Renata O. Santos

Spathaspora arborariae sp. nov., a d-xylose-fermenting yeast species isolated from rotting wood in Brazil

Four strains of a new yeast species were isolated from rotting wood from two sites in an Atlantic Rain Forest and a Cerrado ecosystem in Brazil. The analysis of the sequences of the D1/D2 domains of the large-subunit rRNA gene showed that this species belongs to the Spathaspora clade. The new species ferments D-xylose efficiently and is related to Candida jeffriesii and Spathaspora passalidarum, both of which also ferment D-xylose. Similar to S. passalidarum, the new species produces unconjugated asci with a single greatly elongated ascospore with curved ends. The type strain of Spathaspora arborariae sp. nov. is UFMG-HM19.1A(T) (=CBS11463(T)=NRRL Y-48658(T)).

Selection, growth, and chemo-sensory evaluation of flocculent starter culture strains of Saccharomyces cerevisiae in the large-scale production of traditional Brazilian cachaça

The physiological and kinetic capabilities of 233 Saccharomyces cerevisiae isolates, originating from traditional Brazilian cachaça fermentation, were evaluated under laboratory conditions to select flocculent and non-H2S producing strains to be employed in beverage production. Three flocculent S. cerevisiae strains were selected, two non-H2S producing and one H2S producing, and their kinetic performances were analysed during two large-scale fermentation experiments in a traditional cachaça distillery. One non-flocculent H2S-producing S. cerevisiae strain was also used for comparison with the flocculent strains. The results of mitochondrial DNA restriction analysis showed that the three flocculent starter S. cerevisiae strains, as well as the non-flocculent strain, remained in the process during the whole fermentation period, with cells numbering around 10(7) cfu/ml. All selected strains produced ethanol yields that were typically higher in the distillery than in the laboratory conditions, except for strain UFMGA-1240. The greatest diversity of non-Saccharomyces yeasts was observed prior to day 21 of cachaça fermentation; Pichia membranifaciens and Hanseniaspora guilliermondii were the most frequently isolated species. These yeasts were present in lower densities throughout the whole process. The cachaça produced by the selected strains contained concentrations of chemical compounds in accordance with current Brazilian legislation, and all cachaças scored well in sensory effective tests. In addition to the advantage of being flocculent, the strain UFMGA-1031 is non-H2S producing and also produces cachaça with good sensory acceptance. Therefore, this flocculent and non-H2S producing S. cerevisiae strain is highly suitable as a starter for production of high quality traditional cachaça.

Evidence of Natural Hybridization in Brazilian Wild Lineages of Saccharomyces cerevisiae.

The natural biology of Saccharomyces cerevisiae, the best known unicellular model eukaryote, remains poorly documented and understood although recent progress has started to change this situation. Studies carried out recently in the Northern Hemisphere revealed the existence of wild populations associated with oak trees in North America, Asia, and in the Mediterranean region. However, in spite of these advances, the global distribution of natural populations of S. cerevisiae, especially in regions were oaks and other members of the Fagaceae are absent, is not well understood. Here we investigate the occurrence of S. cerevisiae in Brazil, a tropical region where oaks and other Fagaceae are absent. We report a candidate natural habitat of S. cerevisiae in South America and, using whole-genome data, we uncover new lineages that appear to have as closest relatives the wild populations found in North America and Japan. A population structure analysis revealed the penetration of the wine genotype into the wild Brazilian population, a first observation of the impact of domesticated microbe lineages on the genetic structure of wild populations. Unexpectedly, the Brazilian population shows conspicuous evidence of hybridization with an American population of Saccharomyces paradoxus. Introgressions from S. paradoxus were significantly enriched in genes encoding secondary active transmembrane transporters. We hypothesize that hybridization in tropical wild lineages may have facilitated the habitat transition accompanying the colonization of the tropical ecosystem.

Cyberlindnera xylosilytica sp. nov., a xylitol-producing yeast species isolated from lignocellulosic materials.

Independent surveys of yeasts associated with lignocellulosic-related materials led to the discovery of a novel yeast species belonging to the Cyberlindnera clade (Saccharomycotina, Ascomycota). Analysis of the sequences of the internal transcribed spacer (ITS) region and the D1/D2 domains of the large subunit rRNA gene showed that this species is related to C. japonica, C. maesa and C. easanensis. Six isolates were obtained from different sources, including rotting wood, tree bark and sugar cane filter cake in Brazil, frass from white oak in the USA and decayed leaf in Taiwan. A novel species is suggested to accommodate these isolates, for which the name C. xylosilytica sp. nov. is proposed. The type strain of C. xylosilytica sp. nov. is NRRL YB-2097(T) ( = CBS 13984(T) = UFMG-CM-Y347(T)) and the allotype is UFMG-CM-Y409 ( = CBS 14083). The novel species is heterothallic and complementary mating types are represented by the type and allotype strains. The MycoBank number is MB 811428.

Efeitos de diferentes proporções de prática constante e aleatória na aquisição de habilidades motoras

O presente estudo teve como objetivo investigar os efeitos de diferentes proporcoes de pratica constante e aleatoria na aquisicao de habilidades motoras. Trinta voluntarios entre 18 e 35 anos de idade foram aleatoriamente distribuidos em tres grupos com diferentes proporcoes de pratica constante e aleatoria: 1) 25% constante e 75% aleatorio (G25%); 2) 50% constante e 50% aleatorio (G50%); 3) 75% constante e 25% aleatorio (G75%). Os sujeitos pressionaram uma sequencia pre-determinada de teclas no teclado de um computador com diferentes requerimentos de tempo absoluto em uma mesma estrutura de tempo relativo. Todos os participantes realizaram 120 tentativas de pratica na fase de aquisicao. Dez tentativas de pratica foram requeridas em cada um dos testes de retencao e transferencia. Os resultados obtidos atraves de analise de variância com medidas repetidas no segundo fator (p < 0,05) mostraram que a proporcao de 75% de pratica constante seguida por 25% de pratica aleatoria apresentou resultados favoraveis em termos de menor variabilidade na aprendizagem motora.

Xylose and cellobiose fermentation by yeasts isolated from the Brazilian biodiversity

Background The production of fuel ethanol has become important in recent years due not only to the future depletion of fossil fuels, but also environmental concerns. An attractive source of raw material for ethanol production is the lignocellulosic biomass, composed of lignin, cellulose and hemicellulose. In the case of Brazil, the sugarcane bagasse is an interesting source of cellulose and hemicellulose, polymers that can be used in the fermentative process for fuel alcohol production [1]. Although the industrial yeast Saccharomyces cerevisiae efficiently ferments hexoses, this yeast is unable to ferment pentoses such as xylose (present in hemicellulose hydrolysates) or the disaccharide cellobiose (present in cellulose hydrolysates). Thus, we have characterized the enzymes and transport systems involved in xylose and cellobiose fermentation by yeasts species isolated in rotten wood from several Brazilian ecosystems [2-4].

Multiple Rounds of Artificial Selection Promote Microbe Secondary Domestication—The Case of Cachaça Yeasts

Abstract The study of microbe domestication has witnessed major advances that contribute to a better understanding of the emergence of artificially selected phenotypes and set the foundations of their rational improvement for biotechnology. Several features make Saccharomyces cerevisiae an ideal model for such a study, notably the availability of a catalogue of signatures of artificial selection and the extensive knowledge available on its biological processes. Here, we investigate with population and comparative genomics a set of strains used for cachaça fermentation, a Brazilian beverage based on the fermentation of sugar cane juice. We ask if the selective pressures posed by this fermentation have given rise to a domesticated lineage distinct from the ones already known, like wine, beer, bread, and sake yeasts. Our results show that cachaça yeasts derive from wine yeasts that have undergone an additional round of domestication, which we define as secondary domestication. As a consequence, cachaça strains combine features of wine yeasts, such as the presence of genes relevant for wine fermentation and advantageous gene inactivations, with features of beer yeasts like resistance to the effects of inhibitory compounds present in molasses. For other markers like those related to sulfite resistance and biotin metabolism our analyses revealed distributions more complex than previously reported that support the secondary domestication hypothesis. We propose a multilayered microbe domestication model encompassing not only transitions from wild to primarily domesticated populations, as in the case of wine yeasts, but also secondary domestications like those of cachaça yeasts.