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Featured researches published by Yafei Duan.


Fish & Shellfish Immunology | 2015

Oxidative stress response of the black tiger shrimp Penaeus monodon to Vibrio parahaemolyticus challenge

Yafei Duan; Jiasong Zhang; Hongbiao Dong; Yun Wang; Qingsong Liu; Hua Li

Vibrio parahaemolyticus is a virulent pathogen that affects shrimp aquaculture. Reactive oxygen species are produced by the immune system that defends the host against foreign microorganisms. In the present study, the oxidative stress response in hepatopancreas and gills of Penaeus monodon to V. parahaemolyticus challenge were studied, such as respiratory burst, ROS production (·O2(-) and ·OH), activities of antioxidant enzymes (CAT, GPx, SOD, POD and GST) and oxidative damage to lipid and protein (indexed by contents of MDA). Compared with the control group, after V. parahaemolyticus challenge, respiratory burst and ROS production were up-regulated significantly. GPx and POD activity increased significantly in hepatopancreas and gills of the shrimps at 12 h, but CAT activity decreased markedly at 12 h and 24 h. SOD and GST activity in hepatopancreas of the shrimps increased significantly at 1.5 h, but decreased markedly at 12 h-48 h. MDA content increased significantly after 6 h-24 h challenge. HE staining showed that V. parahaemolyticus challenge induced damage symptoms in hepatopancreas of P. monodon. Our study revealed that V. parahaemolyticus influenced the antioxidative status and caused oxidative stress and tissue damage via confusion of antioxidant enzymes in P. monodon.


Fish & Shellfish Immunology | 2017

Effect of dietary poly-β-hydroxybutyrate (PHB) on growth performance, intestinal health status and body composition of Pacific white shrimp Litopenaeus vannamei (Boone, 1931).

Yafei Duan; Yue Zhang; Hongbiao Dong; Xiaoting Zheng; Yun Wang; Hua Li; Qingsong Liu; Jiasong Zhang

ABSTRACT In the present study, the effect of dietary supplementation of poly‐&bgr;‐hydroxybutyrate (PHB) on the growth performance, intestinal digestive and immune function, intestinal short‐chain fatty acids (SCFA) content and body composition of Pacific white shrimp Litopenaeus vannamei (Boone, 1931) was evaluated. The shrimp was fed for 35 days with four different diets: 0%, 1%, 3% and 5% PHB supplemented feed. The results indicated that supplementation of PHB significantly increased the growth performance of the shrimp, and the feed conversion rate (FCR) in 3%PHB treatment group was significantly lower than the control (P < 0.05). The intestinal amylase, lipase and trypsin activity in the three PHB treatment groups were all significantly higher than that of the control (P < 0.05), but the pepsin activity were only significantly affected by 3%PHB treatment (P > 0.05). The activities of intestinal immune enzymes such as total antioxidant capacity (T‐AOC) and inducible nitric oxide synthase (iNOS) was significantly induced by 3%PHB treatment (P < 0.05), while lysozyme (LSZ) activity was significantly affected by 5%PHB treatment and nitric oxide (NO) content was significantly induced in three PHB treatments. Meanwhile, PHB induced significantly the expression level of intestinal heat shock protein 70 (HSP70), Toll and immune deficiency (Imd) gene. HE staining showed that PHB induced the intestinal health status of L. vannamei. Intestinal SCFA content analysis revealed that the content of propionic and butyric acid of 3%PHB treatment were significantly higher than that of the control (P < 0.05). Body composition analysis showed that the crude protein in 3% and 5%PHB treatments, and the crude lipid in 1% and 5%PHB treatments were all significantly higher than the control (P < 0.05). These results revealed that PHB could improve the growth performance, modulated intestinal digestive and immune function, increased intestinal SCFA content and body composition in L. vannamei, and the optimum dietary PHB requirement by L. vannamei was estimated at 3% (w/w) diet. HIGHLIGHTSThe effect of dietary poly‐&bgr;‐hydroxybutyrate (PHB) supplementation in Litopenaeus vannamei was studied.PHB improved the growth performance and feed utilization of L. vannamei.PHB increased the intestinal digestive and immune function of L. vannamei.PHB influenced the intestinal structure and SCFA content of L. vannamei.PHB changed the body composition of L. vannamei.


Fish & Shellfish Immunology | 2017

Effects of dietary Lactobacillus plantarum in different treatments on growth performance and immune gene expression of white shrimp Litopenaeus vannamei under normal condition and stress of acute low salinity

Xiaoting Zheng; Yafei Duan; Hongbiao Dong; Jiasong Zhang

ABSTRACT A 45‐day feeding trial followed by an acute stress test of low salinity was done to evaluate effects of Lactobacillus plantarum on growth performance and anti‐stress capability of white shrimp (Litopenaeus vannamei). Shrimp were randomly allocated in 15 tanks (100 shrimp per tank) and divided into 5 treatments with 3 replicates. Triplicate tanks were fed with a control diet or diets containing different treatments of L. plantarum (fermentation supernatant (FS), live bacteria (LB), dead bacteria (DB) and cell‐free extract (CE) of L. plantarum) as treatment groups. Growth performance including weight gain (WGR), feed conversion ratio (FCR) and specific growth rate (SGR) were determined after feeding 45 days. Anti‐stress capacity was evaluated by determining the gene expression of ProPO, SOD and Lys in gut of shrimp at the end of feeding trial and again at 96 h post‐stress test. Results indicated that supplementation of L. plantarum into diet had significantly improved growth performance of L. vannamei. On the other hand, L. plantarum supplementation had no significant effects on the gene expression of SOD and Lys in gut of shrimp cultured under normal condition for 45 days. Supplementation of L. plantarum had increased survivability of L. vannamei having higher survival rates compared to the control group. However, statistical analysis showed no significant difference between the control group and treatments. Compared with the control group, supplementation of L. plantarum significantly improved the resistance of L. vannamei against the stress of acute low salinity, as indicated by higher survival rate as well as higher transcript levels of ProPo, SOD and Lys gene. Our findings suggested that L. plantarum, especially cell‐free extract of L. plantarum has improved the anti‐stress capacity of L. vannamei and could serve as a potential feed additive that helps shrimp to overcome environmental stresses. HighlightsDietary L. plantarum in four different treatments were used in the experiment.L. plantarum has significantly improved growth parameters (FBW, WGR and SGR) of L. vannamei.Cell‐free extract of L. plantarum showed the highest growth parameters.L. plantarum improved the resistance of L. vannamei against the stress of acute low salinity.


Fish & Shellfish Immunology | 2017

Effect of dietary Clostridium butyricum on growth, intestine health status and resistance to ammonia stress in Pacific white shrimp Litopenaeus vannamei

Yafei Duan; Yue Zhang; Hongbiao Dong; Yun Wang; Xiaoting Zheng; Jiasong Zhang

&NA; The present study evaluated the effect of dietary Clostridium butyricum (CB) on growth, intestine microstructure, intestine digestive and immune function, intestine short‐chain fatty acids (SCFA) content and body composition of Pacific white shrimp Litopenaeus vannamei. The shrimp was fed for 56 d with diets containing different levels of C. butyricum (1 × 109 cfu/g): 0% (Control), 0.25% (CB1), 0.5% (CB2) and 1.0% (CB3) as treatment groups, followed by an acute ammonia stress test for 72 h. The results indicated that dietary supplementation of C. butyricum decreased the feed conversion rate (FCR) and increased the growth performance of shrimp. Compared with the control group, after shrimp fed with C. butyricum 56 d, intestine amylase and protease activity in the three C. butyricum group increased, while lipase activity was only affected in the CB1 and CB2 group. Total antioxidant capacity (T‐AOC) content, lysozyme (LSZ) activity, and the relative expression level of Toll and immune deficiency (Imd) gene all increased in three C. butyricum groups. Inducible nitric oxide synthase (iNOS) activity increased in the CB2 and CB3 group, heat shock protein 70 (HSP70) gene expression level increased in the CB3 group, while nitric oxide (NO) content was not affected by C. butyricum. After shrimp exposed to ammonia stress, intestine immune biochemical parameters (T‐AOC, LSZ, iNOS and NO) and genes (HSP70, Toll and Imd) expression level of C. butyricum group was higher than that of the control. HE stain showed that C. butyricum increased the intestine epithelium height of L. vannamei. These results revealed that C. butyricum could improve the growth performance, increased intestine SCFA content and body crude protein content, modulated intestine digestive capacity, and enhanced intestine immune function of L. vannamei against ammonia stress. HighlightsEffect of dietary Clostridium butyricum supplementation in Litopenaeus vannamei was studied.C. butyricum improved the growth performance and feed utilization of L. vannamei.C. butyricum enhanced the intestine structure, digestive enzyme and SCFA content of L. vannamei.C. butyricum increased the intestine immune function of L. vannamei resistance to ammonia stress.C. butyricum increased body crude protein content of L. vannamei.


Fish & Shellfish Immunology | 2017

Intestine oxidative stress and immune response to sulfide stress in Pacific white shrimp Litopenaeus vannamei.

Yafei Duan; Hongbiao Dong; Yun Wang; Hua Li; Qingsong Liu; Yue Zhang; Jiasong Zhang

Abstract The effects of sulfide stress on oxidative stress and immune response in intestine of Pacific white shrimp Litopenaeus vannamei were evaluated in the present study. Oxidative stress parameters, immune enzymes activity and immune gene mRNA expression level were detected in intestine of L. vannamei after the exposure of 5.0 mg/L sulfide stress 72 h. The duration of sulfide stress influenced the shrimp survival, and the cumulative mortality rate was 30.0% and 33.3% at 48 h and 72 h respectively. HE staining showed that sulfide stress caused the intestine tissue damage symptoms. Compared with the control group, after exposed to sulfide stress, the content of lipid peroxidation (LPO), malondialdehyde (MDA) and ROS production (·O2− generation capacity) increased. Total antioxidant capacity (T‐AOC) activity increased at 6 h and decreased at 48 h. Superoxide dismutase (SOD) activity increased in the entire experiment. Inducible nitric oxide synthase (iNOS) activity and nitric oxide (NO) content increased to the highest at 6 h and 12 h respectively, and both decreased at 48 h. The relative mRNA expression level of heat shock protein 70 (HSP70) gene decreased at 6 h and increased to the highest at 48 h. The relative mRNA expression level of hypoxia inducible factor 1&agr; (HIF‐1&agr;) gene increased at 12 h and decreased to a lower level at 72 h. The relative mRNA expression level of Toll and immune deficiency (Imd) gene increased to the highest at 12 h and 24 h respectively, and both decreased at 48 h. These results revealed that sulfide stress could induce oxidative stress and immune response via confusion of immune enzymes activity and gene expression level in intestine of L. vannamei. HighlightsEffect of sulfide stress on oxidative stress and immune response in intestine of Litopenaeus vannamei was studied.Sulfide stress caused the oxidative stress and tissue damage in intestine of L. vannamei.Sulfide stress influenced the immune enzymes activity in intestine of L. vannamei.Sulfide stress induced the expression of immune genes in intestine of L. vannamei.


Fish & Shellfish Immunology | 2015

The role of oncoprotein NM23 gene from Exopalaemon carinicauda is response to pathogens challenge and ammonia-N stress.

Yafei Duan; Jitao Li; Zhe Zhang; Jian Li; Qianqian Ge; Ping Liu

Oncoprotein NM23, as a family of genes encoding the nucleoside diphosphate (NDP) kinase, plays important roles in bioenergetics, DNA replication, differentiation and tumor metastasis. In this study, a full-length cDNA of NM23 (designated EcNM23) was cloned from Exopalaemon carinicauda by using rapid amplification of cDNA ends (RACE) approaches. The full-length cDNA of EcNM23 was 755 bp, which contains an open reading frame (ORF) of 518 bp, encoding a 175 amino-acid polypeptide with the predicted molecular weight of 19.60 kDa and estimated isoelectric point of 7.67. The deduced amino acid sequence of EcNM23 shared high identity (86%-93%) with that of other crustaceans. a NDP kinase super family signature was identified in E. carinicauda EcNM23. Quantitative real-time RT-qPCR analysis indicated that EcNM23 was expressed in all the examined tissues with the high expression level in hemocytes and ovary. The EcNM23 expression in immune-related tissues changed rapidly and reached peak at different time after pathogens (Vibrio parahaemolyticus and WSSV) challenge and ammonia-N stress treatment. The results suggested that EcNM23 might be associated with the immune defenses to pathogens infection and ammonia-N stress in E. carinicauda.


Fish & Shellfish Immunology | 2018

Dietary effects of succinic acid on the growth, digestive enzymes, immune response and resistance to ammonia stress of Litopenaeus vannamei

Yafei Duan; Yun Wang; Jiasong Zhang; Yongxu Sun; Jun Wang

ABSTRACT Organic acids acts as an growth promoter and antimicrobial agent in aquaculture. The present study investigated the effects of a natural organic acid ‐ succinic acid (SA) on the growth, digestive enzymes, immune response and resistance to ammonia stress of Litopenaeus vannamei. The shrimps were firstly fed with diets containing different levels of SA: 0% (Control), 0.25% (SA1), 0.50% (SA2), and 1.0% (SA3) (w/w) for 56 days, followed by an acute ammonia stress for 48h. The results indicated that dietary of SA improved the growth of shrimp, and increased the survival rate of shrimp after ammonia stress for 48h. The amylase, lipase and pepsin activity increased in hepatopancreas in three SA group, while trypsin activity was only increased in the SA1 and SA2 groups. At 56d, T‐NOS activity, proPO and HSP70 gene expression level increased in the three SA group, PO activity increased in the SA1 and SA2 groups, T‐AOC content and Toll gene expression level increased in the SA2 and SA3 groups, Trx and SOD gene expression level increased in the SA2 group, while Imd, GS and GDH gene expression level was no changes. After exposure to ammonia stress for 48h, immune biochemical parameters (T‐AOC and PO) and genes (proPO, HSP70, Trx and GDH) expression level increased in the three SA group, T‐NOS activity, Toll, Imd and GS gene expression level increased in the SA2 and SA3 groups, while SOD gene expression level increased in the SA1 and SA2 groups. These results indicated that SA improved growth, enhanced digestive and immune capacities of L. vannamei against ammonia stress, and may be a potential feed additive for shrimp. The optimal dietary supplementation dosage is 0.50% (w/w) in diet. HIGHLIGHTSEffects of dietary succinic acid (SA) supplementation in Litopenaeus vannamei was studied.SA improved the growth performance and feed utilization of L. vannamei.SA influenced the digestive enzymes of L. vannamei.SA increased the immune capacity of L. vannamei resistance to ammonia stress.


Chinese Journal of Oceanology and Limnology | 2015

Na+/K+-ATPase α-subunit in swimming crab Portunus trituberculatus: molecular cloning, characterization, and expression under low salinity stress

Xiaolin Han; Ping Liu; Baoquan Gao; Haofeng Wang; Yafei Duan; Wenfei Xu; Ping Chen

Na+/K+-ATPases are membrane-associated enzymes responsible for the active transport of Na+ and K+ ions across cell membranes, generating chemical and electrical gradients. These enzymes’ α-subunit provides catalytic function, binding and hydrolyzing ATP, and itself becoming phosphorylated during the transport cycle. In this study, Na+/K+-ATPase α-subunit cDNA was cloned from gill tissue of the swimming crab Portunus trituberculatus by reverse-transcription polymerase chain reaction (RT-PCR) and rapid amplification of cDNA end methods. Analysis of the nucleotide sequence revealed that the cDNA had a full-length of 3 833 base pairs (bp), with an open reading frame of 3 120 bp, 5′ untranslated region (UTR) of 317 bp, and 3′ UTR of 396 bp. The sequence encoded a 1 039 amino acid protein with a predicted molecular weight of 115.57 kDa and with estimated pI of 5.21. It was predicted here to possess all expected features of Na+/K+-ATPase members, including eight transmembrane domains, putative ATP-binding site, and phosphorylation site. Comparison of amino acid sequences showed that the P. trituberculatus α-subunit possessed an overall identity of 75%–99% to that of other organisms. Phylogenetic analysis revealed that this α-subunit was in the same category as those of crustaceans. Quantitative real-time RT-PCR analysis indicated that this α-subunit’s transcript were most highly expressed in gill and lowest in muscle. RT-PCR analysis also revealed that α-subunit expression in crab gill decreased after 2 and 6 h, but increased after 12, 24, 48, and 72 h. In addition, α-subunit expression in hepatopancreas of crab decreased after 2-72 h. These facts indicated that the crab’s Na+/K+-ATPase α-subunit was potentially involved in the observed acute response to low salinity stress.


Journal of Microbiology | 2017

Effects of dietary poly-β-hydroxybutyrate (PHB) on microbiota composition and the mTOR signaling pathway in the intestines of litopenaeus vannamei

Yafei Duan; Yue Zhang; Hongbiao Dong; Yun Wang; Jiasong Zhang

Poly-β-hydroxybutyrate (PHB) is a natural polymer of the short chain fatty acid β-hydroxybutyrate, which acts as a microbial control agent. The mammalian target of the rapamycin (mTOR) signaling pathway plays a crucial role in intestine inflammation and epithelial morphogenesis. In this study, we examined the composition of intestine microbiota, and mTOR signaling-related gene expression in Pacific white shrimp Litopenaeus vannamei fed diets containing different levels of PHB: 0% (Control), 1% (PHB1), 3% (PHB3), and 5% (PHB5) (w/w) for 35 days. High-throughput sequencing analysis revealed that dietary PHB altered the composition and diversity of intestine microbiota, and that the microbiota diversity decreased with the increasing doses of PHB. Specifically, dietary PHB increased the relative abundance of Proteobacteria and Tenericutes in the PHB1 and PHB5 groups, respectively, and increased that of Gammaproteobacteria in the three PHB groups. Alternatively, PHB decreased Alphaproteobacteria in the PHB3 and PHB5 groups. At the genus level, dietary PHB increased the abundance of beneficial bacteria, such as Bacillus, Lactobacillus, Lactococcus, Clostridium, and Bdellovibrio. The relative mRNA expression levels of the mTOR signaling-related genes TOR, 4E-BP, eIF4E1α, and eIF4E2 all increased in the three PHB treatment groups. These results revealed that dietary PHB supplementation had a beneficial effect on intestine health of L. vannamei by modulating the composition of intestine microbiota and activating mTOR signaling.


Mitochondrial DNA Part B | 2016

Sequencing of complete mitochondrial genome of sword prawn Parapenaeopsis hardwickii (Miers) (Crustacea, Decapoda, Penaeidae)

Zhichao Mao; Ping Liu; Yafei Duan; Jian Li; Ping Chen; Xianliang Meng

Abstract The sword prawn Parapenaeopsis hardwickii (Miers) (Crustacea, Decapoda, Penaeidae) is an important commercial fishery species, distributed in the East China Sea. In this study, we described the complete mitochondrial genome of P. hardwickii. The genome is 15,922 bp in length, encoding the standard set of 13 protein-coding genes, 22 tRNA genes and two rRNA genes, with circular organization. The overall A + T content is 67.20%; nucleotide frequency of the gene is as follows: A, 35.01%; C, 20.83%; G, 11.98%; T, 32.19%. The gene order of P. hardwickii is the same as Penaeus monodon and Fenneropenaeus chinensis, and it mainly retains as the Penaeidae ground pattern. The complete mitogenome sequence information of P. hardwickii would play an important part for further studies on molecular systematics and population genetics.

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Hongbiao Dong

Chinese Academy of Fishery Sciences

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Jiasong Zhang

Chinese Academy of Fishery Sciences

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Yun Wang

Chinese Academy of Fishery Sciences

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Qingsong Liu

Chinese Academy of Fishery Sciences

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Jian Li

Chinese Academy of Fishery Sciences

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Ping Liu

Chinese Academy of Fishery Sciences

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Jitao Li

Chinese Academy of Fishery Sciences

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Hua Li

Shanghai Ocean University

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Ping Chen

Chinese Academy of Fishery Sciences

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Yue Zhang

Chinese Academy of Fishery Sciences

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