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Dive into the research topics where Ryota Suzuki is active.

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Featured researches published by Ryota Suzuki.


Bioinformatics | 2006

Pvclust: an R package for assessing the uncertainty in hierarchical clustering

Ryota Suzuki; Hidetoshi Shimodaira

SUMMARY Pvclust is an add-on package for a statistical software R to assess the uncertainty in hierarchical cluster analysis. Pvclust can be used easily for general statistical problems, such as DNA microarray analysis, to perform the bootstrap analysis of clustering, which has been popular in phylogenetic analysis. Pvclust calculates probability values (p-values) for each cluster using bootstrap resampling techniques. Two types of p-values are available: approximately unbiased (AU) p-value and bootstrap probability (BP) value. Multiscale bootstrap resampling is used for the calculation of AU p-value, which has superiority in bias over BP value calculated by the ordinary bootstrap resampling. In addition the computation time can be enormously decreased with parallel computing option.


Journal of the Physical Society of Japan | 2014

Supersolid states in a hard-core Bose-Hubbard model on a layered triangular lattice

Ryota Suzuki; Akihisa Koga

We study the ground-state properties in a hard-core Bose–Hubbard model on a layered triangular lattice. With the combined use of the cluster mean-field theory and the density matrix renormalization group method, we discuss the effect of interlayer coupling on supersolid states realized in a single-layered model. By examining the distributions for the particle density and superfluid order parameter, a rich phase diagram of the system is obtained. We find that supersolid states are widely stabilized at commensurate filling, in contrast to those in the case of the single-layered model. The nature of supersolid states is also addressed.


arXiv: Quantum Gases | 2014

Cluster mean-field approach with density matrix renormalization group: Application to the hard-core bosonic Hubbard model on a triangular lattice

Ryota Suzuki; Akihisa Koga

We introduce a new numerical method for the solution of self-consistent equations in the cluster mean-field theory. The method uses the density matrix renorm alization group method to solve the associated cluster problem. We obtain an accurate critical value of the supersolid-superfluid transitions in the hard-core bosonic Hubbard model on a triangular lattice, which is comparable with the recent quantum Monte Carlo results. This algorithm is applicable to more general classes of models with a larger number of degrees of freedom.


Genome Research | 2004

Mitochondrial Genome Variation in Eastern Asia and the Peopling of Japan

Masashi Tanaka; Vicente M. Cabrera; Ana M. González; J. M. Larruga; Takeshi Takeyasu; Noriyuki Fuku; Li Jun Guo; Raita Hirose; Yasunori Fujita; Miyuki Kurata; Ken-ichi Shinoda; Kazuo Umetsu; Yoshiji Yamada; Yoshiharu Oshida; Yuzo Sato; Nobutaka Hattori; Yoshikuni Mizuno; Yasumichi Arai; Nobuyoshi Hirose; Shigeo Ohta; Osamu Ogawa; Yasushi Tanaka; Ryuzo Kawamori; Masayo Shamoto-Nagai; Wakako Maruyama; Hiroshi Shimokata; Ryota Suzuki; Hidetoshi Shimodaira


Archive | 2011

PHOSPHOR COMPOSITE MEMBER, LED DEVICE AND METHOD FOR MANUFACTURING PHOSPHOR COMPOSITE MEMBER

Shunsuke Fujita; Ryota Suzuki; Tadahito Furuyama


Archive | 2003

Ubiquitous matching system and method

Yuichi Fujino; Hikari Morita; Yoshihiro Nomoto; Ryota Suzuki; Hiroshi Tanaka; 光 森田; 博 田中; 雄一 藤野; 義弘 野本; 良太 鈴木


Archive | 2003

COMMUNICATION SERVICE METHOD AND COMMUNICATION SERVICE SYSTEM USING POSITIONAL INFORMATION

Yuichi Fujino; Takashi Matsuoka; Hikari Morita; Yoshihiro Nomoto; Ryota Suzuki; Hiroshi Tanaka; 隆志 松岡; 光 森田; 博 田中; 雄一 藤野; 義弘 野本; 良太 鈴木


Archive | 2003

Contents providing system and method therefor, and contents mediating server

Yuichi Fujino; Hikari Morita; Yoshihiro Nomoto; Masafumi Shimizu; Ryota Suzuki; Hiroshi Tanaka; Shuichi Yoshino; 修一 吉野; 光 森田; 雅史 清水; 博 田中; 雄一 藤野; 義弘 野本; 良太 鈴木


Archive | 2012

Phosphor composite member

Shunsuke Fujita; Ryota Suzuki; 俊輔 藤田; 良太 鈴木


Archive | 2003

Information transmission system and method thereof based on location information

Yuichi Fujino; Hikari Morita; Yoshihiro Nomoto; Ryota Suzuki; Hiroshi Tanaka; 光 森田; 博 田中; 雄一 藤野; 義弘 野本; 良太 鈴木

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Akihisa Koga

Tokyo Institute of Technology

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Hidetoshi Shimodaira

Tokyo Institute of Technology

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Hiroshi Shimokata

Nagoya University of Arts and Sciences

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Hiroshi Tanaka

Tokyo Institute of Technology

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