Mário Jorge Pereira

The effect of environmental parameters and cyanobacterial blooms on phytoplankton dynamics of a Portuguese temperate Lake

The increasing occurrence of cyanobacterial blooms in freshwaters is of great concern due to the ability of many cyanobacteria to produce cyanotoxins. In the present work, the eutrophied Vela Lake (Central Portugal), used for recreational purposes and as a water source for agriculture, was monitored every fortnight between 2000 and 2001. Phytoplankton diversity and densities were measured and correlated to environmental parameters. A seasonal phytoplanktonic succession was observed and it was mainly correlated with conductivity, temperature, total suspended solids and nutrients availability (particularly phosphorus). Diatoms were dominant during winter months (inferior temperatures and higher nutrients availability) followed by green algae in early spring and then cyanobacteria from late spring until early autumn (less nutrient availability and higher temperatures). A massive cyanobacterial bloom of Aphanizomenon flos-aquae occurred early in May 2001 and was preceded by the lowest nitrogen levels measured in the water during all the study period. At the time of this bloom senescence, dissolved oxygen was severely depleted and a massive death of ichthyofauna was recorded. A Microcystis aeruginosa bloom was also detected in July 2001 and it occurred following a rapid decrease in abundance of green algae and diatoms. By considering not only the environmental parameters but also the occurrence of cyanobacterial blooms as explanatory variables in a canonical correspondence analysis, the variance explained for the phytoplanktonic assemblage during the study period was increased in about 7% achieving a total of 61.0%, indicating a correlation that may be due to the known competitive advantage and/or allelopathy of the bloom-forming cyanobacteria towards microalgae.

Bacteriophage therapy as a bacterial control strategy in aquaculture

Aquaculture is a sector of economic relevance worldwide. Bacterial infections have been recognized as an important limitation to aquaculture production and trade. Microbial infection in aquaculture derived products has been prevented by antibiotic administration with limited success. Recently, drug-resistant bacteria have become a global problem, urging for the prompt development of alternative control strategies in order to improve food quality and safety. The alternative approach of using lytic phages or their products, as bioagents for the treatment or prophylaxis of bacterial infectious diseases, has gained interest. This review intends to emphasize the need of further research in the field of the application of phage therapy in aquaculture and highlights the use of phages in invertebrates as an antimicrobial strategy pointing critical aspects from the economic, environmental and public health perspectives.

Zooplankton distribution and dynamics in a temperate shallow estuary

The spatial, temporal and tidal dynamics of the zooplanktonic community of the Mondego estuary was studied from January 2003 to 2004. The monthly sampling procedure included the measurement of hydrological parameters (salinity, temperature, Secchi transparency, chlorophyll a and nutrients) and the collection of zooplankton with a Bongo net of 335 μm mesh size. Zooplankton composition, distribution, density, biomass and diversity were determined. The principal component analysis (PCA) revealed the existence of a spatial gradient with the upstream sampling stations, associated to high values of nutrients, in opposition to the downstream stations characterized by higher salinity and transparency values. The Copepoda was the main dominant group and Acartia tonsa revealed to be the more abundant taxon. The spatial and temporal dynamics of zooplanktonic communities analysed by non-metric MDS showed the existence of four assemblages of species-sites, reflecting differences in zooplankton composition between both branches of the estuary. The results suggest that abundance, biomass and diversity of the zooplanktonic community are strongly influenced by the hydrological circulation pattern and by direct or indirect human impacts that occur in each branch. The northern branch is dominated by the river flow suffering from regular dredging activities and the southern branch is dominated by tidal circulation suffering from an ongoing eutrophication process.

Morphological, biochemical and molecular characterization of Anabaena , Aphanizomenon and Nostoc strains (Cyanobacteria, Nostocales) isolated from Portuguese freshwater habitats

Studies of cyanobacterial nostocacean taxa are important to the global scientific community, mainly because a significant number of beneficial strains that belong to the order Nostocales fix atmospheric nitrogen, thus contributing to the fertility of agricultural soils worldwide, while others behave as nuisance microorganisms in aquatic ecosystems due to their involvement in toxic bloom events. However, in spite of their ecological importance and environmental concerns, their identification and taxonomy are still problematic and doubtful, often being based on current morphological and physiological studies, which generate confusing classification systems and usually vary under different conditions. Therefore, the present research aimed to investigate through a polyphasic approach differences in morphological, biochemical and genotypic features of three nostocacean cyanobacterial strains isolated from central-western Portuguese shallow freshwater bodies. Morphometric, genetic (16S rRNA, nifH and hetR fragments) and biochemical (fatty acid methyl ester; FAME profiles) data were used to characterize the strains. Morphological analysis and sequencing of 16S rRNA fragments showed that the strains belonged to Anabaena cylindrica (UTAD_A212), Aphanizomenon gracile (UADFA16) and Nostoc muscorum (UTAD_N213) species. These strains showed clear distinct morphological and genetic features, allowing easy allocation to their respective genera. The same happened by using partial sequences of hetR and nifH genes, in spite of the scarcity of deposited sequences. Biochemical characterization showed that the FAME profiles obtained were consistent with both morphological and molecular analyses. It was suggested that the ratio of monounsaturated to polyunsaturated FAMEs, together with the unsaturation index, could be used as genus-specific chemotaxonomic biomarkers.

Diatom ecological preferences in a shallow temperate estuary (Ria de Aveiro, Western Portugal)

The study of the diatom ecological preferences was conducted from January 2002 to June 2003 in Canal de Mira, Ria de Aveiro, Western Portugal. Three sampling stations along a salinity gradient were sampled monthly, in new moon, at high and low tide. Salinity, temperature, pH, dissolved oxygen and nutrient contents were measured for each sampling station; chlorophyll a and diatom diversity and abundance were also evaluated. Canonical correspondence analysis was used to identify the environmental variables governing the composition and structure of diatom assemblage. The variation in the species data among the different reaches was strongly determined by the salinity spatial gradient and by the temperature temporal gradient. The lower reaches were dominated by marine species (e.g. Auliscus sculptus, Chaetoceros densus, Fallacia forcipata,Licmophora flabellata, L. grandis, Surirella comis), while in the most upstream station typical freshwater species dominated (e.g. Caloneis permagna, Cymatopleura solea, Cymbella tumida, Gomphonema longiceps, Pinnularia stommatophora, Stauroneis smithii). Weighted averaging was used to estimate optima and tolerances of some diatom taxa for the most influential variables. It was possible to establish groups oftaxa with defined and distinctive salinity and temperature preferences.

A whole sample toxicity assessment to evaluate the sub-lethal toxicity of water and sediment elutriates from a lake exposed to diffuse pollution

The impact of diffuse pollution in aquatic systems is of great concern due to the difficult to measure and regulate it. As part of an ecological risk assessment (ERA), this study aims to use a whole sample toxicity assessment to evaluate the toxicity of water and sediment from Lake Vela, a lake that has been exposed to diffuse pollution. In this way, standard (algae: Pseudokirchneriella subcapitata; cladoceran: Daphnia magna) and local species (algae: Aphanizomenon flos‐aquae; cladoceran: Daphnia longispina) were exposed to surface water, and sediment elutriates were collected seasonally from two sites at Lake Vela: one near the east bank (ES), surrounded by agricultural lands; and the other near the west bank (WS), surrounded by a forest. The results confirmed the seasonal contamination of both environmental compartments by pesticides, including organochlorine pesticides, and the presence of high concentrations of nutrients. Although both sites were contaminated, higher levels of pesticides and nutrients were detected in ES, particularly in the sediments. Bioassays showed that water samples (100% concentration) collected in summer and autumn significantly affected the growth rate of P. subcapitata, which could be attributed to the presence of pesticides. Likewise, they revealed an apparent toxicity of elutriates for P. subcapitata and for both daphnids, in summer and autumn. In fact, although pesticides were not detected in elutriates, high levels of un‐ionized ammonia were recorded, which is considered highly toxic to aquatic life. By comparing the several species, P. subcapitata was revealed to be the most sensitive one, followed by the daphnids, and then by A. flos‐aquae. Results obtained in this study underlined the importance of whole samples toxicity assessment for characterizing the ecological effects of complex mixtures from diffuse inputs, in the ERA processes.

Impact of water quality on bacterioplankton assemblage along Cértima River Basin (central western Portugal) assessed by PCR–DGGE and multivariate analysis

The information on bacterial community composition (BCC) in Portuguese water bodies is very scarce. Cértima River (central western Portugal) is known to have high levels of pollution, namely organic. In the present work, the BCC from a set of 16 water samples collected from Cértima River Basin and its main tributaries was characterized using 16S rDNA–denaturing gradient gel electrophoresis, a culture-independent molecular approach. Molecular data were related to environmental parameters through multivariate analysis to investigate potential impact of water pollution along the river. Principal component analysis using environmental data showed a water quality gradient from more pristine waters (at the mountain tributaries) to waters with increasingly eutrophic potential (such as Fermentelos Lake). This gradient was mainly defined by factors such as organic and inorganic nutrient sources, electrical conductivity, hydrogen carbonate concentration, and pH. Molecular results showed variations in BCC along Cértima River Basin but in the main river section, a Bacteroidetes phylotype (Flavobacterium sp.) proved to be dominant throughout the river course. Multivariate analysis suggests that spatial variation of BCC along the Cértima River Basin depended mainly on parameters such as Chl a, total suspended solid (TSS), total organic carbon, electrical conductivity, and HCO

Reproductive biology and genetic diversity of the green turtle (Chelonia mydas) in Vamizi island, Mozambique

_{3}^{-}

Population dynamics of Acartia clausi from a temperate estuary (Mondego Estuary, Western Portugal)

levels. Bacteroidetes phylotypes were all related to higher electrical conductivity and HCO

Ecological notes on the species of Phacus Dujardin (Euglenophyta) from the central region of Portugal

_{3}^{-}