Hugh W. Ducklow

Distribution and composition of biogenic particulate matter in a Gulf Stream warm-core ring

Abstract We have characterized the biogenic particle field in Gulf Stream warm-core ring 82-B in June of 1982. Our observations include chlorophyll α and phaeopigments, ATP, particulate organic carbon and nitrogen, biogenic silica, total particle volume and size distribution, bacterial abundance and picoplankton biomass, and the abundances of diatoms, dinoflagellates and coccolithophorids in the upper 700 m along two transects of the ring. A distinct maximum in phytoplankton biomass occurred within the thermocline (20 to 40 m) at the rings center of rotation. This maximum had not been present in late April, and apparently developed within 3 to 4 weeks after the ring stratified in mid May. It exhibited a high degree of axial symmetry about the center of the ring, with biomass decreasing outward from ring center. A second biomass maximum associated with shelf surface water was being entrained into the anticyclonic flow field of the ring 60 to 70 km from its center. Maximum chlorophyll α and ATP concentrations observed in the two biomass maxima were similar, but the ring-center maximum was 2 to 10 times richer in particulate carbon, biogenic silica, particles > 5 μm in diameter, dinoflagellates, diatoms and estimated organic detritus, while the entrained shelf water had 2 to 5 times greater abundances of unicellular monads. Heterotrophic bacterial abundance and biomass, and the abundance of cocoid cyanobacteria were maximal in the region of highest rotational velocity 40 to 50 km from ring center. In this region the abundances of bacteria and cyanobacteria were 2 to 5 times as great as at the center of the ring. Two possible mechanisms can explain the development of an axially symmetrical maximum in biogenic particulate matter in the center of a warm-core ring: concentration by the flow field and in situ growth. Our data on the distribution and composition of biogenic material in ring 82-B indicate a greater likehood that this particular ring-center maximum developed in situ .

Bacterial growth and the decomposition of particulate organic carbon collected in sediment traps

Abstract We have studied bacterial abundance and production in samples from sediment traps deployed for 1 and 100 days in several areas of the shelf and slope regions of the Middle Atlantic Bight, U.S.A. By making a series of assumptions about bacterial growth at the expense of POC in traps, we have estimated that the turnover time of organic particles collected in traps during long deployments is slow (mean 1500 ± 300 days), if only bacterial activity is considered. However the abundance and biomass of bacteria in traps is very high, ranging from 3 to 30 × 10 11 cells gC −1 , i.e., 0.3 to 3% of the POC is bacterial carbon. Fifteen to 88% of the particles in traps were colonized by bacteria, but usually about half the particles had only 0 to 1 cell attached. Growth of bacteria was observed at all scales relevant to these trap deployments; over periods ranging from hours to weeks, at rates of 0.01 to 0.3 d −1 . In spite of slow growth, bacteria appeared to be physiologically active in that [ 3 H]adenine and [ 3 H]thymidine were incorporated more rapidly into RNA and protein than into DNA. Total incorporation rates were high. We conclude that even relatively old (ca. 1 y) POC in sediment traps supports high levels of active bacterial biomass, but that POC decomposition is slow, so that bacteria may not be the principal agents of POC turnover following collection.

More, smaller bacteria in response to ocean's warming?

Heterotrophic bacteria play a major role in organic matter cycling in the ocean. Although the high abundances and relatively fast growth rates of coastal surface bacterioplankton make them suitable sentinels of global change, past analyses have largely overlooked this functional group. Here, time series analysis of a decade of monthly observations in temperate Atlantic coastal waters revealed strong seasonal patterns in the abundance, size and biomass of the ubiquitous flow-cytometric groups of low (LNA) and high nucleic acid (HNA) content bacteria. Over this relatively short period, we also found that bacterioplankton cells were significantly smaller, a trend that is consistent with the hypothesized temperature-driven decrease in body size. Although decadal cell shrinking was observed for both groups, it was only LNA cells that were strongly coherent, with ecological theories linking temperature, abundance and individual size on both the seasonal and interannual scale. We explain this finding because, relative to their HNA counterparts, marine LNA bacteria are less diverse, dominated by members of the SAR11 clade. Temperature manipulation experiments in 2012 confirmed a direct effect of warming on bacterial size. Concurrent with rising temperatures in spring, significant decadal trends of increasing standing stocks (3% per year) accompanied by decreasing mean cell size (−1% per year) suggest a major shift in community structure, with a larger contribution of LNA bacteria to total biomass. The increasing prevalence of these typically oligotrophic taxa may severely impact marine food webs and carbon fluxes by an overall decrease in the efficiency of the biological pump.

Brackish-water aquaculture in pyrite-bearing tropical soils

Abstract Oxidation of pyrite in soils and sediments of coastal areas yields large amounts of acid, as well as soluble iron and aluminum, which seriously reduce yields of aquaculture organisms. Potential for this problem is widespread in tropical and subtropical areas, especially for brackish-water aquaculture in Southeast Asia. Data on water, sediment and soil chemistry at a new aquaculture facility in peninsular Malaysia are reported to document environmental conditions during the initial years of operation when the yields of food organisms are low. Estimated rates of leaching of acid from the pyrite-bearing dike soils suggest that acidity problems will probably persist at this facility for a number of years. Possible ways to minimize such problems are described.

Climate forcing for dynamics of dissolved inorganic nutrients at Palmer Station, Antarctica: An interdecadal (1993-2013) analysis

We analyzed 20 years (1993–2013) of observations of dissolved inorganic macronutrients (nitrate, N; phosphate, P; and silicate, Si) and chlorophyll a (Chl) at Palmer Station, Antarctica (64.8°S, 64.1°W) to elucidate how large-scale climate and local physical forcing affect the interannual variability in the seasonal phytoplankton bloom and associated drawdown of nutrients. The leading modes of nutrients (N, P, and Si empirical orthogonal functions 1, EOF1) represent overall negative anomalies throughout growing seasons, showing a mixed signal of variability in the initial levels and drawdown thereafter (low-frequency dynamics). The second most common seasonal patterns of nitrate and phosphate (N and P EOF2) capture prolonged drawdown events during December–March, which are correlated to Chl EOF1. Si EOF2 captures a drawdown event during November–December, which is correlated to Chl EOF2. These different drawdown patterns are shaped by different sets of physical and climate forcing mechanisms. N and P drawdown events during December–March are influenced by the winter and spring Southern Annular Mode (SAM) phase, where nutrient utilization is enhanced in a stabilized upper water column as a consequence of SAM-driven winter sea ice and spring wind dynamics. Si drawdown during November–December is influenced by early sea ice retreat, where ice breakup may induce abrupt water column stratification and a subsequent diatom bloom or release of diatom cells from within the sea ice. Our findings underscore that seasonal nutrient dynamics in the coastal WAP are coupled to large-scale climate forcing and related physics, understanding of which may enable improved projections of biogeochemical responses to climate change.

Modeling the spatial and temporal dynamics of foraging movements of humpback whales (Megaptera novaeangliae) in the Western Antarctic Peninsula

BackgroundA population of humpback whales (Megaptera novaeangliae) spends the austral summer feeding on Antarctic krill (Euphausia superba) along the Western Antarctic Peninsula (WAP). These whales acquire their annual energetic needs during an episodic feeding season in high latitude waters that must sustain long-distance migration and fasting on low-latitude breeding grounds. Antarctic krill are broadly distributed along the continental shelf and nearshore waters during the spring and early summer, and move closer to land during late summer and fall, where they overwinter under the protective and nutritional cover of sea ice. We apply a novel space-time utilization distribution method to test the hypothesis that humpback whale distribution reflects that of krill: spread broadly during summer with increasing proximity to shore and associated embayments during fall.ResultsHumpback whales instrumented with satellite-linked positional telemetry tags (n = 5), show decreased home range size, amount of area used, and increased proximity to shore over the foraging season.ConclusionsThis study applies a new method to model the movements of humpback whales in the WAP region throughout the feeding season, and presents a baseline for future observations of the seasonal changes in the movement patterns and foraging behavior of humpback whales (one of several krill-predators affected by climate-driven changes) in the WAP marine ecosystem. As the WAP continues to warm, it is prudent to understand the ecological relationships between sea-ice dependent krill and krill predators, as well as the interactions among recovering populations of krill predators that may be forced into competition for a shared food resource.

Ecology of bacterial communities in the schistosomiasis vector snailBiomphalaria glabrata.

The internal colony-forming bacterial flora of the schistosome intermediate host snailBiomphalaria glabrata (Say) has been characterized in ca. 500 individual snails from Puerto Rico, Guadeloupe, and St. Lucia, and from laboratory aquaria. Freshly captured wild snails harbor 2–40×106 CFU·g−1, and healthy aquarium snails harbor 4–16×107 CFU·g−1, whereas moribund individuals have 4–10 times as many bacteria as healthy individuals from the same habitats.Pseudomonas spp. are the most common predominant bacteria in normal snails, whereasAcinetobacter, Aeromonas, andMoraxella spp. predominate in moribund snails. External bacterial populations in water appear to have little effect on the composition and size of the flora in any snail. In addition to normal (healthy) and moribund snails, a third group of snails has been distinguished on the basis of internal bacterial density and predominating genera. These “high-density” snails may have undergone stresses and may harbor opportunistic pathogens. The microfloras of wild and laboratory-reared snails can be altered and stimulated to increase in density by crowding the snails or treating them with antibiotics.

A Decadal (2002–2014) Analysis for Dynamics of Heterotrophic Bacteria in an Antarctic Coastal Ecosystem: Variability and Physical and Biogeochemical Forcings

We investigated the dynamics of heterotrophic bacteria in the coastal western Antarctic Peninsula (WAP), using decadal (2002-2014) time series of two bacterial variables, bacterial production (BP) via 3H-leucine incorporation rates and bacterial biomass (BB) via bacterial abundance, collected at Palmer Antarctica Long Term Ecological Research (LTER) Station B (64.8°S, 64.1°W) over a full austral growing season (October-March). Strong seasonal and interannual variability in the degree of bacterial coupling with phytoplankton processes were observed with varying lags. On average, BP was only 4% of primary production (PP), consistent with low BP:PP ratios observed in polar waters. BP was more strongly correlated with chlorophyll (Chl), than with PP, implying that bacteria feed on DOC produced from a variety of trophic levels (e.g. zooplankton sloppy feeding and excretion) as well as directly on phytoplankton-derived DOC. The degree of bottom-up control on bacterial abundance was moderate and relatively consistent across entire growing seasons, suggesting that bacteria in the coastal WAP are under consistent DOC limitation. Temperature also influenced BP rates, though its effect was weaker than DOC. We established generalized linear models (GLMs) for monthly composites of BP and BB via stepwise regression to explore a set of physical and biogeochemical predictors. Physically, high BP and large BB were shaped by a stratified water-column, similar to forcing mechanisms favoring phytoplankton blooms, but high sea surface temperature (SST) also significantly promoted bacterial processes. High BP and large BB were influenced by high PP and bulk DOC concentrations. Based on these findings, we suggest an increasingly important role of marine heterotrophic bacteria in the coastal WAP food-web as climate change introduces a more favorable environmental setting for promoting BP, with increased DOC from retreating glaciers, a more stabilized upper water-column from ice-melt, and a baseline shift of water temperature due to more frequent delivery of warming Upper Circumpolar Deep Water (UCDW) onto the WAP shelf.