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Dive into the research topics where J. F. de Boer is active.

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Featured researches published by J. F. de Boer.


Optics Express | 2004

In vivo high-resolution video-rate spectral-domain optical coherence tomography of the human retina and optic nerve

Nader Nassif; Barry Cense; Boris Hyle Park; Mark C. Pierce; Seok Hyun Yun; Brett E. Bouma; Guillermo J. Tearney; Teresa Chen; J. F. de Boer

An ultra-high-speed spectral-domain optical coherence tomography system (SD-OCT) was developed for imaging the human retina and optic nerve in vivo at a sustained depth profile (A-line) acquisition speed of 29 kHz. The axial resolution was 6 microm in tissue and the system had shot-noise-limited performance with a maximum sensitivity of 98.4 dB. 3-dimensional data sets were collected in 11 and 13 seconds for the macula and optic nerve head respectively and are presented to demonstrate the potential clinical applications of SD-OCT in ophthalmology. Additionally, a 3-D volume of the optic nerve head was constructed from the acquired data and the retinal vascular network was visualized.


Optics Express | 2004

Ultrahigh-resolution high-speed retinal imaging using spectral-domain optical coherence tomography

Barry Cense; Nader Nassif; Teresa C. Chen; Mark C. Pierce; Seok Hyun Yun; Boris Hyle Park; Brett E. Bouma; Guillermo J. Tearney; J. F. de Boer

We present the first ultrahigh-resolution optical coherence tomography (OCT) structural intensity images and movies of the human retina in vivo at 29.3 frames per second with 500 A-lines per frame. Data was acquired at a continuous rate of 29,300 spectra per second with a 98% duty cycle. Two consecutive spectra were coherently summed to improve sensitivity, resulting in an effective rate of 14,600 A-lines per second at an effective integration time of 68 micros. The turn-key source was a combination of two super luminescent diodes with a combined spectral width of more than 150 nm providing 4.5 mW of power. The spectrometer of the spectraldomain OCT (SD-OCT) setup was centered around 885 nm with a bandwidth of 145 nm. The effective bandwidth in the eye was limited to approximately 100 nm due to increased absorption of wavelengths above 920 nm in the vitreous. Comparing the performance of our ultrahighresolution SD-OCT system with a conventional high-resolution time domain OCT system, the A-line rate of the spectral-domain OCT system was 59 times higher at a 5.4 dB lower sensitivity. With use of a software based dispersion compensation scheme, coherence length broadening due to dispersion mismatch between sample and reference arms was minimized. The coherence length measured from a mirror in air was equal to 4.0 microm (n= 1). The coherence length determined from the specular reflection of the foveal umbo in vivo in a healthy human eye was equal to 3.5 microm (n = 1.38). With this new system, two layers at the location of the retinal pigmented epithelium seem to be present, as well as small features in the inner and outer plexiform layers, which are believed to be small blood vessels. ?2004 Optical Society of America.


Optics Express | 2004

Motion artifacts in optical coherence tomography with frequency-domain ranging

Seok Hyun Yun; Guillermo J. Tearney; J. F. de Boer; Brett E. Bouma

We describe results of theoretical and experimental investigations of artifacts that can arise in spectral-domain optical coherence tomography (SD-OCT) and optical frequency domain imaging (OFDI) as a result of sample or probe beam motion. While SD-OCT and OFDI are based on similar spectral interferometric principles, the specifics of motion effects are quite different because of distinct signal acquisition methods. These results provide an understanding of motion artifacts such as signal fading, spatial distortion and blurring, and emphasize the need for fast image acquisition in biomedical applications.


Optics Express | 2005

Phase-resolved optical frequency domain imaging.

Benjamin J. Vakoc; Seok Hyun Yun; J. F. de Boer; Guillermo J. Tearney; Brett E. Bouma

Phase-resolved Doppler optical coherence tomography has been used to image blood flow dynamics in various tissues using both time-domain and spectral-domain optical coherence tomography techniques. In this manuscript, we present phase-resolved Doppler imaging with a high-speed optical frequency domain imaging system. We demonstrate that by correcting for spurious timing-induced phase errors, excellent flow sensitivity can be achieved, limited only by the imaging signal-to-noise ratio. Conventional and Doppler images showing flow in an Intralipid phantom and in human skin are presented. Additionally, we demonstrate the ability of phase-resolved OFDI to measure high flow rates without the deleterious effects of fringe washout.


Optics Express | 2004

Removing the depth-degeneracy in optical frequency domain imaging with frequency shifting

Seok Hyun Yun; Guillermo J. Tearney; J. F. de Boer; Brett E. Bouma

A novel technique using an acousto-optic frequency shifter in optical frequency domain imaging (OFDI) is presented. The frequency shift eliminates the ambiguity between positive and negative differential delays, effectively doubling the interferometric ranging depth while avoiding image cross-talk. A signal processing algorithm is demonstrated to accommodate nonlinearity in the tuning slope of the wavelength-swept OFDI laser source.


IEEE Photonics Technology Letters | 2004

Extended-cavity semiconductor wavelength-swept laser for biomedical imaging

Seok Hyun Yun; Caroline Boudoux; Mark C. Pierce; J. F. de Boer; Guillermo J. Tearney; Brett E. Bouma

We demonstrate a compact high-power rapidly swept wavelength tunable laser source based on a semiconductor optical amplifier and an extended-cavity grating filter. The laser produces excellent output characteristics for biomedical imaging, exhibiting >4-mW average output power, <0.06-nm instantaneous linewidth, and >80-dB noise extinction with its center wavelength swept over 100 nm at 1310 nm at variable repetition rates up to 500 Hz.


Optics Express | 2008

High-speed polarization sensitive optical frequency domain imaging with frequency multiplexing

Wang-Yuhl Oh; Seok Hyun Yun; Benjamin J. Vakoc; Milen Shishkov; Adrien E. Desjardins; Boris Hyle Park; J. F. de Boer; Guillermo J. Tearney; E. Bouma

Polarization sensitive optical coherence tomography (PS-OCT) provides a cross-sectional image of birefringence in biological samples that is complementary in many applications to the standard reflectance-based image. Recent ex vivo studies have demonstrated that birefringence mapping enables the characterization of collagen and smooth muscle concentration and distribution in vascular tissues. Instruments capable of applying these measurements percutaneously in vivo may provide new insights into coronary atherosclerosis and acute myocardial infarction. We have developed a polarization sensitive optical frequency domain imaging (PS-OFDI) system that enables high-speed intravascular birefringence imaging through a fiber-optic catheter. The novel design of this system utilizes frequency multiplexing to simultaneously measure reflectance of two incident polarization states, overcoming concerns regarding temporal variations of the catheter fiber birefringence and spatial variations in the birefringence of the sample. We demonstrate circular cross-sectional birefringence imaging of a human coronary artery ex vivo through a flexible fiber-optic catheter with an A-line rate of 62 kHz and a ranging depth of 6.2 mm.


Optics Express | 2004

Pulsed-source and swept-source spectral-domain optical coherence tomography with reduced motion artifacts

Seok Hyun Yun; Guillermo J. Tearney; J. F. de Boer; Brett E. Bouma

Significant motion artifacts may arise in conventional spectral-domain optical coherence tomography due to sample or probe motion during the exposure time of a CCD array. We show, for the first time to our knowledge, that the motion artifacts can be greatly reduced by short illumination of individual CCD pixels and that this can be accomplished by use of two distinct classes of light sources: broadband pulsed sources and cw wavelength-swept sources. We experimentally demonstrate the benefit of these techniques in terms of the reduction of signal fading due to an axially moving sample and fiber-optic catheter at a high rotational speed.


Journal of Glaucoma | 2013

Analysis of normal retinal nerve fiber layer thickness by age, sex, and race using spectral domain optical coherence tomography.

Tarek Alasil; Kathy S. Wang; P.A. Keane; Hang Lee; Neda Baniasadi; J. F. de Boer; Teresa C. Chen

Purpose:To determine the effects of age, sex, and race on the retinal nerve fiber layer (RNFL) in the normal human eye as measured by the spectral domain optical coherence tomography (SD-OCT) Spectralis machine (Heidelberg Engineering). Methods:Peripapillary SD-OCT RNFL thickness measurements were determined in normal subjects seen at a university-based clinic. One randomly selected eye per subject was used for analysis in this cross-sectional study. Multiple regression analysis was applied to assess the effects of age, sex, ethnicity, and mean refractive error on peripapillary RNFL thickness. Results are expressed as means±SD wherever applicable. Results:The study population consisted of 190 healthy participants from 9 to 86 years of age. Of the 190 participants, 62 (33%) were men, 125 (66%) Caucasians, 26 (14%) African Americans, 14 (7%) Hispanics, 16 (8%) Asians, and 9 (5%) other races. The mean RNFL thickness for the normal population studied was 97.3±9.6 µm. Normal RNFL thickness values follow the ISNT rule with decreasing RNFL thickness values starting from the thickest quadrant inferiorly to the thinnest quadrant temporally: inferior quadrant (126±15.8), superior quadrant (117.2±16.13), nasal quadrant (75±13.9), and temporal quadrant (70.6±10.8 µm). Thinner RNFL measurements were associated with older age (P<0.001); being Caucasian, versus being either Hispanic or Asian (P=0.02 and 0.009, respectively); or being more myopic (P<0.001). For every decade of increased age, mean RNFL thickness measured thinner by approximately 1.5 µm (95% confidence interval, 0.24-0.07). Comparisons between ethnic groups revealed that Caucasians had mean RNFL values (96±9.2 µm) slightly thinner than those of Hispanics (102.9±11 µm; P=0.02) or Asians (100.7±8.5 µm; P=0.009). African Americans RNFL values (99.2±10.2 µm) were not significantly different when compared with Caucasians. There was no relationship between RNFL thickness and sex. Conclusions:The thickest RNFL measurements were found in the inferior quadrant, followed by the superior, nasal, and temporal quadrants (ISNT rule applied to the RNFL). Thinner RNFL measurements were associated with older age and increasing myopia. Caucasians tend to have thinner RNFL values when compared with Hispanics and Asians. SD-OCT analysis of the normal RNFL showed results similar to time domain OCT studies.


Optics Express | 2004

Adaptive ranging for optical coherence tomography

Nicusor Iftimia; Brett E. Bouma; J. F. de Boer; Boris Hyle Park; Barry Cense; Guillermo J. Tearney

At present, optical coherence tomography systems have a limited imaging depth or axial scan range, making diagnosis of large diameter arterial vessels and hollow organs difficult. Adaptive ranging is a feedback technique where image data is utilized to adjust the coherence gate offset and range. In this paper, we demonstrate an adaptive optical coherence tomography system with a 7.0 mm range. By matching the imaging depth to the approximately 1.5 mm penetration depth in tissue, a 3 dB sensitivity improvement over conventional imaging systems with a 3.0 mm imaging depth was realized.

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Barry Cense

Indiana University Bloomington

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T.C. Chen

Massachusetts Eye and Ear Infirmary

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Teresa C. Chen

Massachusetts Eye and Ear Infirmary

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