Kornélia Kurucz

Candidate new rotavirus species in Schreiber's bats, Serbia

Abstract The genus Rotavirus comprises eight species designated A to H and one tentative species, Rotavirus I. In a virus metagenomic analysis of Schreibers bats sampled in Serbia in 2014 we obtained sequences likely representing novel rotavirus species. Whole genome sequencing and phylogenetic analysis classified the representative strain into a tentative tenth rotavirus species, we provisionally called Rotavirus J. The novel virus shared a maximum of 50% amino acid sequence identity within the VP6 gene to currently known members of the genus. This study extends our understanding of the genetic diversity of rotaviruses in bats.

Molecular survey of RNA viruses in Hungarian bats: discovering novel astroviruses, coronaviruses, and caliciviruses.

UNLABELLED Background: Bat-borne viruses pose a potential risk to human health and are the focus of increasing scientific interest. To start gaining information about bat-transmitted viruses in Hungary, we tested multiple bat species for several virus groups between 2012 and 2013. MATERIALS AND METHODS Fecal samples were collected from bats across Hungary. We performed group-specific RT-PCR screening for astro-, calici-, corona-, lyssa-, othoreo-, paramyxo-, and rotaviruses. Positive samples were selected and sequenced for further phylogenetic analyses. RESULTS A total of 447 fecal samples, representing 24 European bat species were tested. Novel strains of astroviruses, coronaviruses, and caliciviruses were detected and analyzed phylogenetically. Out of the 447 tested samples, 40 (9%) bats were positive for at least one virus. Bat-transmitted astroviruses (BtAstV) were detected in eight species with a 6.93% detection rate (95% confidence interval [CI] 4.854, 9.571). Coronaviruses (BtCoV) were detected in seven bat species with a detection rate of 1.79% (95% CI 0.849, 3.348), whereas novel caliciviruses (BtCalV) were detected in three bat species with a detection rate of 0.67% (95% CI 0.189, 1.780). Phylogenetic analyses revealed a great diversity among astrovirus strains, whereas the Hungarian BtCoV strains clustered together with both alpha- and betacoronavirus strains from other European countries. One of the most intriguing findings of our investigation is the discovery of novel BtCalVs in Europe. The Hungarian BtCalV did not cluster with any of the calcivirus genera identified in the family so far. CONCLUSIONS We have successfully confirmed BtCoVs in numerous bat species. Furthermore, we have described new bat species harboring BtAstVs in Europe and found new species of CalVs. Further long-term investigations involving more species are needed in the Central European region for a better understanding on the host specificity, seasonality, phylogenetic relationships, and the possible zoonotic potential of these newly described viruses.

The former Iron Curtain still drives biodiversity-profit trade-offs in German agriculture

Agricultural intensification drives biodiversity loss and shapes farmers’ profit, but the role of legacy effects and detailed quantification of ecological–economic trade-offs are largely unknown. In Europe during the 1950s, the Eastern communist bloc switched to large-scale farming by forced collectivization of small farms, while the West kept small-scale private farming. Here we show that large-scale agriculture in East Germany reduced biodiversity, which has been maintained in West Germany due to >70% longer field edges than those in the East. In contrast, profit per farmland area in the East was 50% higher than that in the West, despite similar yield levels. In both regions, switching from conventional to organic farming increased biodiversity and halved yield levels, but doubled farmers’ profits. In conclusion, European Union policy should acknowledge the surprisingly high biodiversity benefits of small-scale agriculture, which are on a par with conversion to organic agriculture.East German collective farms reduced biodiversity but raised profits, in contrast to smaller private farms in West Germany, with legacy effects that continue today.

Genetic diversity and recombination within bufaviruses: Detection of a novel strain in Hungarian bats

Abstract Bats are important hosts of many viruses and in several cases they may serve as natural reservoirs even for viruses with zoonotic potential worldwide, including Europe. However, they also serve as natural reservoir for other virus groups with important evolutionary relevance and yet unknown zoonotic potential. We performed viral metagenomic analyses on Miniopterus schreibersii bat fecal samples. As a result, a novel parvovirus was detected for the first time in European bats. Although, bufavirus was recently discovered as a novel human infecting parvovirus, here we report sequence data of the first bufavirus from European bats related to human bufaviruses. Based on our sequence data a possible intragenic recombination event was detected within bufaviruses which may serves as an important milestone in their evolution.

Circulation of Dirofilaria repens, Setaria tundra, and Onchocercidae species in Hungary during the period 2011–2013

Dirofilaria repens and recently Dirofilaria immitis are known to be endemic in Hungary. Since there is no related research on Dirofilaria carrier mosquito species from Hungary, we conducted a three-year mosquito surveillance study between 2011 and 2013. During the study period we examined 23,139 female mosquitoes with a generic filaria-specific TaqMan PCR assay, and characterized them by sequencing a 500 bp segment of 12S rRNA. An important result of our study was the detection of Setaria tundra and D. repens along with an unidentified Onchocercidae nematode. D. repens is known to be endemic in Hungary, however, the detection of S. tundra in all sampling sites throughout the study period indicates for the first time the endemicity of this parasite in Hungary. The Onchocercidae sp. nematode showed 95% nucleotide identity with previously detected unidentified nematodes from Germany, indicating a broader geographical distribution of this nematode in Europe. D. immitis specific DNA was not detected among the screened mosquitoes in this study. Here we report 11 mosquito species as potential vector organisms for local filarial infections, including Aedes vexans, Ochlerotatus annulipes, Ochlerotatus sticticus, Coquillettidia richiardii, Anopheles hyrcanus and Ochlerotatus rusticus. Dirofilaria development unit was calculated and the potential transmission period was estimated, which ranged between 65 and 113 days between sampling seasons. A relatively high infection rate (36.8%) was identified, which is a notable finding for veterinary and human health professionals. Moreover, the results of our study widen the group of possible mosquito vector species for D. repens and S. tundra in Central Europe.

Genetic characterization of a novel picornavirus detected in miniopterus schreibersii bats

Bats are important reservoirs of many viruses with zoonotic potential worldwide, including Europe. Among bat viruses, members of the Picornaviridae family remain a neglected group. We performed viral metagenomic analyses on Miniopterus schreibersii bat faecal samples, collected in Hungary in 2013. In the present study we report the first molecular data and genomic characterization of a novel picornavirus from the bat species M. schreibersii in Europe. Based on phylogenetic analyses, the novel bat picornaviruses unambiguously belong to the Mischivirus genus and were highly divergent from other bat-derived picornaviruses of the Sapelovirus genus. Although the Hungarian viruses were most closely related to Mischivirus A, they formed a separate monophyletic branch within the genus.

Coating plasticine eggs can eliminate the overestimation of predation on artificial ground nests

Capsule The use of plasticine eggs coated with a thin layer of rubber instead of entirely plasticine eggs in dummy nests reduced the unnaturally high nest predation rate caused by attracted small mammals, while also enabling the identification of nest predators.

Emergence of Aedes koreicus (Diptera: Culicidae) in an urban area, Hungary, 2016

In June 2016, three adult females of Aedes koreicus mosquitoes were trapped in the urban area of Pécs, Southwest Hungary. The introduction of this invasive mosquito species in this region, along with the recent detection in Germany, may indicate the capability of the species to spread across Europe. Along with Aedes albopictus and Aedes japonicus mosquitoes, this is the third invasive mosquito species occurred in Hungary.

Ecosystem services and disservices provided by small rodents in arable fields: Effects of local and landscape management

In agriculture, both valuable ecosystem services and unwanted ecosystem disservices can be produced by the same organism group. For example, small rodents can provide biological control through weed seed consumption but may also act as pests, causing crop damage. We studied the hypothesized causal relationships between ecosystem services (removal of weed seeds) and disservices (removal of wheat grains and crop damage) derived by small rodents (voles and mice) at multiple spatial scales. At the landscape scale, we studied the effects of landscape compositional and configurational heterogeneity on the abundance of voles and mice and their related ecosystem services and disservices along the former inner German border in east and west Germany. At the local scale, we studied how abundance and ecosystem functions are affected by management intensity (organic vs. conventional winter wheat), associated differences in crop characteristics and edge effects. Linear mixed-effects models and path analysis show that voles drove ecosystem disservices, but not ecosystem services, in agricultural fields. Daily wheat seed removal by voles was influenced by increasing wheat height and was almost three times higher than weed seed removal, which was not related to local- or landscape-scale effects. Abundance of voles and associated crop damage decreased with lower crop density and higher wheat height, which were associated with organic farming. Abundance of voles and crop damage were highest in conventional fields in west Germany. Synthesis and applications. As the ecosystem disservice of wheat seed consumption by small rodents must be considered mainly during crop sowing, management before crop harvest should focus on decreasing the pest potential of voles but not mice. Our results suggest that densities of voles and their ecosystem disservices could be reduced by having fields with low crop density and high wheat height, practices associated with organic farming. Surrounding landscapes with low compositional and configurational heterogeneity could further reduce voles’ pest potential, but with probable negative effects on farmland biodiversity.

Non‐linearities in bird responses across urbanisation gradients: a meta‐analysis

Urbanization is one of the most extreme forms of environmental alteration, posing a major threat to biodiversity. We studied the effects of urbanization on avian communities via a systematic review using hierarchical and categorical meta-analyses. Altogether, we found 42 observations from 37 case studies for species richness and 23 observations from 20 case studies for abundance. Urbanization had an overall strong negative effect on bird species richness, whereas abundance increased marginally with urbanization. There was no evidence that city size played a role in influencing the relationship between urbanization and either species richness or abundance. Studies that examined long gradients (i.e. from urban to rural) were more likely to detect negative urbanization effects on species richness than studies that considered short gradients (i.e. urban vs. suburban or urban vs. rural areas). In contrast, we found little evidence that the effect of urbanization on abundance was influenced by gradient length. Effects of urbanization on species richness were more negative for studies including public green spaces (parks and other amenity areas) in the sampled landscapes. In contrast, studies performed solely in the urban matrix (i.e. no green spaces) revealed a strong positive effect on bird abundance. When performing subset analyses on urban-suburban, suburban-rural and suburban-natural comparisons, species richness decreased from natural to urban areas, but with a stronger decrease at the urban-suburban interface, whereas bird abundance showed a clear intermediate peak along the urban-rural gradient although abundance in natural areas was comparable to that in suburban areas. This suggests that species loss happens especially at the urban-suburban interface, and that the highest abundances occur in suburban areas compared to urban or rural areas. Thus, our study shows the importance of suburban areas, where the majority of birds occur with fairly high species richness.