Patricia Caldera
University of California, San Francisco
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Life Sciences | 1987
Anthony J. Trevor; Neal Castagnoli; Patricia Caldera; Rona R. Ramsay; Thomas P. Singer
Expression of the selective nigrostriatal neurotoxicity of 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine [MPTP] requires its bioactivation by MAO B which leads to the formation of potentially reactive metabolites including the 2-electron oxidation product, 1-methyl-4-phenyl-2,3-dihydropyridinium species [MPDP+] and the 4-electron oxidation product, the 1-methyl-4-phenyl pyridinium species [MPP+]. The latter metabolite accumulates in brain striatal tissues, is a substrate for dopaminergic active uptake systems and is an inhibitor of mitochondrial NADH dehydrogenase, a respiratory chain enzyme located in the inner mitochondrial membrane. In intact mitochondria this inhibition of respiration may be facilitated by active uptake of MPP+, a process dependent on the membrane electrical gradient. In considering possible mechanisms involved in the biochemical effects of MPP+, its redox cycling potential appears to be much lower than its chemical congener paraquat, based on attempted radical formation by chemical or enzymic reduction. Theoretically, a carbon-centered radical intermediate could be formed by 1-electron reduction of MPP+, or by 1-electron oxidation of 1-methyl-4-phenyl-1,2-dihydropyridine, the free base form of MPDP+. The 1-electron reduction of such a radical could form 1-methyl-4-phenyl-1,4-dihydropyridine [DHP]. Synthetic DHP is neurotoxic in C57B mice, and its administration leads to the formation of MPP+ in the brain, presumably through rapid auto-oxidation. The hydrolysis of DHP would yield 3-phenylglutaraldehyde and methylamine. Recent studies demonstrating the formation of methylamine in brain mitochondrial preparations containing MPTP support our suggestion that DHP may be a brain metabolite of MPTP.
Bioorganic & Medicinal Chemistry | 1997
Patricia Caldera; Zhonghua Yu; Ronald M.A. Knegtel; Fiona McPhee; Alma L. Burlingame; Charles S. Craik; Irwin D. Kuntz; Paul R. Ortiz de Montellano
Specific irreversible inhibition of the SIV protease by FMOC-protected piperidine epoxide 1 involves alkylation of the protein. Tryptic digestion of the alkylated protein and mass spectrometric analysis of the peptides identify an active site aspartic acid (Asp-25) as the single residue that is alkylated. Computer modeling of 1 bound in the crystal structure of the SIV protease using DOCK 3.5 indicates that 1 has appropriate access to the active site. It is able to align in an orientation that allows a proton to be transferred to the epoxide from one of the catalytic aspartic acid groups in conjunction with nucleophilic attack on the epoxide of the carboxylate moiety of the second catalytic aspartic acid residue. Hydrophobic interactions are not optimal for this process due, in part, to the rigidity of the inhibitor ring system and the planar conformation of the amide. The combination of modeling with protein alkylation can provide insights into structural modifications of the inhibitor that may lead to improved inhibitory activity.
Journal of Medicinal Chemistry | 1985
Jeff Weissman; Anthony J. Trevor; Kan Chiba; Lisa A. Peterson; Patricia Caldera; Neal Castagnoli; Thomas A. Baillie
Archives of Biochemistry and Biophysics | 1987
Maria Almira Correia; Caroline J. Decker; Katsumi Sugiyama; Patricia Caldera; Lester M. Bornheim; Steven A. Wrighton; Allan E. Rettie; William F. Trager
Biochemical Journal | 1996
Fiona McPhee; Patricia Caldera; Guy W. Bemis; Antony F. McDonagh; Irwin D. Kuntz; Charles S. Craik
Molecular Pharmacology | 1987
Lester M. Bornheim; Marilyn Underwood; Patricia Caldera; Rettie Ae; W F Trager; S A Wrighton; Maria Almira Correia
Journal of Medicinal Chemistry | 1985
Lisa A. Peterson; Patricia Caldera; Anthony J. Trevor; Kan Chiba; Neal Castagnoli
Journal of the American Chemical Society | 1996
Zhonghua Yu; Patricia Caldera; Fiona McPhee; James J. De Voss; Patrick Jones; Alma L. Burlingame; Irwin D. Kuntz; and Charles S. Craik; Paul R. Ortiz de Montellano
Journal of Medicinal Chemistry | 1990
Hans Rollema; Ea Johnson; Rg Booth; Patricia Caldera; Peter Lampen; Sk Youngster; Aj Trevor; Noreen Naiman; Neal Castagnoli
Journal of Medicinal Chemistry | 1990
Hans Rollema; Johnson Ea; Raymond G. Booth; Patricia Caldera; Peter Lampen; Youngster Sk; Anthony J. Trevor; Noreen Naiman; Neal Castagnoli