Hanane Boukarabila
University of Oxford
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Publication
Featured researches published by Hanane Boukarabila.
Nature | 2013
Alejandra Sanjuan-Pla; Iain C. Macaulay; Christina T. Jensen; Petter S. Woll; Tiago C. Luis; Adam Mead; Susan Hardman Moore; C Carella; S Matsuoka; T Bouriez Jones; Onima Chowdhury; L Stenson; Michael Lutteropp; Green Jca.; R Facchini; Hanane Boukarabila; Amit Grover; Adriana Gambardella; Supat Thongjuea; Joana Carrelha; P Tarrant; Debbie Atkinson; Clark S-A.; Claus Nerlov; Jacobsen Sew.
The blood system is maintained by a small pool of haematopoietic stem cells (HSCs), which are required and sufficient for replenishing all human blood cell lineages at millions of cells per second throughout life. Megakaryocytes in the bone marrow are responsible for the continuous production of platelets in the blood, crucial for preventing bleeding—a common and life-threatening side effect of many cancer therapies—and major efforts are focused at identifying the most suitable cellular and molecular targets to enhance platelet production after bone marrow transplantation or chemotherapy. Although it has become clear that distinct HSC subsets exist that are stably biased towards the generation of lymphoid or myeloid blood cells, we are yet to learn whether other types of lineage-biased HSC exist or understand their inter-relationships and how differently lineage-biased HSCs are generated and maintained. The functional relevance of notable phenotypic and molecular similarities between megakaryocytes and bone marrow cells with an HSC cell-surface phenotype remains unclear. Here we identify and prospectively isolate a molecularly and functionally distinct mouse HSC subset primed for platelet-specific gene expression, with enhanced propensity for short- and long-term reconstitution of platelets. Maintenance of platelet-biased HSCs crucially depends on thrombopoietin, the primary extrinsic regulator of platelet development. Platelet-primed HSCs also frequently have a long-term myeloid lineage bias, can self-renew and give rise to lymphoid-biased HSCs. These findings show that HSC subtypes can be organized into a cellular hierarchy, with platelet-primed HSCs at the apex. They also demonstrate that molecular and functional priming for platelet development initiates already in a distinct HSC population. The identification of a platelet-primed HSC population should enable the rational design of therapies enhancing platelet output.
Nature Immunology | 2012
Sidinh Luc; Tiago C. Luis; Hanane Boukarabila; Iain C Macaulay; Natalija Buza-Vidas; Tiphaine Bouriez-Jones; Michael Lutteropp; Petter S. Woll; Stephen Loughran; Adam Mead; Anne Hultquist; John Brown; Takuo Mizukami; S Matsuoka; Helen Ferry; Kristina Anderson; Deborah Atkinson; Shamit Soneji; Aniela Domanski; Alison Farley; Alejandra Sanjuan-Pla; Cintia Carella; Roger Patient; Marella de Bruijn; Tariq Enver; Claus Nerlov; C. Clare Blackburn; Isabelle Godin; Sten Eirik W. Jacobsen
The stepwise commitment from hematopoietic stem cells in the bone marrow to T lymphocyte–restricted progenitors in the thymus represents a paradigm for understanding the requirement for distinct extrinsic cues during different stages of lineage restriction from multipotent to lineage-restricted progenitors. However, the commitment stage at which progenitors migrate from the bone marrow to the thymus remains unclear. Here we provide functional and molecular evidence at the single-cell level that the earliest progenitors in the neonatal thymus had combined granulocyte-monocyte, T lymphocyte and B lymphocyte lineage potential but not megakaryocyte-erythroid lineage potential. These potentials were identical to those of candidate thymus-seeding progenitors in the bone marrow, which were closely related at the molecular level. Our findings establish the distinct lineage-restriction stage at which the T cell lineage–commitment process transits from the bone marrow to the remote thymus.
Immunity | 2013
Anupam Banerjee; Daniel L. Northrup; Hanane Boukarabila; Sten Erik W. Jacobsen; David Allman
Summary The mechanisms underlying the silencing of alternative fate potentials in very early B cell precursors remain unclear. Using gain- and loss-of-function approaches together with a synthetic Zinc-finger polypeptide (6ZFP) engineered to prevent transcription factor binding to a defined cis element, we show that the transcription factor EBF1 promotes B cell lineage commitment by directly repressing expression of the T-cell-lineage-requisite Gata3 gene. Ebf1-deficient lymphoid progenitors exhibited increased T cell lineage potential and elevated Gata3 transcript expression, whereas enforced EBF1 expression inhibited T cell differentiation and caused rapid loss of Gata3 mRNA. Notably, 6ZFP-mediated perturbation of EBF1 binding to a Gata3 regulatory region restored Gata3 expression, abrogated EBF1-driven suppression of T cell differentiation, and prevented B cell differentiation via a GATA3-dependent mechanism. Furthermore, EBF1 binding to Gata3 regulatory sites induced repressive histone modifications across this region. These data identify a transcriptional circuit critical for B cell lineage commitment.
Circulation Research | 2016
Jamison Leid; Joana Carrelha; Hanane Boukarabila; Slava Epelman; Sten Eirik W. Jacobsen; Kory J. Lavine
RATIONALE It is now recognized that macrophages residing within developing and adult tissues are derived from diverse progenitors including those of embryonic origin. Although the functions of macrophages in adult organisms are well studied, the functions of macrophages during organ development remain largely undefined. Moreover, it is unclear whether distinct macrophage lineages have differing functions. OBJECTIVE To address these issues, we investigated the functions of macrophage subsets resident within the developing heart, an organ replete with embryonic-derived macrophages. METHODS AND RESULTS Using a combination of flow cytometry, immunostaining, and genetic lineage tracing, we demonstrate that the developing heart contains a complex array of embryonic macrophage subsets that can be divided into chemokine (C-C motif) receptor 2(-) and chemokine (C-C motif) receptor 2(+) macrophages derived from primitive yolk sac, recombination activating gene 1(+) lymphomyeloid, and Fms-like tyrosine kinase 3(+) fetal monocyte lineages. Functionally, yolk sac-derived chemokine (C-C motif) receptor 2(-) macrophages are instrumental in coronary development where they are required for remodeling of the primitive coronary plexus. Mechanistically, chemokine (C-C motif) receptor 2(-) macrophages are recruited to coronary blood vessels at the onset of coronary perfusion where they mediate coronary plexus remodeling through selective expansion of perfused vasculature. We further demonstrate that insulin like growth factor signaling may mediate the proangiogenic properties of embryonic-derived macrophages. CONCLUSIONS Together, these findings demonstrate that the embryonic heart contains distinct lineages of embryonic macrophages with unique functions and reveal a novel mechanism that governs coronary development.
Nature | 2018
Joana Carrelha; Y Meng; L M Kettyle; Tiago C. Luis; R Norfo; V Alcolea; Hanane Boukarabila; F Grasso; Adriana Gambardella; Amit Grover; K Högstrand; A M Lord; Alejandra Sanjuan-Pla; Petter S. Woll; Claus Nerlov; Jacobsen Sew.
Rare multipotent haematopoietic stem cells (HSCs) in adult bone marrow with extensive self-renewal potential can efficiently replenish all myeloid and lymphoid blood cells, securing long-term multilineage reconstitution after physiological and clinical challenges such as chemotherapy and haematopoietic transplantations. HSC transplantation remains the only curative treatment for many haematological malignancies, but inefficient blood-lineage replenishment remains a major cause of morbidity and mortality. Single-cell transplantation has uncovered considerable heterogeneity among reconstituting HSCs, a finding that is supported by studies of unperturbed haematopoiesis and may reflect different propensities for lineage-fate decisions by distinct myeloid-, lymphoid- and platelet-biased HSCs. Other studies suggested that such lineage bias might reflect generation of unipotent or oligopotent self-renewing progenitors within the phenotypic HSC compartment, and implicated uncoupling of the defining HSC properties of self-renewal and multipotency. Here we use highly sensitive tracking of progenitors and mature cells of the megakaryocyte/platelet, erythroid, myeloid and B and T cell lineages, produced from singly transplanted HSCs, to reveal a highly organized, predictable and stable framework for lineage-restricted fates of long-term self-renewing HSCs. Most notably, a distinct class of HSCs adopts a fate towards effective and stable replenishment of a megakaryocyte/platelet-lineage tree but not of other blood cell lineages, despite sustained multipotency. No HSCs contribute exclusively to any other single blood-cell lineage. Single multipotent HSCs can also fully restrict towards simultaneous replenishment of megakaryocyte, erythroid and myeloid lineages without executing their sustained lymphoid lineage potential. Genetic lineage-tracing analysis also provides evidence for an important role of platelet-biased HSCs in unperturbed adult haematopoiesis. These findings uncover a limited repertoire of distinct HSC subsets, defined by a predictable and hierarchical propensity to adopt a fate towards replenishment of a restricted set of blood lineages, before loss of self-renewal and multipotency.
Nature Immunology | 2016
Tiago C. Luis; Sidinh Luc; Takuo Mizukami; Hanane Boukarabila; Supat Thongjuea; Petter S. Woll; Emanuele Azzoni; Alice Giustacchini; Michael Lutteropp; Tiphaine Bouriez-Jones; Harsh Vaidya; Adam Mead; Deborah Atkinson; Charlotta Böiers; Joana Carrelha; Iain C Macaulay; Roger Patient; Frederic Geissmann; Claus Nerlov; Rickard Sandberg; Marella de Bruijn; C. Clare Blackburn; Isabelle Godin; Sten Eirik W. Jacobsen
The final stages of restriction to the T cell lineage occur in the thymus after the entry of thymus-seeding progenitors (TSPs). The identity and lineage potential of TSPs remains unclear. Because the first embryonic TSPs enter a non-vascularized thymic rudiment, we were able to directly image and establish the functional and molecular properties of embryonic thymopoiesis-initiating progenitors (T-IPs) before their entry into the thymus and activation of Notch signaling. T-IPs did not include multipotent stem cells or molecular evidence of T cell–restricted progenitors. Instead, single-cell molecular and functional analysis demonstrated that most fetal T-IPs expressed genes of and had the potential to develop into lymphoid as well as myeloid components of the immune system. Moreover, studies of embryos deficient in the transcriptional regulator RBPJ demonstrated that canonical Notch signaling was not involved in pre-thymic restriction to the T cell lineage or the migration of T-IPs.
Journal of Immunology | 2018
Patricia Chaves; Alya Zriwil; Lilian Wittmann; Hanane Boukarabila; Claudia Peitzsch; Sten Eirik W. Jacobsen; Ewa Sitnicka
Within the hematopoietic system, the Notch pathway is critical for promoting thymic T cell development and suppressing the B and myeloid lineage fates; however, its impact on NK lymphopoiesis is less understood. To study the role of Notch during NK cell development in vivo, we investigated different NK cell compartments and function in Rbp-Jkfl/flVav-Cretg/+ mice, in which Rbp-Jk, the major transcriptional effector of canonical Notch signaling, was specifically deleted in all hematopoietic cells. Peripheral conventional cytotoxic NK cells in Rbp-Jk–deleted mice were significantly reduced and had an activated phenotype. Furthermore, the pool of early NK cell progenitors in the bone marrow was decreased, whereas immature NK cells were increased, leading to a block in NK cell maturation. These changes were cell intrinsic as the hematopoietic chimeras generated after transplantation of Rbp-Jk–deficient bone marrow cells had the same NK cell phenotype as the Rbp-Jk–deleted donor mice, whereas the wild-type competitors did not. The expression of several crucial NK cell regulatory pathways was significantly altered after Rbp-Jk deletion. Together, these results demonstrate the involvement of canonical Notch signaling in regulation of multiple stages of NK cell development.
Blood | 2018
Petter S. Woll; Natalija Buza-Vidas; Chin Dwl.; Hanane Boukarabila; Tiago C. Luis; L Stenson; Tiphaine Bouriez-Jones; Helen Ferry; Adam Mead; Deborah Atkinson; S Jin; Clark S-A.; B Wu; Emmanouela Repapi; Nicki Gray; Stephen Taylor; A P Mutvei; Y L Tsoi; Claus Nerlov; U Lendahl; Jacobsen Sew.
Although an essential role for canonical Notch signaling in generation of hematopoietic stem cells in the embryo and in thymic T-cell development is well established, its role in adult bone marrow (BM) myelopoiesis remains unclear. Some studies, analyzing myeloid progenitors in adult mice with inhibited Notch signaling, implicated distinct roles of canonical Notch signaling in regulation of progenitors for the megakaryocyte, erythroid, and granulocyte-macrophage cell lineages. However, these studies might also have targeted other pathways. Therefore, we specifically deleted, in adult BM, the transcription factor recombination signal-binding protein J κ (Rbpj), through which canonical signaling from all Notch receptors converges. Notably, detailed progenitor staging established that canonical Notch signaling is fully dispensable for all investigated stages of megakaryocyte, erythroid, and myeloid progenitors in steady state unperturbed hematopoiesis, after competitive BM transplantation, and in stress-induced erythropoiesis. Moreover, expression of key regulators of these hematopoietic lineages and Notch target genes were unaffected by Rbpj deficiency in BM progenitor cells.
Blood | 2011
Sidinh Luc; Iain C Macaulay; Natalija Buza-Vidas; Tiphaine Bouriez-Jones; Michael Lutteropp; Petter S. Woll; Adam Mead; Hanane Boukarabila; Tiago C. Luis; T Mizukami; S Matsuoka; John Brown; Helen Ferry; Kristina Anderson; Debbie Atkinson; Shamit Soneji; A Domanski; A Farley; Alejandra Sanjuan-Pla; C Carella; Roger Patient; M de Bruijn; Tariq Enver; Claus Nerlov; C. Clare Blackburn; Isabelle Godin; Jacobsen Sew.
Cancer Cell | 2018
C Booth; Nikolaos Barkas; Wen Hao Neo; Hanane Boukarabila; Elizabeth J. Soilleux; George Giotopoulos; Noushin Rahnamay Farnoud; Alice Giustacchini; Neil Ashley; Joana Carrelha; Lauren Jamieson; Deborah Atkinson; Tiphaine Bouriez-Jones; Rab K. Prinjha; Thomas A. Milne; David T. Teachey; Elli Papaemmanuil; Brian J. P. Huntly; Sten Eirik W. Jacobsen; Adam Mead