Joern Dunkel
Massachusetts Institute of Technology
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Featured researches published by Joern Dunkel.
Philosophical Transactions of the Royal Society A | 2016
Peter Hänggi; Stefan Hilbert; Joern Dunkel
Depending on the exact experimental conditions, the thermodynamic properties of physical systems can be related to one or more thermostatistical ensembles. Here, we survey the notion of thermodynamic temperature in different statistical ensembles, focusing in particular on subtleties that arise when ensembles become non-equivalent. The ‘mother’ of all ensembles, the microcanonical ensemble, uses entropy and internal energy (the most fundamental, dynamically conserved quantity) to derive temperature as a secondary thermodynamic variable. Over the past century, some confusion has been caused by the fact that several competing microcanonical entropy definitions are used in the literature, most commonly the volume and surface entropies introduced by Gibbs. It can be proved, however, that only the volume entropy satisfies exactly the traditional form of the laws of thermodynamics for a broad class of physical systems, including all standard classical Hamiltonian systems, regardless of their size. This mathematically rigorous fact implies that negative ‘absolute’ temperatures and Carnot efficiencies more than 1 are not achievable within a standard thermodynamical framework. As an important offspring of microcanonical thermostatistics, we shall briefly consider the canonical ensemble and comment on the validity of the Boltzmann weight factor. We conclude by addressing open mathematical problems that arise for systems with discrete energy spectra.
arXiv: Fluid Dynamics | 2017
Jonasz Jozef Slomka; Joern Dunkel
We investigate flow pattern formation and viscosity reduction mechanisms in active fluids by studying a generalized Navier-Stokes model that captures the experimentally observed bulk vortex dynamics in microbial suspensions. We present exact analytical solutions including stress-free vortex lattices and introduce a computational framework that allows the efficient treatment of previously intractable higher-order shear boundary conditions. Large-scale parameter scans identify the conditions for spontaneous flow symmetry breaking, geometry-dependent viscosity reduction and negative-viscosity states amenable to energy harvesting in confined suspensions. The theory uses only generic assumptions about the symmetries and long-wavelength structure of active stress tensors, suggesting that inviscid phases may be achievable in a broad class of non-equilibrium fluids by tuning confinement geometry and pattern scale selection.
Proceedings of the National Academy of Sciences of the United States of America | 2017
Jonasz Jozef Slomka; Joern Dunkel
Significance Turbulence provides an important mechanism for energy redistribution and mixing in interstellar gases, planetary atmospheres, and the oceans. Classical turbulence theory suggests for ordinary 3D fluids or gases, such as water or air, that larger vortices can transform into smaller ones but not vice versa, thus limiting energy transfer from smaller to larger scales. Our calculations predict that bacterial suspensions and other pattern-forming active fluids can deviate from this paradigm by creating turbulent flow structures that spontaneously break mirror symmetry. These results imply that the collective dynamics of swimming microorganisms can enhance fluid mixing more strongly than previously thought. Classical turbulence theory assumes that energy transport in a 3D turbulent flow proceeds through a Richardson cascade whereby larger vortices successively decay into smaller ones. By contrast, an additional inverse cascade characterized by vortex growth exists in 2D fluids and gases, with profound implications for meteorological flows and fluid mixing. The possibility of a helicity-driven inverse cascade in 3D fluids had been rejected in the 1970s based on equilibrium-thermodynamic arguments. Recently, however, it was proposed that certain symmetry-breaking processes could potentially trigger a 3D inverse cascade, but no physical system exhibiting this phenomenon has been identified to date. Here, we present analytical and numerical evidence for the existence of an inverse energy cascade in an experimentally validated 3D active fluid model, describing microbial suspension flows that spontaneously break mirror symmetry. We show analytically that self-organized scale selection, a generic feature of many biological and engineered nonequilibrium fluids, can generate parity-violating Beltrami flows. Our simulations further demonstrate how active scale selection controls mirror-symmetry breaking and the emergence of a 3D inverse cascade.
Journal of Fluid Mechanics | 2018
Jonasz Jozef Slomka; Piotr Suwara; Joern Dunkel
Generalized Navier-Stokes (GNS) equations describing three-dimensional (3D) active fluids with flow-dependent spectral forcing have been shown to possess numerical solutions that can sustain significant energy transfer to larger scales by realising chiral Beltrami-type chaotic flows. To rationalise these findings, we study here the triad truncations of polynomial and Gaussian GNS models focusing on modes lying in the energy injection range. Identifying a previously unknown cubic invariant, we show that the asymptotic triad dynamics reduces to that of a forced rigid body coupled to a particle moving in a magnetic field. This analogy allows us to classify triadic interactions by their asymptotic stability: unstable triads correspond to rigid-body forcing along the largest and smallest principal axes, whereas stable triads arise from forcing along the middle axis. Analysis of the polynomial GNS model reveals that unstable triads induce exponential growth of energy and helicity, whereas stable triads develop a limit cycle of bounded energy and helicity. This suggests that the unstable triads dominate the initial relaxation stage of the full hydrodynamic equations, whereas the stable triads determine the statistically stationary state. To test this hypothesis, we introduce and investigate the Gaussian active turbulence model, which develops a Kolmogorov-type
Soft Matter | 2018
Norbert Stoop; Joern Dunkel
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Physical Review Letters | 2018
Daniel Lecoanet; Geoffrey M. Vasil; Oscar Mickelin; Jonasz Jozef Slomka; Keaton Burns; Luiz M. Faria; Joern Dunkel
energy spectrum at large wavelengths. Similar to the polynomial case, the steady-state chaotic flows spontaneously accumulate non-zero mean helicity while exhibiting Beltrami statistics and upward energy transport. Our results suggest that self-sustained Beltrami-type flows and an inverse energy cascade may be generic features of 3D active turbulence models with flow-dependent spectral forcing.
Bulletin of the American Physical Society | 2017
Anand Oza; Joern Dunkel
Topological defects shape the material and transport properties of physical systems. Examples range from vortex lines in quantum superfluids, defect-mediated buckling of graphene, and grain boundaries in ferromagnets and colloidal crystals, to domain structures formed in the early universe. The Kibble-Zurek (KZ) mechanism describes the topological defect formation in continuous non-equilibrium phase transitions with a constant finite quench rate. Universal KZ scaling laws have been verified experimentally and numerically for second-order transitions in planar Euclidean geometries, but their validity for discontinuous first-order transitions in curved and topologically nontrivial systems still poses an open question. Here, we use recent experimentally confirmed theory to investigate topological defect formation in curved elastic surface crystals formed by stress-quenching a bilayer material. Studying both spherical and toroidal crystals, we find that the defect densities follow KZ-type power laws independent of surface geometry and topology. Moreover, the nucleation sequences agree with recent experimental observations for spherical colloidal crystals. These results suggest that KZ scaling laws hold for a much broader class of dynamical phase transitions than previously thought, including non-thermal first-order transitions in non-planar geometries.
Bulletin of the American Physical Society | 2017
Norbert Stoop; Joern Dunkel
Recent experiments demonstrate the importance of substrate curvature for actively forced fluid dynamics. Yet, the covariant formulation and analysis of continuum models for nonequilibrium flows on curved surfaces still poses theoretical challenges. Here, we introduce and study a generalized covariant Navier-Stokes model for fluid flows driven by active stresses in nonplanar geometries. The analytical tractability of the theory is demonstrated through exact stationary solutions for the case of a spherical bubble geometry. Direct numerical simulations reveal a curvature-induced transition from a burst phase to an anomalous turbulent phase that differs distinctly from externally forced classical 2D Kolmogorov turbulence. This new type of active turbulence is characterized by the self-assembly of finite-size vortices into linked chains of antiferromagnetic order, which percolate through the entire fluid domain, forming an active dynamic network. The coherent motion of the vortex chain network provides an efficient mechanism for upward energy transfer from smaller to larger scales, presenting an alternative to the conventional energy cascade in classical 2D turbulence.
Physical Review Letters | 2016
Sebastian Heidenreich; Sabine H. L. Klapp; Markus Bär; Joern Dunkel
Bulletin of the American Physical Society | 2016
Norbert Stoop; Nicolas Waisbord; Vasily Kantsler; Jeffrey S. Guasto; Joern Dunkel