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Dive into the research topics where Kenneth F. Raffa is active.

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Featured researches published by Kenneth F. Raffa.


BioScience | 2008

Cross-scale Drivers of Natural Disturbances Prone to Anthropogenic Amplification: The Dynamics of Bark Beetle Eruptions

Kenneth F. Raffa; Brian H. Aukema; Barbara J. Bentz; Allan L. Carroll; Jeffrey A. Hicke; Monica G. Turner; William H. Romme

ABSTRACT Biome-scale disturbances by eruptive herbivores provide valuable insights into species interactions, ecosystem function, and impacts of global change. We present a conceptual framework using one system as a model, emphasizing interactions across levels of biological hierarchy and spatiotemporal scales. Bark beetles are major natural disturbance agents in western North American forests. However, recent bark beetle population eruptions have exceeded the frequencies, impacts, and ranges documented during the previous 125 years. Extensive host abundance and susceptibility, concentrated beetle density, favorable weather, optimal symbiotic associations, and escape from natural enemies must occur jointly for beetles to surpass a series of thresholds and exert widespread disturbance. Opposing feedbacks determine qualitatively distinct outcomes at junctures at the biochemical through landscape levels. Eruptions occur when key thresholds are surpassed, prior constraints cease to exert influence, and positive feedbacks amplify across scales. These dynamics are bidirectional, as landscape features influence how lower-scale processes are amplified or buffered. Climate change and reduced habitat heterogeneity increase the likelihood that key thresholds will be exceeded, and may cause fundamental regime shifts. Systems in which endogenous feedbacks can dominate after external forces foster the initial breach of thresholds appear particularly sensitive to anthropogenic perturbations.


Trends in Ecology and Evolution | 2011

The interdependence of mechanisms underlying climate-driven vegetation mortality

Nate G. McDowell; David J. Beerling; David D. Breshears; Rosie A. Fisher; Kenneth F. Raffa; Mark Stitt

Climate-driven vegetation mortality is occurring globally and is predicted to increase in the near future. The expected climate feedbacks of regional-scale mortality events have intensified the need to improve the simple mortality algorithms used for future predictions, but uncertainty regarding mortality processes precludes mechanistic modeling. By integrating new evidence from a wide range of fields, we conclude that hydraulic function and carbohydrate and defense metabolism have numerous potential failure points, and that these processes are strongly interdependent, both with each other and with destructive pathogen and insect populations. Crucially, most of these mechanisms and their interdependencies are likely to become amplified under a warmer, drier climate. Here, we outline the observations and experiments needed to test this interdependence and to improve simulations of this emergent global phenomenon.


Applied and Environmental Microbiology | 2004

Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods

Nichole A. Broderick; Kenneth F. Raffa; Robert M. Goodman; Jo Handelsman

ABSTRACT Little is known about bacteria associated with Lepidoptera, the large group of mostly phytophagous insects comprising the moths and butterflies. We inventoried the larval midgut bacteria of a polyphagous foliivore, the gypsy moth (Lymantria dispar L.), whose gut is highly alkaline, by using traditional culturing and culture-independent methods. We also examined the effects of diet on microbial composition. Analysis of individual third-instar larvae revealed a high degree of similarity of microbial composition among insects fed on the same diet. DNA sequence analysis indicated that most of the PCR-amplified 16S rRNA genes belong to the γ-Proteobacteria and low G+C gram-positive divisions and that the cultured members represented more than half of the phylotypes identified. Less frequently detected taxa included members of the α-Proteobacterium, Actinobacterium, and Cytophaga/Flexibacter/Bacteroides divisions. The 16S rRNA gene sequences from 7 of the 15 cultured organisms and 8 of the 9 sequences identified by PCR amplification diverged from previously reported bacterial sequences. The microbial composition of midguts differed substantially among larvae feeding on a sterilized artificial diet, aspen, larch, white oak, or willow. 16S rRNA analysis of cultured isolates indicated that an Enterococcus species and culture-independent analysis indicated that an Entbacter sp. were both present in all larvae, regardless of the feeding substrate; the sequences of these two phylotypes varied less than 1% among individual insects. These results provide the first comprehensive description of the microbial diversity of a lepidopteran midgut and demonstrate that the plant species in the diet influences the composition of the gut bacterial community.


Proceedings of the National Academy of Sciences of the United States of America | 2006

Midgut bacteria required for Bacillus thuringiensis insecticidal activity

Nichole A. Broderick; Kenneth F. Raffa; Jo Handelsman

Bacillus thuringiensis is the most widely applied biological insecticide and is used to manage insects that affect forestry and agriculture and transmit human and animal pathogens. This ubiquitous spore-forming bacterium kills insect larvae largely through the action of insecticidal crystal proteins and is commonly deployed as a direct bacterial spray. Moreover, plants engineered with the cry genes encoding the B. thuringiensis crystal proteins are the most widely cultivated transgenic crops. For decades, the mechanism of insect killing has been assumed to be toxin-mediated lysis of the gut epithelial cells, which leads to starvation, or B. thuringiensis septicemia. Here, we report that B. thuringiensis does not kill larvae of the gypsy moth in the absence of indigenous midgut bacteria. Elimination of the gut microbial community by oral administration of antibiotics abolished B. thuringiensis insecticidal activity, and reestablishment of an Enterobacter sp. that normally resides in the midgut microbial community restored B. thuringiensis-mediated killing. Escherichia coli engineered to produce the B. thuringiensis insecticidal toxin killed gypsy moth larvae irrespective of the presence of other bacteria in the midgut. However, when the engineered E. coli was heat-killed and then fed to the larvae, the larvae did not die in the absence of the indigenous midgut bacteria. E. coli and the Enterobacter sp. achieved high populations in hemolymph, in contrast to B. thuringiensis, which appeared to die in hemolymph. Our results demonstrate that B. thuringiensis-induced mortality depends on enteric bacteria.


Oecologia | 1995

Interaction of pre-attack and induced monoterpene concentrations in host conifer defense against bark beetle-fungal complexes

Kenneth F. Raffa; Eugene B. Smalley

Two pine species (Pinus resinosa, P. banksiana) responded to inoculation with fungi carried by bark beetles by rapidly increasing monoterpene concentrations at the entry site. Changes in total monoterpenes were more pronounced than changes in proportionate compositions. The extent and rate of host response was affected by fungal species, the viability of the inoculum, and host tree species. In general, host responses were highest to fungi that are phytopathogenic and consistently associated with the major bark beetles in the study region. Simple mechanical wounding cannot account for the observed allelochemical changes, as aseptic inoculations elicited only minor reactions. Similarly, inoculation with autoclaved inviable fungi generally elicited intermediate responses, suggesting that both structural and metabolic fungal properties are important. Responses by jack pine, P. banksiana, were generally more rapid and variable than those of red pine, P. resinosa. Dose-toxicity experiments with synthetic compounds demonstrated that monoterpene concentrations present in vivo only a few days after simulated attack are lethal to most beetles. Constitutive (pre-attack) monoterpene levels can also exert some toxicity. Because bark beetles engage in pheromone-mediated mass attacks that can deplete host defenses, constitutive monoterpene levels, while a necessary early phase of successful plant defense, appear insufficient by themselves. Such interactions between constitutive and induced defense chemistry may be important considerations when evaluating general theories of plant defense.


Science | 1986

Insecticide resistance: challenge to pest management and basic research.

L. B. Brattsten; C. W. Holyoke; J. R. Leeper; Kenneth F. Raffa

The agricultural use of synthetic insecticides usually protects crops but imposes strong selection pressures that can result in the development of resistance. The most important resistance mechanisms are enhancement of the capacity to metabolically detoxify insecticides and alterations in target sites that prevent insecticides from binding to them. Insect control methods must incorporate strategies to minimize resistance development and preserve the utility of the insecticides. The most promising approach, integrated pest management, includes the use of chemical insecticides in combination with improved cultural and biologically based techniques.


The American Naturalist | 1987

Interacting Selective Pressures in Conifer-Bark Beetle Systems: A Basis for Reciprocal Adaptations?

Kenneth F. Raffa; Alan A. Berryman

Conifer-bark beetle interactions provide a useful model system for evaluating potentially reciprocal selective pressures between plants and insects. The phloem-feeding bark beetles that infest living conifer stems are a major source of host mortality, and their successful reproduction is usually contingent on the death of the tree. Trees respond to invasion by producing a series of localized secretions and biochemical alterations that can contain the insect and associated microorganisms. We describe the relative advantages and disadvantages of two beetle reproductive strategies: overwhelming trees with a synchronized mass attack; and selecting weakened trees that cannot offer strong resistance. Differences in the defensive physiology of grand fir, Abies grandis (Douglas) Lindley, and lodgepole pine, Pinus contorta var. latifolia Engelmann, may be partially responsible for differences in the behavior of the fir engraver beetle, Scolytus ventralis LeConte, and the mountain pine beetle, Dendroctonus ponderosae Hopkins, respectively. Both tree species react to controlled inoculation with fungal symbionts of the beetle by producing monoterpenes and other defensive chemicals that may or may not be present in uninjured tissue. Grand fir, however, undergoes a more extensive series of biochemical conversions than does lodgepole pine. The relative extent of these responses appears to have resulted in different optimal behaviors by the two bark beetle species. Because they are not strongly repelled by host monoterpenes, mountain pine beetles enter trees that can be made suitable only by the arrival of additional colonizers. Fir engravers are repelled by cues associated with strong defensive capacity and orient solely to weakened trees. Their aggregation behavior is somewhat cooperative, but it also includes elements of social parasitism. Even though colonization by bark beetles usually leads to tree death, the effect on host fitness varies with age and ecological status. Because of factors affecting both resistance and substrate suitability, most trees are able to produce cones for several decades before attack. Where lodgepole pine is seral, there is probably little selection for resistance once late-successional species have grown into the understory. We examine the theory that a synchronous decline in resistance capacity among old trees in even-aged stands increases the likelihood of beetle epidemics and subsequent fires, thereby favoring reestablishment of lodgepole pine. Later-successional species, like grand fir, are apparently not favored by beetle outbreaks, and all age groups sampled seem physiologically capable of defending themselves against attack. We discuss the interactions between beetle and conifer traits and whether these can affect reproductive rates. We propose a model in which several feedback processes operating among groups of traits, rather than strictly deterministic pathways or single biochemical causes, structure the plant-insect interaction. Finally, we discuss the general implications to coevolutionary theory.


Annual Review of Microbiology | 2008

Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities

Ainslie E. F. Little; Courtney J. Robinson; S. Brook Peterson; Kenneth F. Raffa; Jo Handelsman

Microbial communities comprise an interwoven matrix of biological diversity modified by physical and chemical variation over space and time. Although these communities are the major drivers of biosphere processes, relatively little is known about their structure and function, and predictive modeling is limited by a dearth of comprehensive ecological principles that describe microbial community processes. Here we discuss working definitions of central ecological terms that have been used in various fashions in microbial ecology, provide a framework by focusing on different types of interactions within communities, review the status of the interface between evolutionary and ecological study, and highlight important similarities and differences between macro- and microbial ecology. We describe current approaches to study microbial ecology and progress toward predictive modeling.


Chemoecology | 2001

Mixed messages across multiple trophic levels: the ecology of bark beetle chemical communication systems*

Kenneth F. Raffa

Summary. Chemical, physiological and behavioral components of pheromone communication have been described for a number of bark beetle species, yet our understanding of how these signals function under natural conditions remains relatively limited. Development of ecologically based models is complicated by the multiple functions and sources of variability inherent in bark beetle semiochemistry. This discussion addresses four ecological issues of chemical signaling in bark beetles: the effects of aggregation on individual fitness, the possibility of cheating, how plants can defend themselves against herbivores that employ aggregation pheromones, and the implications of variability in chemical communication systems to predator avoidance. An analysis of published data from thirteen scolytid – conifer systems indicates that the net benefit and optimal colonization density vary with host condition and beetle species. When beetles attack live trees, the benefit of cooperative host procurement exceeds losses due to competition for the limited substrate, at least up to moderate densities. When beetles colonize dead tissue, however, the effect of subsequently arriving beetles on initial colonizers is almost entirely negative. This suggests that aggregation originated as exploitation of senders, but evolved into manipulation of receivers. It is also proposed that the optimal colonization density which typifies each species or population may offer a more objective and less value–laden index of behavior than current labels such as “aggressiveness”. Beetles can maximize the relative benefits of group attack by incorporating instantaneous measures of host resistance into their colonization behavior, and by adjusting oviposition with colonization density. This system may provide opportunities for cheating. However a number of factors may select against a fixed strategy of cheating, including the linkage between tree allelochemistry and beetle semiochemistry, the reduced quality of substrate available to late arrivers, the short adult lifespans of most bark beetles, differential exposure to some predators, the difficulty of locating signalers during extensive endemic periods, and the low costs incurred during host assessment. However, the possibility that beetles employ flexible, density – dependent strategies deserves heightened attention. The ability of bark beetles to collectively exhaust host defenses poses a particular problem for plant defense. It is argued here that the ideal defense should include both direct resistance mechanisms against invading beetles, and indirect mechanisms that inhibit chemical communication. Evidence for the latter mechanism is explored. The ability of predators to efficiently exploit aggregation pheromones as kairomones in prey finding poses significant risk to bark beetles. It is proposed that minor alterations in pheromone components may provide colonizers with partial escape from such natural enemies while maintaining intraspecific functionality. Traditional interpretations emphasized the fidelity and consistency of pheromones, but under natural conditions chemical signals are modified by unpredictable features of the biotic and abiotic environment. Although we typically view variation in pheromonal signals as experimental noise or simple deviations from a population norm, such variation may reflect evolutionary dynamics. Complex ecological interactions may impose trade-offs between the clarity versus diversity of their signals.


New Phytologist | 2015

Tree mortality from drought, insects, and their interactions in a changing climate

William R. L. Anderegg; Jeffrey A. Hicke; Rosie A. Fisher; Craig D. Allen; Juliann E. Aukema; Barbara J. Bentz; Sharon M. Hood; Jeremy W. Lichstein; Alison K. Macalady; Nate G. McDowell; Yude Pan; Kenneth F. Raffa; Anna Sala; John D. Shaw; Nathan L. Stephenson; Christina L. Tague; Melanie Zeppel

Climate change is expected to drive increased tree mortality through drought, heat stress, and insect attacks, with manifold impacts on forest ecosystems. Yet, climate-induced tree mortality and biotic disturbance agents are largely absent from process-based ecosystem models. Using data sets from the western USA and associated studies, we present a framework for determining the relative contribution of drought stress, insect attack, and their interactions, which is critical for modeling mortality in future climates. We outline a simple approach that identifies the mechanisms associated with two guilds of insects - bark beetles and defoliators - which are responsible for substantial tree mortality. We then discuss cross-biome patterns of insect-driven tree mortality and draw upon available evidence contrasting the prevalence of insect outbreaks in temperate and tropical regions. We conclude with an overview of tools and promising avenues to address major challenges. Ultimately, a multitrophic approach that captures tree physiology, insect populations, and tree-insect interactions will better inform projections of forest ecosystem responses to climate change.

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Kier D. Klepzig

United States Forest Service

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Charles J. Mason

Pennsylvania State University

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Cameron R. Currie

University of Wisconsin-Madison

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Aaron S. Adams

University of Wisconsin-Madison

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Richard L. Lindroth

University of Wisconsin-Madison

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