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Featured researches published by John Calambokidis.


The Journal of Experimental Biology | 2006

Kinematics of foraging dives and lunge-feeding in fin whales

Jeremy A. Goldbogen; John Calambokidis; Robert E. Shadwick; Erin M. Oleson; Mark A. McDonald; John A. Hildebrand

SUMMARY Fin whales are among the largest predators on earth, yet little is known about their foraging behavior at depth. These whales obtain their prey by lunge-feeding, an extraordinary biomechanical event where large amounts of water and prey are engulfed and filtered. This process entails a high energetic cost that effectively decreases dive duration and increases post-dive recovery time. To examine the body mechanics of fin whales during foraging dives we attached high-resolution digital tags, equipped with a hydrophone, a depth gauge and a dual-axis accelerometer, to the backs of surfacing fin whales in the Southern California Bight. Body pitch and roll were estimated by changes in static gravitational acceleration detected by orthogonal axes of the accelerometer, while higher frequency, smaller amplitude oscillations in the accelerometer signals were interpreted as bouts of active fluking. Instantaneous velocity of the whale was determined from the magnitude of turbulent flow noise measured by the hydrophone and confirmed by kinematic analysis. Fin whales employed gliding gaits during descent, executed a series of lunges at depth and ascended to the surface by steady fluking. Our examination of body kinematics at depth reveals variable lunge-feeding behavior in the context of distinct kinematic modes, which exhibit temporal coordination of rotational torques with translational accelerations. Maximum swimming speeds during lunges match previous estimates of the flow-induced pressure needed to completely expand the buccal cavity during feeding.


Biology Letters | 2007

Southern Hemisphere Humpback Whales Wintering Off Central America: Insights from Water Temperature into the Longest Mammalian Migration

Kristin Rasmussen; Daniel M. Palacios; John Calambokidis; Marco T. Saborío; Luciano Dalla Rosa; Eduardo R. Secchi; Gretchen H. Steiger; Judith Allen; Gregory S Stone

We report on a wintering area off the Pacific coast of Central America for humpback whales (Megaptera novaeangliae) migrating from feeding areas off Antarctica. We document seven individuals, including a mother/calf pair, that made this migration (approx. 8300 km), the longest movement undertaken by any mammal. Whales were observed as far north as 11° N off Costa Rica, in an area also used by a boreal population during the opposite winter season, resulting in unique spatial overlap between Northern and Southern Hemisphere populations. The occurrence of such a northerly wintering area is coincident with the development of an equatorial tongue of cold water in the eastern South Pacific, a pattern that is repeated in the eastern South Atlantic. A survey of location and water temperature at the wintering areas worldwide indicates that they are found in warm waters (21.1–28.3°C), irrespective of latitude. We contend that while availability of suitable reproductive habitat in the wintering areas is important at the fine scale, water temperature influences whale distribution at the basin scale. Calf development in warm water may lead to larger adult size and increased reproductive success, a strategy that supports the energy conservation hypothesis as a reason for migration.


Molecular Ecology | 1998

Population structure of nuclear and mitochondrial DNA variation among humpback whales in the North Pacific

C. S. Baker; Luis Medrano-González; John Calambokidis; A. Perry; F. Pichler; Howard C. Rosenbaum; Janice M. Straley; J. Urbán-Ramírez; Manami Yamaguchi; O. Von Ziegesar

The population structure of variation in a nuclear actin intron and the control region of mitochondrial DNA is described for humpback whales from eight regions in the North Pacific Ocean: central California, Baja Peninsula, nearshore Mexico (Bahia Banderas), offshore Mexico (Socorro Island), southeastern Alaska, central Alaska (Prince Williams Sound), Hawaii and Japan (Ogasawara Islands). Primary mtDNA haplotypes and intron alleles were identified using selected restriction fragment length polymorphisms of target sequences amplified by the polymerase chain reaction (PCR–RFLP). There was little evidence of heterogeneity in the frequencies of mtDNA haplotypes or actin intron alleles due to the year or sex composition of the sample. However, frequencies of four mtDNA haplotypes showed marked regional differences in their distributions (ΦST = 0.277; P < 0.001; n = 205 individuals) while the two alleles showed significant, but less marked, regional differences (ΦST = 0.033; P < 0.013; n = 400 chromosomes). An hierarchical analysis of variance in frequencies of haplotypes and alleles supported the grouping of six regions into a central and eastern stock with further partitioning of variance among regions within stocks for haplotypes but not for alleles. Based on available genetic and demographic evidence, the southeastern Alaska and central California feeding grounds were selected for additional analyses of nuclear differentiation using allelic variation at four microsatellite loci. All four loci showed significant differences in allele frequencies (overall FST = 0.043; P < 0.001; average n = 139 chromosomes per locus), indicating at least partial reproductive isolation between the two regions as well as the segregation of mtDNA lineages. Although the two feeding grounds were not panmictic for nuclear or mitochondrial loci, estimates of long‐term migration rates suggested that male‐mediated gene flow was several‐fold greater than female gene flow. These results include and extend the range and sample size of previously published work, providing additional evidence for the significance of genetic management units within oceanic populations of humpback whales.


The Journal of Experimental Biology | 2011

Mechanics, hydrodynamics and energetics of blue whale lunge feeding: efficiency dependence on krill density.

Jeremy A. Goldbogen; John Calambokidis; Erin M. Oleson; Jean Potvin; Nicholas D. Pyenson; Gregory S. Schorr; Robert E. Shadwick

SUMMARY Lunge feeding by rorqual whales (Balaenopteridae) is associated with a high energetic cost that decreases diving capacity, thereby limiting access to dense prey patches at depth. Despite this cost, rorquals exhibit high rates of lipid deposition and extremely large maximum body size. To address this paradox, we integrated kinematic data from digital tags with unsteady hydrodynamic models to estimate the energy budget for lunges and foraging dives of blue whales (Balaenoptera musculus), the largest rorqual and living mammal. Our analysis suggests that, despite the large amount of mechanical work required to lunge feed, a large amount of prey and, therefore, energy is obtained during engulfment. Furthermore, we suggest that foraging efficiency for blue whales is significantly higher than for other marine mammals by nearly an order of magnitude, but only if lunges target extremely high densities of krill. The high predicted efficiency is attributed to the enhanced engulfment capacity, rapid filter rate and low mass-specific metabolic rate associated with large body size in blue whales. These results highlight the importance of high prey density, regardless of prey patch depth, for efficient bulk filter feeding in baleen whales and may explain some diel changes in foraging behavior in rorqual whales.


Journal of Wildlife Management | 2003

Trends and status of harbor seals in Washington State: 1978-1999

Steven J. Jeffries; Harriet R. Huber; John Calambokidis; Jeffrey L. Laake

In the first half of the 20th century, harbor seal (Phoca vitulina richardsi) numbers were severely reduced in Washington state by a state-financed population control program. Seal numbers began to recover after the cessation of bounties in 1960 and passage of the Marine Mammal Protection Act (MMPA) in 1972. From 1978 to 1999, aerial surveys were flown at midday low tides during pupping season to determine the distribution and abundance of harbor seals in Washington. We used exponential and generalized logistic models to examine population trends and size relative to maximum net productivity level (MNPL) and carrying capacity (K). Observed harbor seal abundance has increased 3-fold since 1978, and estimated abundance has increased 7 to 10-fold since 1970. Under National Marine Fisheries Service (NMFS) management, Washington harbor seals are divided into 2 stocks: coastal and inland waters. The observed population size for 1999 is very close to the predicted Kfor both stocks. The current management philosophy for marine mammals that assumes a density-dependent response in population growth with MNPL > K/2 is supported by growth of harbor seal stocks in Washington waters.


Biology Letters | 2013

First direct measurements of behavioural responses by Cuvier's beaked whales to mid-frequency active sonar.

Stacy L. DeRuiter; Brandon L. Southall; John Calambokidis; Walter M. X. Zimmer; Dinara Sadykova; Erin A. Falcone; Ari S. Friedlaender; John E. Joseph; David Moretti; Gregory S. Schorr; Len Thomas; Peter L. Tyack

Most marine mammal strandings coincident with naval sonar exercises have involved Cuviers beaked whales (Ziphius cavirostris). We recorded animal movement and acoustic data on two tagged Ziphius and obtained the first direct measurements of behavioural responses of this species to mid-frequency active (MFA) sonar signals. Each recording included a 30-min playback (one 1.6-s simulated MFA sonar signal repeated every 25 s); one whale was also incidentally exposed to MFA sonar from distant naval exercises. Whales responded strongly to playbacks at low received levels (RLs; 89–127 dB re 1 µPa): after ceasing normal fluking and echolocation, they swam rapidly, silently away, extending both dive duration and subsequent non-foraging interval. Distant sonar exercises (78–106 dB re 1 µPa) did not elicit such responses, suggesting that context may moderate reactions. The observed responses to playback occurred at RLs well below current regulatory thresholds; equivalent responses to operational sonars could elevate stranding risk and reduce foraging efficiency.


Environmental Toxicology and Chemistry | 2004

Harbor seals (Phoca vitulina) in British Columbia, Canada, and Washington State, USA, reveal a combination of local and global polychlorinated biphenyl, dioxin, and furan signals

Peter S. Ross; Steven J. Jeffries; Mark B. Yunker; Richard F. Addison; Michael G. Ikonomou; John Calambokidis

The harbor seal (Phoca vitulina) can serve as a useful indicator of food web contamination by persistent organic pollutants (POPs) because of its high trophic level, wide distribution in temperate coastal waters of the Northern Hemisphere, and relative ease of capture. In 1996 through 1997, we live-captured 60 harbor seal pups from three regions, spanning remote (Queen Charlotte Strait, BC, Canada), moderately industrialized (Strait of Georgia, BC, Canada), and heavily industrialized (Puget Sound, WA, USA) marine basins straddling the Canada-United States border. Biopsy samples of blubber were taken and analyzed for congener-specific polychlorinated biphenyls (PCBs), polychlorinated dibenzo-p-dioxins (PCDDs), and polychlorinated dibenzofurans (PCDFs) by using high-resolution gas chromatography-high-resolution mass spectrometry. Harbor seals in Puget Sound were heavily contaminated with PCBs, whereas seals from the Strait of Georgia had relatively high concentrations of PCDDs and PCDFs. Pattern evaluation and principal components analysis suggested that proximity to sources influenced the mixture to which seals were exposed, with those inhabiting more remote areas being exposed to lighter PCB congeners (those with lower Henrys law constant and K(ow)) that disperse more readily through atmospheric and other processes. Total toxic equivalents to 2,3,7,8-tetrachlorodibenzo-p-dioxin for the PCBs, PCDDs, and PCDFs suggest that Puget Sound seals are at greatest risk for adverse health effects, and that PCBs represent the class of dioxinlike contaminants of greatest concern at all sites.


The Journal of Experimental Biology | 2008

Foraging behavior of humpback whales: kinematic and respiratory patterns suggest a high cost for a lunge

Jeremy A. Goldbogen; John Calambokidis; Donald A. Croll; James T. Harvey; Kelly M. Newton; Erin M. Oleson; Greg Schorr; Robert E. Shadwick

SUMMARY Lunge feeding in rorqual whales is a drag-based feeding mechanism that is thought to entail a high energetic cost and consequently limit the maximum dive time of these extraordinarily large predators. Although the kinematics of lunge feeding in fin whales supports this hypothesis, it is unclear whether respiratory compensation occurs as a consequence of lunge-feeding activity. We used high-resolution digital tags on foraging humpback whales (Megaptera novaengliae) to determine the number of lunges executed per dive as well as respiratory frequency between dives. Data from two whales are reported, which together performed 58 foraging dives and 451 lunges. During one study, we tracked one tagged whale for approximately 2 h and examined the spatial distribution of prey using a digital echosounder. These data were integrated with the dive profile to reveal that lunges are directed toward the upper boundary of dense krill aggregations. Foraging dives were characterized by a gliding descent, up to 15 lunges at depth, and an ascent powered by steady swimming. Longer dives were required to perform more lunges at depth and these extended apneas were followed by an increase in the number of breaths taken after a dive. Maximum dive durations during foraging were approximately half of those previously reported for singing (i.e. non-feeding) humpback whales. At the highest lunge frequencies (10 to 15 lunges per dive), respiratory rate was at least threefold higher than that of singing humpback whales that underwent a similar degree of apnea. These data suggest that the high energetic cost associated with lunge feeding in blue and fin whales also occurs in intermediate sized rorquals.


Journal of the Acoustical Society of America | 2001

The acoustic calls of blue whales off California with gender data

Mark A. McDonald; John Calambokidis; Arthur M. Teranishi; John A. Hildebrand

The acoustic calls of blue whales off California are described with visual observations of behavior and with acoustic tracking. Acoustic call data with corresponding position tracks are analyzed for five calling blue whales during one 100-min time period. Three of the five animals produced type A-B calls while two produced another call type which we refer to as type D. One of the animals producing the A-B call type was identified as male. Pauses in call production corresponded to visually observed breathing intervals. There was no apparent coordination between the calling whales. The average call source level was calculated to be 186 dB re: 1 muPa at 1 m over the 10-110-Hz band for the type B calls. On two separate days, female blue whales were observed to be silent during respective monitoring periods of 20 min and 1 h.


Conservation Biology | 2013

Assessing the Risk of Ships Striking Large Whales in Marine Spatial Planning

J. V. Redfern; Megan F. McKenna; T. J. Moore; John Calambokidis; Monica DeAngelis; Elizabeth A. Becker; Jay Barlow; Karin A. Forney; Paul C. Fiedler; Susan J. Chivers

Marine spatial planning provides a comprehensive framework for managing multiple uses of the marine environment and has the potential to minimize environmental impacts and reduce conflicts among users. Spatially explicit assessments of the risks to key marine species from human activities are a requirement of marine spatial planning. We assessed the risk of ships striking humpback (Megaptera novaeangliae), blue (Balaenoptera musculus), and fin (Balaenoptera physalus) whales in alternative shipping routes derived from patterns of shipping traffic off Southern California (U.S.A.). Specifically, we developed whale-habitat models and assumed ship-strike risk for the alternative shipping routes was proportional to the number of whales predicted by the models to occur within each route. This definition of risk assumes all ships travel within a single route. We also calculated risk assuming ships travel via multiple routes. We estimated the potential for conflict between shipping and other uses (military training and fishing) due to overlap with the routes. We also estimated the overlap between shipping routes and protected areas. The route with the lowest risk for humpback whales had the highest risk for fin whales and vice versa. Risk to both species may be ameliorated by creating a new route south of the northern Channel Islands and spreading traffic between this new route and the existing route in the Santa Barbara Channel. Creating a longer route may reduce the overlap between shipping and other uses by concentrating shipping traffic. Blue whales are distributed more evenly across our study area than humpback and fin whales; thus, risk could not be ameliorated by concentrating shipping traffic in any of the routes we considered. Reducing ship-strike risk for blue whales may be necessary because our estimate of the potential number of strikes suggests that they are likely to exceed allowable levels of anthropogenic impacts established under U.S. laws.

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Erin M. Oleson

National Oceanic and Atmospheric Administration

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Janice M. Straley

University of Alaska Southeast

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Jay Barlow

National Oceanic and Atmospheric Administration

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Annie B. Douglas

Washington University in St. Louis

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Alison K. Stimpert

Moss Landing Marine Laboratories

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