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Featured researches published by Ziduo Liu.


Bioresource Technology | 2009

Combinations of mild physical or chemical pretreatment with biological pretreatment for enzymatic hydrolysis of rice hull

Jun Yu; Jibin Zhang; Jin He; Ziduo Liu; Ziniu Yu

Two novel two-step pretreatments for enzymatic hydrolysis of rice hull (RH) were proposed to lower the severity requirement of fungal pretreatment time. They consisted of a mild physical or chemical step (ultrasonic and H(2)O(2)) and a subsequent biological treatment (Pleurotus ostreatus). The combined pretreatments led to significant increases of the lignin degradation than those of one step pretreatments. After enzymatic hydrolysis of the pretreated RH, the net yields of total soluble sugar (TS) and glucose (G) increased greatly. The combined pretreatment of H(2)O(2) (2%, 48 h) and P. ostreatus (18 d) was more effective than sole pretreatment of P. ostreatus for 60 d. It could remarkably shorten the residence time and reduce the losses of carbohydrates. Ligninase analyses and SEM observations indicated that the enhancing of the efficiency could possibly attribute to the structure disruption of the RH during the first pretreatment step. So, the combined pretreatment could be recommended to different lignocellulosic materials for enzyme based conversions.


Journal of Bacteriology | 2010

Complete Genome Sequence of Bacillus thuringiensis Mutant Strain BMB171

Jin He; Xiaohu Shao; Huajun Zheng; Mingshun Li; Jieping Wang; Qingye Zhang; Lin Li; Ziduo Liu; Ming Sun; Shengyue Wang; Ziniu Yu

Bacillus thuringiensis has been widely used as a biopesticide for a long time. Here we report the finished and annotated genome sequence of B. thuringiensis mutant strain BMB171, an acrystalliferous mutant strain with a high transformation frequency obtained and stocked in our laboratory.


Bioresource Technology | 2009

Medium optimization for the production of a novel bioflocculant from Halomonas sp. V3a′ using response surface methodology.

Jin He; Quanwei Zhen; Ning Qiu; Ziduo Liu; Baojiang Wang; Zongze Shao; Ziniu Yu

The novel exopolysaccharide bioflocculant HBF-3 is produced by Halomonas sp. V3a, which is a mutant strain of the deep-sea bacterium Halomonas sp. V3a. Response surface methodology (RSM) was employed to optimize the production medium for increasing HBF-3 production. Using a Plackett-Burman experimental design to aid in the first step of optimization, edible glucose, MgSO(4) x 7 H(2)O, and NH(4)Cl were found to be significant factors affecting HBF-3 production. To determine the optimal concentration of each significant variable, a central composite design was employed. Based on response surface and canonical analysis, the optimum concentrations of the critical components were obtained as follows: edible glucose, 16.14 g/l; MgSO(4) x 7 H(2)O, 2.73 g/l; and NH(4)Cl, 1.97 g/l. HBF-3 production obtained by using the optimized medium was 4.52 g/l, which was in close agreement with the predicted value of 4.55 g/l. By scaling up fermentation from flask to fermenter, HBF-3 production was further increased to 5.58 g/l.


Applied and Environmental Microbiology | 2001

Effects of the 20-Kilodalton Helper Protein on Cry1Ac Production and Spore Formation in Bacillus thuringiensis

Zongze Shao; Ziduo Liu; Ziniu Yu

ABSTRACT Bacillus thuringiensis produces large amounts of various pesticidal proteins during the stationary phase. In order to achieve a high yield and form crystals, some pesticidal proteins require the presence of other proteins. Helper protein P20 is required for efficient production of both the Cyt1A and Cry11A crystal proteins in B. thuringiensis subsp. israelensis. Although full-length Cry1 protoxins are usually independent in terms of expression and crystallization in B. thuringiensis, in this study P20 significantly enhanced production of Cry1Ac protoxin (133 kDa) in an acrystalliferous and plasmid-negative strain. In the presence of P20, the yield of Cry1Ac protoxin increased 2.5-fold, and on average the resulting crystals were 1.85 μm long and 0.85 μm wide, three times the size of the crystals formed in the control lacking P20. Correspondingly, the recombinant strain that coexpressed P20 and Cry1Ac exhibited higher toxicity against Heliothis armigera larvae than the control. Furthermore, serious degradation of Cry1Ac in vivo was observed, which has seldom been reported previously. Actually, most protein was completely degraded during synthesis, and after synthesis about one-third of the expressed protoxins were degraded further before crystallization. In this process, P20 protected only nascent Cry1Ac from degradation, indicating that it acted as a molecular chaperon. In addition, spores were smaller and rounder and had a thinner exosporium layer when they were produced in the presence of P20. In summary, Cry1Ac was severely degraded during synthesis; this degradation was effectively relieved by P20, which resulted in enhanced production. Our results indicated that P20 is an effective tool for optimizing protein production in vivo.


Molecular & Cellular Proteomics | 2013

The Metabolic Regulation of Sporulation and Parasporal Crystal Formation in Bacillus thuringiensis Revealed by Transcriptomics and Proteomics

Jieping Wang; Han Mei; Cao Zheng; Hongliang Qian; Cui Cui; Yang Fu; Jianmei Su; Ziduo Liu; Ziniu Yu; Jin He

Bacillus thuringiensis is a well-known entomopathogenic bacterium used worldwide as an environmentally compatible biopesticide. During sporulation, B. thuringiensis accumulates a large number of parasporal crystals consisting of insecticidal crystal proteins (ICPs) that can account for nearly 20–30% of the cells dry weight. However, the metabolic regulation mechanisms of ICP synthesis remain to be elucidated. In this study, the combined efforts in transcriptomics and proteomics mainly uncovered the following 6 metabolic regulation mechanisms: (1) proteases and the amino acid metabolism (particularly, the branched-chain amino acids) became more active during sporulation; (2) stored poly-β-hydroxybutyrate and acetoin, together with some low-quality substances provided considerable carbon and energy sources for sporulation and parasporal crystal formation; (3) the pentose phosphate shunt demonstrated an interesting regulation mechanism involving gluconate when CT-43 cells were grown in GYS medium; (4) the tricarboxylic acid cycle was significantly modified during sporulation; (5) an obvious increase in the quantitative levels of enzymes and cytochromes involved in energy production via the electron transport system was observed; (6) most F0F1-ATPase subunits were remarkably up-regulated during sporulation. This study, for the first time, systematically reveals the metabolic regulation mechanisms involved in the supply of amino acids, carbon substances, and energy for B. thuringiensis spore and parasporal crystal formation at both the transcriptional and translational levels.


Journal of Insect Science | 2010

An Artificial Light Source Influences Mating and Oviposition of Black Soldier Flies, Hermetia illucens

Jibin Zhang; Ling Huang; Jin He; Jeffery K. Tomberlin; Jianhong Li; Chaoliang Lei; Ming Sun; Ziduo Liu; Ziniu Yu

Abstract Current methods for mass-rearing black soldier flies, Hermetia illucens (L.) (Diptera: Stratiomyidae), in the laboratory are dependent on sunlight. Quartz-iodine lamps and rare earth lamps were examined as artificial light sources for stimulating H. illucens to mate and lay eggs. Sunlight was used as the control. Adults in the quartz-iodine lamp treatment had a mating rate of 61% of those in the sunlight control. No mating occurred when the rare earth lamp was used as a substitute. Egg hatch for the quartz-iodine lamp and sunlight treatments occurred in approximately 4 days, and the hatch rate was similar between these two treatments. Larval and pupal development under these treatments required approximately 18 and 15 days at 28° C, respectively. Development of methods for mass rearing of H. illucens using artificial light will enable production of this fly throughout the year without investing in greenhouse space or requiring sunlight.


PLOS ONE | 2012

Global Effects of Catecholamines on Actinobacillus pleuropneumoniae Gene Expression

Lu Li; Zhuofei Xu; Yang Zhou; Lili Sun; Ziduo Liu; Huanchun Chen; Rui Zhou

Bacteria can use mammalian hormones to modulate pathogenic processes that play essential roles in disease development. Actinobacillus pleuropneumoniae is an important porcine respiratory pathogen causing great economic losses in the pig industry globally. Stress is known to contribute to the outcome of A. pleuropneumoniae infection. To test whether A. pleuropneumoniae could respond to stress hormone catecholamines, gene expression profiles after epinephrine (Epi) and norepinephrine (NE) treatment were compared with those from untreated bacteria. The microarray results showed that 158 and 105 genes were differentially expressed in the presence of Epi and NE, respectively. These genes were assigned to various functional categories including many virulence factors. Only 18 genes were regulated by both hormones. These genes included apxIA (the ApxI toxin structural gene), pgaB (involved in biofilm formation), APL_0443 (an autotransporter adhesin) and genes encoding potential hormone receptors such as tyrP2, the ygiY-ygiX (qseC-qseB) operon and narQ-narP (involved in nitrate metabolism). Further investigations demonstrated that cytotoxic activity was enhanced by Epi but repressed by NE in accordance with apxIA gene expression changes. Biofilm formation was not affected by either of the two hormones despite pgaB expression being affected. Adhesion to host cells was induced by NE but not by Epi, suggesting that the hormones affect other putative adhesins in addition to APL_0443. This study revealed that A. pleuropneumoniae gene expression, including those encoding virulence factors, was altered in response to both catecholamines. The differential regulation of A. pleuropneumoniae gene expression by the two hormones suggests that this pathogen may have multiple responsive systems for the two catecholamines.


Journal of Microbiology | 2010

Molecular Cloning, Purification, and Characterization of a Novel, Acidic, pH-Stable Endoglucanase from Martelella mediterranea

Junli Dong; Yuzhi Hong; Zongze Shao; Ziduo Liu

A novel gene encoding an endoglucanase designated Cel5D was cloned from a marine bacterium Martelella mediterranea by genomic library. The gene had a 1,113 bp opening reading frame encoding a 371-amino-acid protein with a molecular mass of 40,508 Da and containing a putative signal peptide (41 amino acids). Cel5D had low similarity (48–51% identity) with other known endoglucanases and consisted of one single catalytic domain, which belonged to the glycosyl hydrolase family 5. The maximum activity of Cel5D was observed at 60°C and pH 5.0. Cel5D displayed broad pH stability within the range of pH 3.0–11.0 and retained hydrolytic activity in the presence of a wide variety of metal ions and some chemical reagents. These characteristics suggest that the enzyme has considerable potential in industrial applications.


PLOS ONE | 2012

Conversion of solid organic wastes into oil via Boettcherisca peregrine (Diptera: Sarcophagidae) larvae and optimization of parameters for biodiesel production.

Sen Yang; Qing Li; Qinglan Zeng; Jibin Zhang; Ziniu Yu; Ziduo Liu

The feedstocks for biodiesel production are predominantly from edible oils and the high cost of the feedstocks prevents its large scale application. In this study, we evaluated the oil extracted from Boettcherisca peregrine larvae (BPL) grown on solid organic wastes for biodiesel production. The oil contents detected in the BPL converted from swine manure, fermentation residue and the degreased food waste, were 21.7%, 19.5% and 31.1%, respectively. The acid value of the oil is 19.02 mg KOH/g requiring a two-step transesterification process. The optimized process of 12∶1 methanol/oil (mol/mol) with 1.5% H2SO4 reacted at 70°C for 120 min resulted in a 90.8% conversion rate of free fatty acid (FFA) by esterification, and a 92.3% conversion rate of triglycerides into esters by alkaline transesterification. Properties of the BPL oil-based biodiesel are within the specifications of ASTM D6751, suggesting that the solid organic waste-grown BPL could be a feasible non-food feedstock for biodiesel production.


Bioresource Technology | 2008

Co-producing lipopeptides and poly-γ-glutamic acid by solid-state fermentation of Bacillus subtilis using soybean and sweet potato residues and its biocontrol and fertilizer synergistic effects

Qijun Wang; Shouwen Chen; Jibin Zhang; Ming Sun; Ziduo Liu; Ziniu Yu

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Ziniu Yu

Huazhong Agricultural University

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Jin He

Huazhong Agricultural University

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Jibin Zhang

Huazhong Agricultural University

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Ming Sun

Huazhong Agricultural University

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Lin Li

Huazhong Agricultural University

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Mingshun Li

Huazhong Agricultural University

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Jieping Wang

Huazhong Agricultural University

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Shouwen Chen

Huazhong Agricultural University

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Yuzhi Hong

Huazhong Agricultural University

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Huajun Zheng

Chinese National Human Genome Center

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