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Dive into the research topics where Joseph D. Holbrook is active.

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Featured researches published by Joseph D. Holbrook.


Weather, Climate, and Society | 2015

Indicators of Climate Change in Idaho: An Assessment Framework for Coupling Biophysical Change and Social Perceptiona

P. Zion Klos; John T. Abatzoglou; Alycia Bean; Jarod J. Blades; Melissa A. Clark; Megan Dodd; Troy E. Hall; Amanda Haruch; Philip E. Higuera; Joseph D. Holbrook; Vincent S. Jansen; Kerry B. Kemp; Amber Lankford; Timothy E. Link; Troy S. Magney; Arjan J. H. Meddens; Liza Mitchell; Brandon C. Moore; Penelope Morgan; Beth A. Newingham; Ryan J. Niemeyer; Ben Soderquist; Alexis A. Suazo; Kerri T. Vierling; Von P. Walden; Chelsea Walsh

AbstractClimate change is well documented at the global scale, but local and regional changes are not as well understood. Finer, local- to regional-scale information is needed for creating specific, place-based planning and adaption efforts. Here the development of an indicator-focused climate change assessment in Idaho is described. This interdisciplinary framework couples end users’ data needs with observed, biophysical changes at local to regional scales. An online statewide survey of natural resource professionals was conducted to assess the perceived impacts from climate change and determine the biophysical data needed to measure those impacts. Changes to water resources and wildfire risk were the highest areas of concern among resource professionals. Guided by the survey results, 15 biophysical indicator datasets were summarized that included direct climate metrics (e.g., air temperature) and indicators only partially influenced by climate (e.g., wildfire). Quantitative changes in indicators were de...


Ecology and Evolution | 2015

Occupancy of red-naped sapsuckers in a coniferous forest: Using LiDAR to understand effects of vegetation structure and disturbance

Joseph D. Holbrook; Kerri T. Vierling; Lee A. Vierling; Andrew T. Hudak; Patrick Adam

Abstract Red‐naped sapsuckers (Sphyrapicus nuchalis) are functionally important because they create sapwells and cavities that other species use for food and nesting. Red‐naped sapsucker ecology within aspen (Populus tremuloides) has been well studied, but relatively little is known about red‐naped sapsuckers in conifer forests. We used light detection and ranging (LiDAR) data to examine occupancy patterns of red‐naped sapsuckers in a conifer‐dominated system. We surveyed for sapsuckers at 162 sites in northern Idaho, USA, during 2009 and 2010. We used occupancy models and an information‐theoretic approach to model sapsucker occupancy as a function of four LiDAR‐based metrics that characterized vegetation structure and tree harvest, and one non‐LiDAR metric that characterized distance to major roads. We evaluated model support across a range of territory sizes using Akaikes information criterion. Top model support was highest at the 4‐ha extent, which suggested that 4 ha was the most relevant scale describing sapsucker occupancy. Sapsuckers were positively associated with variation of canopy height and harvested area, and negatively associated with shrub and large tree density. These results suggest that harvest regimes and structural diversity of vegetation at moderate extents (e.g., 4 ha) largely influence occurrence of red‐naped sapsuckers in conifer forests. Given the current and projected declines of aspen populations, it will be increasingly important to assess habitat relationships, as well as demographic characteristics, of aspen‐associated species such as red‐naped sapsuckers within conifer‐dominated systems to meet future management and conservation goals.


Ecology and Society | 2016

A social-ecological impact assessment for public lands management: application of a conceptual and methodological framework

Amanda L. Bentley Brymer; Joseph D. Holbrook; Ryan J. Niemeyer; Alexis A. Suazo; J. D. Wulfhorst; Kerri T. Vierling; Beth A. Newingham; Timothy E. Link; Janet L. Rachlow

According to the U.S. National Environmental Policy Act of 1969 (NEPA), federal action to manipulate habitat for species conservation requires an environmental impact statement, which should integrate natural, physical, economic, and social sciences in planning and decision making. Nonetheless, most impact assessments focus disproportionately on physical or ecological impacts rather than integrating ecological and socioeconomic components. We developed a participatory social-ecological impact assessment (SEIA) that addresses the requirements of NEPA and integrates social and ecological concepts for impact assessments. We cooperated with the Bureau of Land Management in Idaho, USA on a project designed to restore habitat for the Greater Sage-Grouse (Centrocercus urophasianus). We employed questionnaires, workshop dialogue, and participatory mapping exercises with stakeholders to identify potential environmental changes and subsequent impacts expected to result from the removal of western juniper (Juniperus occidentalis). Via questionnaires and workshop dialogue, stakeholders identified 46 environmental changes and associated positive or negative impacts to people and communities in Owyhee County, Idaho. Results of the participatory mapping exercises showed that the spatial distribution of social, economic, and ecological values throughout Owyhee County are highly associated with the two main watersheds, wilderness areas, and the historic town of Silver City. Altogether, the SEIA process revealed that perceptions of project scale varied among participants, highlighting the need for specificity about spatial and temporal scales. Overall, the SEIA generated substantial information concerning potential impacts associated with habitat treatments for Greater Sage-Grouse. The SEIA is transferable to other land management and conservation contexts because it supports holistic understanding and framing of connections between humans and ecosystems. By applying this SEIA framework, land managers and affected people have an opportunity to fulfill NEPA requirements and develop more comprehensive management plans that better reflect the linkages of social-ecological systems.


Western North American Naturalist | 2016

Ecosystem engineering of harvester ants: effects on vegetation in a sagebrush-steppe ecosystem

Elyce N. Gosselin; Joseph D. Holbrook; Katey Huggler; Emily Brown; Kerri T. Vierling; Robert S. Arkle; David S. Pilliod

Abstract. Harvester ants are influential in many ecosystems because they distribute and consume seeds, remove vegetation, and redistribute soil particles and nutrients. Understanding the interaction between harvester ants and plant communities is important for management and restoration efforts, particularly in systems altered by fire and invasive species such as the sagebrush-steppe. Our objective was to evaluate how vegetation cover changed as a function of distance from Owyhee harvester ant (Pogonomyrmex salinus) nests within a sagebrush-steppe ecosystem. We sampled 105 harvester ant nests within southern Idaho, USA, that occurred in different habitats: annual grassland, perennial grassland, and native shrubland. The influence of Owyhee harvester ants on vegetation was larger at the edge of ant nests, but the relationship was inconsistent among plant species. Percent cover was positively associated with distance from harvester ant nests for plant species that were considered undesirable food sources and were densely distributed. However, percent cover was negatively associated with distance-from-nests for patchily distributed and desirable plant species. For some plant species, there was no change in cover associated with distance-from-nests. Total vegetation cover was associated with distance-from-nests in the shrubland habitat but not in the 2 grasslands. The dominant plant species in the shrubland habitat was a densely distributed shrub (winterfat, Krascheninnikovia lanata) that was defoliated by harvester ants. Our results suggest that Owyhee harvester ants increase spatial heterogeneity in plant communities through plant clearing, but the direction and magnitude of effect will likely be contingent on the dominant vegetation groups. This information may inform future management and plant restoration efforts in sagebrush-steppe by directly considering the islands of influence associated with harvester ant engineering.


Rangeland Ecology & Management | 2016

Transition of Vegetation States Positively Affects Harvester Ants in the Great Basin, United States☆

Joseph D. Holbrook; David S. Pilliod; Robert S. Arkle; Janet L. Rachlow; Kerri T. Vierling; Michelle M. Wiest

ABSTRACT Invasions by non-native plants can alter ecosystems such that new ecological states are reached, but less is known about how these transitions influence animal populations. Sagebrush (Artemisia tridentata) ecosystems are experiencing state changes because of fire and invasion by exotic annual grasses. Our goal was to study the effects of these state changes on the Owyhee and western harvester ants (Pogonomyrmex salinus Olsen and P. occidentalis Cresson, respectively). We sampled 358 1-ha plots across the northern Great Basin,which captured unburned and burned conditions across 1-≥⃒31 years postfire. Our results indicated an immediate and consistent change in vegetation states fromshrubland to grassland between 1 and 31 years postfire. Harvester ant occupancy was unrelated to time since fire, whereas we observed a positive effect of fire on nest density. Similarly, we discovered that fire and invasion by exotic annuals were weak predictors of harvester ant occupancy but strong predictors of nest density. Occupancy of harvester ants wasmore likely in areas with finer-textured soils, low precipitation, abundant native forbs, and low shrub cover. Nest densitywas higher in arid locations that recently burned and exhibited abundant exotic annual and perennial (exotic and native) grasses. Finally,we discovered that burned areas that received postfire restoration had minimal influence on harvester ant occupancy or nest density compared with burned and untreated areas. These results suggest that fire-induced state changes from native shrublands to grasslands dominated by non-native grasses have a positive effect on density of harvester ants (but not occupancy), and that postfire restoration does not appear to positively or negatively affect harvester ants. Although wildfire and invasion by exotic annual grasses may negatively affect other species, harvester ants may indeed be one of the few winners among a myriad of losers linked to vegetation state changes within sagebrush ecosystems.


Oecologia | 2017

Examining spatial patterns of selection and use for an altered predator guild

Matthew A. Mumma; Joseph D. Holbrook; Nathaniel D. Rayl; Christopher J. Zieminski; Todd K. Fuller; John F. Organ; Shane P. Mahoney; Lisette P. Waits

Anthropogenic disturbances have altered species’ distributions potentially impacting interspecific interactions. Interference competition is when one species denies a competing species access to a resource. One mechanism of interference competition is aggression, which can result in altered space-use of a subordinate species due to the threat of harm, otherwise known as a ‘landscape of fear’. Alternatively, subordinates might outcompete dominant species in resource-poor environments via a superior ability to extract resources. Our goal was to evaluate spatial predictions of the ‘landscape of fear’ hypothesis for a carnivore guild in Newfoundland, Canada, where coyotes recently immigrated. Native Newfoundland carnivores include red foxes, Canada lynx, and black bears. We predicted foxes and lynx would avoid coyotes because of their larger size and similar dietary niches. We used scat-detecting dogs and genetic techniques to locate and identify predator scats. We then built resource selection functions and tested for avoidance by incorporating predicted values of selection for the alternative species into the best supported models of each species. We found multiple negative relationships, but notably did not find avoidance by foxes of areas selected by coyotes. While we did find that lynx avoided coyotes, we also found a reciprocal relationship. The observed patterns suggest spatial partitioning and not coyote avoidance, although avoidance could still be occurring at different spatial or temporal scales. Furthermore, Newfoundland’s harsh climate and poor soils may swing the pendulum of interspecific interactions from interference competition to exploitative competition, where subordinates outcompete dominant competitors through a superior ability to extract resources.


Ecography | 2014

A multi-method approach for analyzing hierarchical genetic structures: a case study with cougars Puma concolor

Niko Balkenhol; Joseph D. Holbrook; Dave Onorato; Peter Zager; Craig White; Lisette P. Waits


BioScience | 2016

A Pedagogical Model for Team-Based, Problem-Focused Interdisciplinary Doctoral Education

Nilsa A. Bosque-Pérez; P. Zion Klos; Jo Ellen Force; Lisette P. Waits; Kate Cleary; Paul Rhoades; Sara M. Galbraith; Amanda L. Bentley Brymer; Michael O’Rourke; Sanford D. Eigenbrode; Bryan Finegan; J.D. Wulfhorst; Nicole Sibelet; Joseph D. Holbrook


Remote Sensing of Environment | 2016

Airborne laser scanning and spectral remote sensing give a bird's eye perspective on arctic tundra breeding habitat at multiple spatial scales

Natalie T. Boelman; Joseph D. Holbrook; Heather E. Greaves; J.S. Krause; H.E. Chmura; Troy S. Magney; J.H. Perez; Jan U.H. Eitel; Laura Gough; Kerri T. Vierling; J.C. Wingfield; Lee A. Vierling


Ecosphere | 2016

Occupancy and abundance of predator and prey: implications of the fire‐cheatgrass cycle in sagebrush ecosystems

Joseph D. Holbrook; Robert S. Arkle; Janet L. Rachlow; Kerri T. Vierling; David S. Pilliod; Michelle M. Wiest

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David S. Pilliod

United States Geological Survey

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Robert S. Arkle

United States Geological Survey

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Amanda L. Bentley Brymer

Centro Agronómico Tropical de Investigación y Enseñanza

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