Imali Hettiarachchi

Motor Imagery Data Classification for BCI Application Using Wavelet Packet Feature Extraction

The noninvasive brain imaging modalities have provided us an extraordinary means for monitoring the working brain. Among these modalities, Electroencephalography (EEG) is the most widely used technique for measuring the brain signals under different tasks, due to its mobility, low cost, and high temporal resolution. In this paper we investigate the use of EEG signals in brain-computer interface (BCI) systems.

A marginalised Markov Chain Monte Carlo approach for model based analysis of EEG data

The work presented in this paper focuses on fitting of a neural mass model to EEG data. Neurophysiology inspired mathematical models were developed for simulating brains electrical activity imaged through Electroencephalography (EEG) more than three decades ago. At the present well informative models which even describe the functional integration of cortical regions also exists. However, a very limited amount of work is reported in literature on the subject of model fitting to actual EEG data. Here, we present a Bayesian approach for parameter estimation of the EEG model via a marginalized Markov Chain Monte Carlo (MCMC) approach.

EEG signal analysis for BCI application using fuzzy system

An approach to EEG signal classification for brain-computer interface (BCI) application using fuzzy standard additive model is introduced in this paper. The Wilcoxon test is employed to rank wavelet coefficients. Top ranking wavelets are used to form a feature set that serves as inputs to the fuzzy classifiers. Experiments are carried out using two benchmark datasets, Ia and Ib, downloaded from the BCI competition II. Prevalent classifiers including feedforward neural network, support vector machine, k-nearest neighbours, ensemble learning Adaboost and adaptive neuro-fuzzy inference system are also implemented for comparisons. Experimental results show the dominance of the proposed method against competing approaches.

A state space based approach in non-linear hemodynamic response modeling with fMRI data

In this paper we use the modified and integrated version of the balloon model in the analysis of fMRI data. We propose a new state space model realization for this balloon model and represent it with the standard A,B,C and D matrices widely used in system theory. A second order Padé approximation with equal numerator and denominator degree is used for the time delay approximation in the modeling of the cerebral blood flow. The results obtained through numerical solutions showed that the new state space model realization is in close agreement to the actual modified and integrated version of the balloon model. This new system theoretic formulation is likely to open doors to a novel way of analyzing fMRI data with real time robust estimators. With further development and validation, the new model has the potential to devise a generalized measure to make a significant contribution to improve the diagnosis and treatment of clinical scenarios where the brain functioning get altered. Concepts from system theory can readily be used in the analysis of fMRI data and the subsequent synthesis of filters and estimators.

Multiclass EEG data classification using fuzzy systems

This paper presents an approach to analysis of multiclass EEG data obtained from the brain computer interface (BCI) applications. The proposed approach comprises two stages including feature extraction using the common spatial pattern (CSP) and classification using fuzzy logic systems (FLS). CSP is used to extract significant features that are then fed into FLS as inputs for classification. The metaheuristic population-based particle swarm optimization method is used to train parameters of the FLS. The multiclass motor imagery dataset IIa from the BCI competition IV is used for experiments to highlight the superiority of the proposed approach against competing methods, which include linear discriminant analysis, naïve bayes, k-nearest neighbour, ensemble learning AdaBoost and support vector machine. Results from experiments show the great accuracy of the combination of CSP and FLS. Therefore, the proposed approach can be implemented effectively in the practical BCI systems, which would be helpful for people with impairments and rehabilitation.

Multivariate Adaptive Autoregressive Modeling and Kalman Filtering for Motor Imagery BCI

Adaptive autoregressive (AAR) modeling of the EEG time series and the AAR parameters has been widely used in Brain computer interface (BCI) systems as input features for the classification stage. Multivariate adaptive autoregressive modeling (MVAAR) also has been used in literature. This paper revisits the use of MVAAR models and propose the use of adaptive Kalman filter (AKF) for estimating the MVAAR parameters as features in a motor imagery BCI application. The AKF approach is compared to the alternative short time moving window (STMW) MVAAR parameter estimation approach. Though the two MVAAR methods show a nearly equal classification accuracy, the AKF possess the advantage of higher estimation update rates making it easily adoptable for on-line BCI systems.

Multiclass Informative Instance Transfer Learning Framework for Motor Imagery-Based Brain-Computer Interface

A widely discussed paradigm for brain-computer interface (BCI) is the motor imagery task using noninvasive electroencephalography (EEG) modality. It often requires long training session for collecting a large amount of EEG data which makes user exhausted. One of the approaches to shorten this session is utilizing the instances from past users to train the learner for the novel user. In this work, direct transferring from past users is investigated and applied to multiclass motor imagery BCI. Then, active learning (AL) driven informative instance transfer learning has been attempted for multiclass BCI. Informative instance transfer shows better performance than direct instance transfer which reaches the benchmark using a reduced amount of training data (49% less) in cases of 6 out of 9 subjects. However, none of these methods has superior performance for all subjects in general. To get a generic transfer learning framework for BCI, an optimal ensemble of informative and direct transfer methods is designed and applied. The optimized ensemble outperforms both direct and informative transfer method for all subjects except one in BCI competition IV multiclass motor imagery dataset. It achieves the benchmark performance for 8 out of 9 subjects using average 75% less training data. Thus, the requirement of large training data for the new user is reduced to a significant amount.

Application of Extended Multivariate Modeling for Information Flow Analysis of Event Related Responses

Event related potential (ERP) analysis is one of the most widely used methods in cognitive neuroscience research to study the physiological correlates of sensory, perceptual and cognitive activity associated with processing information. To this end information flow or dynamic effective connectivity analysis is a vital technique to understand the higher cognitive processing under different events. In this paper we present a Granger causality (GC)-based connectivity estimation applied to ERP data analysis. In contrast to the generally used strictly causal multivariate autoregressive model, we use an extended multivariate autoregressive model (eMVAR) which also accounts for any instantaneous interaction among variables under consideration. The experimental data used in the paper is based on a single subject data set for erroneous button press response from a two-back with feedback continuous performance task (CPT). In order to demonstrate the feasibility of application of eMVAR models in source space connectivity studies, we use cortical source time series data estimated using blind source separation or independent component analysis (ICA) for this data set.

An extended multivariate autoregressive framework for EEG-based information flow analysis of a brain network

Recently effective connectivity studies have gained significant attention among the neuroscience community as Electroencephalography (EEG) data with a high time resolution can give us a wider understanding of the information flow within the brain. Among other tools used in effective connectivity analysis Granger Causality (GC) has found a prominent place. The GC analysis, based on strictly causal multivariate autoregressive (MVAR) models does not account for the instantaneous interactions among the sources. If instantaneous interactions are present, GC based on strictly causal MVAR will lead to erroneous conclusions on the underlying information flow. Thus, the work presented in this paper applies an extended MVAR (eMVAR) model that accounts for the zero lag interactions. We propose a constrained adaptive Kalman filter (CAKF) approach for the eMVAR model identification and demonstrate that this approach performs better than the short time windowing-based adaptive estimation when applied to information flow analysis.

Identification of nonlinear fMRI models using Auxiliary Particle Filter and kernel smoothing method

Hemodynamic models have a high potential in application to understanding the functional differences of the brain. However, full system identification with respect to model fitting to actual functional magnetic resonance imaging (fMRI) data is practically difficult and is still an active area of research. We present a simulation based Bayesian approach for nonlinear model based analysis of the fMRI data. The idea is to do a joint state and parameter estimation within a general filtering framework. One advantage of using Bayesian methods is that they provide a complete description of the posterior distribution, not just a single point estimate. We use an Auxiliary Particle Filter adjoined with a kernel smoothing approach to address this joint estimation problem.