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Dive into the research topics where Toshiaki Katayama is active.

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Featured researches published by Toshiaki Katayama.


Genes to Cells | 2004

An interactive gene network for securin-separase, condensin, cohesin, Dis1/Mtc1 and histones constructed by mass transformation

Tatsuro Yuasa; Takeshi Hayashi; Nobuyasu Ikai; Toshiaki Katayama; Keita Aoki; Takayuki Obara; Yusuke Toyoda; Takeshi Maruyama; Daisuke Kitagawa; Kohta Takahashi; Koji Nagao; Yukinobu Nakaseko; Mitsuhiro Yanagida

The small genome of fission yeast Schizosaccharomyces pombe contains 4824 predicted genes and gene disruption suggests that ∼850 are essential for viability. To obtain information on interactions among genes required for chromosome segregation, an approach called Strategy B was taken using mass transformation of the 1015 temperature‐sensitive (ts) mutants that were made by random mutagenesis and transformed by plasmids carrying the genes for securin, separase, condensin, cohesin, kinetochore microtubule‐binding proteins Dis1/Mtc1 or histones. Mutant strains whose phenotypes were either suppressed or inhibited by plasmids were selected. Each plasmid interacted positively or negatively with the average 14 strains. Identification of the mutant gene products by cloning revealed many hitherto unknown interactions. The interactive networks of segregation therefore may consist of genes with a variety of functions. For example, separase/Cut1 interacts with Cdc48/p97/VCP, which stabilizes securin and separase. Surprisingly, S. pombe cdc48 mutants displayed the mitotic phenotype highly similar to separase/cut1 mutants. This approach also provides a novel way of mutant isolation, resulting in two histone H2B strains and a cohesion mutant with a new phenotype.


Genome Informatics | 2001

Discovery and Classification of Peptide Family G-Protein Coupled Receptors in the Human Genome Sequence

Maria E. Levchenko; Toshiaki Katayama; Minoru Kanehisa


Genome Informatics | 2002

Comprehensive Analysis of Tandem Repeat Sequences in Cyanobacteria Genome

Toshiaki Katayama; Shinobu Okamoto; Rei Narikawa; Takatomo Fujisawa; Shuichi Kawashima; Masumi Itoh; Masayuki Ohmori; Minoru Kanehisa


Genome Informatics | 2000

The Role of Gene Expression Regulation in Yeast Cell Cycle Pathway

Toshiaki Katayama; Minoru Kanehisa


Genome Informatics | 2002

BioRuby: Object Oriented Open Source Library for Bioinformatics

Toshiaki Katayama; Shuichi Kawashima; Naohisa Goto; Mitsuteru Nakao; Yoshinori K. Okuji; Minoru Kanehisa


SWAT4LS | 2017

SPARQList: Markdown-Based Highly Configurable REST API Hosting Server for SPARQL.

Toshiaki Katayama; Shuichi Kawashima


SWAT4LS | 2017

SPARQL-Proxy: A Generic Proxy Server for SPARQL Endpoint.

Shuichi Kawashima; Toshiaki Katayama


SWAT4LS | 2017

Construction of Knowledge-Base for Clinical Interpretation of Genomic Variants.

Mayumi Kamada; Toshiaki Katayama; Shuichi Kawashima; Ryosuke Kojima; Masahiko Nakatsui; Yasushi Okuno


SWAT4LS | 2012

Semantic Integration of the Genome Annotations.

Toshiaki Katayama; Shinobu Okamoto; Shuichi Kawashima; Hiroshi Mori; Takatomo Fujisawa


Archive | 2003

Classication of Protein Sequences into Paralog and Ortholog Clusters Using Sequence Similarity Proles of

Yohsuke Minowa; Toshiaki Katayama; Akihiro Nakaya; Susumu Goto; Minoru Kanehisa

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Takatomo Fujisawa

National Institute of Genetics

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Hiroshi Mori

Tokyo Institute of Technology

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