SAM form a bond M–X with the metal M, this procedure requires an independent knowledge of the surface dipole potential χM–XSAM due to such a bond. The other way round, if the χSAM value is known by independent means, the procedure allows an estimate of χM–XSAM. The self-consistency of this procedure was tested with SAMs of ten different thiolated peptides covalently bound to a mercury electrode, where χSAM can be determined independently by expanding a mercury drop. The procedure was then applied to the estimate of the χSAM value of a peptide SAM on a polycrystalline gold electrode.

Innovative chemical synthesis and conformational hints on the lipopeptide liraglutide

Liraglutide is a new generation lipopeptide drug used for the treatment of type II diabetes. In this work, we describe new approaches for its preparation fully by chemical methods. The key step of these strategies is the synthesis in solution of the Lys/γ‐Glu building block, Fmoc‐Lys‐(Pal‐γ‐Glu‐OtBu)‐OH, in which Lys and Glu residues are linked through their side chains and γ‐Glu is Nα‐palmitoylated. This dipeptide derivative is then inserted into the peptide sequence on solid phase. As liraglutide is obtained with great purity and high yield, our approach can be particularly attractive for an industrial production. We also report here the results of a circular dichroism conformational analysis in a membrane mimetic environment that offers new insights into the mechanism of action of liraglutide. Copyright

Production of peptides as generic drugs: a patent landscape of octreotide

ABSTRACT Introduction: New low-cost strategies and enhancement of the already described methods to manufacture peptide molecules on an industrial scale are highly requested, particularly for peptides such as octreotide, which, along with goserelin and leuprolide, dominate the global peptide market. A number of patents related to the production of octreotide can be found, concerning both solution and solid-phase synthesis. Thus, there is a need to revise the existing synthetic approaches in order to organize them in a more comprehensible way. Area covered: The octreotide patent landscape could help improvement of the methods for manufacturing of octreotide in industrial scale, leading to the appearance of innovative approaches. Expert opinion: The pharmaceutical value of octreotide can be seen from its high market percentage among other peptide drugs. The complex chemical structure of octreotide represents the main challenge for its industrial production. Two synthetic steps are crucial in the preparation of octreotide: (i) threoninol attachment or on resin formation working in solid-phase and (ii) disulphide bond formation to achieve cyclic structure. Analysis of various patents filed to date allows us to see the trend in simplification of the synthetic approaches from the labor intensive syntheses in solution to the more versatile and rapid solid-phase methods.