Leendert J. van den Bos
Leiden University
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Chemical Society Reviews | 2005
Jeroen D. C. Codée; Remy E. J. N. Litjens; Leendert J. van den Bos; Herman S. Overkleeft; Gijsbert A. van der Marel
This tutorial review surveys the use of thioglycosides in the development of sequential glycosylation methodologies, with a focus on chemoselective, orthogonal and iterative glycosylation strategies reported since the beginning of this century. Both fundamental aspects of glycosidic bond formation and ingenious state-of-the-art methodologies are presented.
Carbohydrate Research | 2010
Marthe T. C. Walvoort; Jasper Dinkelaar; Leendert J. van den Bos; Gerrit Lodder; Herman S. Overkleeft; Jeroen D. C. Codée; Gijsbert A. van der Marel
The search for stereoselective glycosylation reactions has occupied synthetic carbohydrate chemists for decades. Traditionally, most attention has been focused on controlling the S(N)2-like substitution of anomeric leaving groups as highlighted by Lemieuxs in situ anomerization protocol and by the discovery of anomeric triflates as reactive intermediates in the stereoselective formation of beta-mannosides. Recently, it has become clear that also S(N)1-like reaction pathways can lead to highly selective glycosylation reactions. This review describes some recent examples of stereoselective glycosylations in which oxacarbenium ions are believed to be at the basis of the selectivity. Special attention is paid to the stereodirecting effect of substituents on a pyranosyl ring with an emphasis on the role of the C-5 carboxylate ester in the condensations of mannuronate ester donors.
Journal of Organic Chemistry | 2009
Jeroen D. C. Codée; Leendert J. van den Bos; Ana-Rae de Jong; Jasper Dinkelaar; Gerrit Lodder; Herman S. Overkleeft; Gijsbert A. van der Marel
Glycosylations of mannuronate ester donors proceed highly selectively to produce the 1,2-cis-linked products. We here forward a mechanistic rationale for this counterintuitive selectivity, based on the remote stereodirecting effect of the C5-carboxylate ester, which has been demonstrated using pyranosyl uronate ester devoid of ring substituents other than the C5- carboxylate ester. It is postulated that the C5-carboxylate ester prefers to occupy an axial position in the oxacarbenium intermediate, thereby favoring the formation of the (3)H4 half-chair over the (4)H3 conformer. Nucleophilic attack on the (3)H4 half-chair intermediate occurs in a beta-fashion, providing the 1,2-cis-mannuronates with excellent stereoselectivity. The potential of the mannuronate ester donors in the formation of the beta-mannosidic linkage has been capitalized upon in the construction of a mannuronic acid alginate pentamer using a convergent orthogonal glycosylation strategy.
Chemistry: A European Journal | 2008
Jasper Dinkelaar; Leendert J. van den Bos; Wouter F. J. Hogendorf; Gerrit Lodder; Herman S. Overkleeft; Jeroen D. C. Codée; Gijsbert A. van der Marel
The glycosylation properties of gulopyranosides have been mapped out, and it is shown that gulose has an intrinsic preference for the formation of 1,2-cis-glycosidic bonds. It is postulated that this glycosylation behaviour originates from nucleophilic attack at the oxacarbenium ion, which adopts the most favourable 3H4 conformation. Building on the stereoselectivity of gulose, a guluronic acid alginate trisaccharide was assembled for the first time by using gulopyranosyl building blocks.
Journal of Organic Chemistry | 2011
Alphert E. Christina; Leendert J. van den Bos; Herman S. Overkleeft; Gijsbert A. van der Marel; Jeroen D. C. Codée
A modular approach toward the synthesis of all possible trimer repeating units of the type 1 capsular polysaccharide of Streptococcus pneumonia, Sp1, is described. This zwitterionic polysaccharide is built up from trisaccharide repeats, which in turn are composed of two galacturonic acid monomers and a 2,4,6-trideoxy-4-amino-2-acetamido-D-galactose moiety. All monomeric constituents are linked through cis-glycosidic bonds. To overcome the difficulty associated with the efficient stereoselective introduction of the α-galacturonic acid bonds, we have employed galacturonic acid-[3,6]-lactone building blocks. Not only did these building blocks perform well when used as donor galactosides, they were also shown to be reactive acceptor glycosides when equipped with a free hydroxyl function. All three frame-shifted trimer repeats were constructed via highly stereoselective glycosylation reactions, with one exception. The epimeric mixture of trisaccharides, formed in the nonselective glycosylation event, could be readily separated after global deprotection using high performance anion exchange chromatography (HPEAC).
Bioorganic & Medicinal Chemistry | 2010
Wouter F. J. Hogendorf; Leendert J. van den Bos; Herman S. Overkleeft; Jeroen D. C. Codée; Gijsbert A. van der Marel
In this paper the synthesis of an Enterococcus Faecalis teichoic acid (TA) hexamer is presented. The key kojibiosyl-glycerol phosphoramidite building block was obtained by condensation of thioglucose donors, provided with various protecting groups at the C2 hydroxyl function with an orthogonally protected glycerol acceptor. After selective deprotection, the resulting 1,2-cis-linked pseudodisaccharide acceptor was coupled to an alpha-directing thioglucose donor, giving the corresponding pseudotrisaccharide, which is then transformed to a phosphoramidite synthon. The kojibiosyl-glycerol phosphoramidite in combination with a glycerolphosphoramidite, an aminohexylphosphoramidite and dibenzylglycerol were coupled to a fully protected glycerol TA hexamer, using chemistry that can be amended for future automated synthesis. Global deprotection afforded the target hexamer kojibiosyl-glycerol containing TA (1).
Organic and Biomolecular Chemistry | 2003
Leendert J. van den Bos; Jeroen D. C. Codée; Jacques H. van Boom; Herman S. Overkleeft; Gijsbert A. van der Marel
A tethered nucleophilic substitution strategy for the stereoselective introduction of axially oriented amino functions on suitably protected gluco- and mannopyranosides is presented. The obtained oxazine is a versatile building block, which after some manipulation, could be used in the construction of highly functionalised oligosaccharides.
Journal of Carbohydrate Chemistry | 2005
Remy E. J. N. Litjens; Peter Hoogerhout; Dmitri V. Filippov; Jeroen D. C. Codée; Leendert J. van den Bos; Richard J. B. H. N. van den Berg; Herman S. Overkleeft; Gijsbert A. van der Marel
The synthesis of a neoglycoconjugate containing the Galili epitope trisaccharide connected to a spacer‐lipid entity is described. The α‐D‐Galp‐(1→3)‐β‐D‐Galp‐(1→4)‐β‐D‐GlcpNAc trisaccharide, equipped with a 3‐aminopropyl spacer, is efficiently assembled from easily accessible building blocks in a one‐pot procedure. Global deprotection of the trisaccharide and ensuing introduction of a bis(palmitamido)‐ propanamido moiety afforded title compound 1 as depicted in Scheme 1. *Dedicated to the memory of Prof. Dr. Jacques H. van Boom, our teacher, colleague, and friend.
Organic Letters | 2004
Leendert J. van den Bos; Jeroen D. C. Codée; John van der Toorn; Thomas J. Boltje; Jacques H. van Boom; and Herman S. Overkleeft; Gijsbert A. van der Marel
Tetrahedron | 2004
Jeroen D. C. Codée; Leendert J. van den Bos; Remy E. J. N. Litjens; Herman S. Overkleeft; Constant A. A. van Boeckel; Jacques H. van Boom; Gijs A. van der Marel