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Featured researches published by Naeim Bahrami.


Cancer Research | 2017

Assessing Prostate Cancer Aggressiveness with Hyperpolarized Dual-Agent 3D Dynamic Imaging of Metabolism and Perfusion

Hsin-Yu Chen; Peder E. Z. Larson; Robert Bok; Cornelius von Morze; Renuka Sriram; Romelyn Delos Santos; Justin Delos Santos; Jeremy W. Gordon; Naeim Bahrami; Marcus Ferrone; John Kurhanewicz; Daniel B. Vigneron

New magnetic resonance (MR) molecular imaging techniques offer the potential for noninvasive, simultaneous quantification of metabolic and perfusion parameters in tumors. This study applied a three-dimensional dynamic dual-agent hyperpolarized 13C magnetic resonance spectroscopic imaging approach with 13C-pyruvate and 13C-urea to investigate differences in perfusion and metabolism between low- and high-grade tumors in the transgenic adenocarcinoma of mouse prostate (TRAMP) transgenic mouse model of prostate cancer. Dynamic MR data were corrected for T1 relaxation and RF excitation and modeled to provide quantitative measures of pyruvate to lactate flux (kPL ) and urea perfusion (urea AUC) that correlated with TRAMP tumor histologic grade. kPL values were relatively higher for high-grade TRAMP tumors. The increase in kPL flux correlated significantly with higher lactate dehydrogenase activity and mRNA expression of Ldha, Mct1, and Mct4 as well as with more proliferative disease. There was a significant reduction in perfusion in high-grade tumors that associated with increased hypoxia and mRNA expression of Hif1α and Vegf and increased ktrans , attributed to increased blood vessel permeability. In 90% of the high-grade TRAMP tumors, a mismatch in perfusion and metabolism measurements was observed, with low perfusion being associated with increased kPL This perfusion-metabolism mismatch was also associated with metastasis. The molecular imaging approach we developed could be translated to investigate these imaging biomarkers for their diagnostic and prognostic power in future prostate cancer clinical trials. Cancer Res; 77(12); 3207-16. ©2017 AACR.


Quantitative imaging in medicine and surgery | 2014

Kinetic and perfusion modeling of hyperpolarized 13 C pyruvate and urea in cancer with arbitrary RF flip angles

Naeim Bahrami; Christine Leon Swisher; Cornelius von Morze; Daniel B. Vigneron; Peder E. Z. Larson

The accurate detection and characterization of cancerous tissue is still a major problem for the clinical management of individual cancer patients and for monitoring their response to therapy. MRI with hyperpolarized agents is a promising technique for cancer characterization because it can non-invasively provide a local assessment of the tissue metabolic profile. In this work, we measured the kinetics of hyperpolarized [1-(13)C] pyruvate and (13)C-urea in prostate and liver tumor models using a compressed sensing dynamic MRSI method. A kinetic model fitting method was developed that incorporated arbitrary RF flip angle excitation and measured a pyruvate to lactate conversion rate, Kpl, of 0.050 and 0.052 (1/s) in prostate and liver tumors, respectively, which was significantly higher than Kpl in healthy tissues [Kpl =0.028 (1/s), P<0.001]. Kpl was highly correlated to the total lactate to total pyruvate signal ratio (correlation coefficient =0.95). We additionally characterized the total pyruvate and urea perfusion, as in cancerous tissue there is both existing vasculature and neovascularization as different kinds of lesions surpass the normal blood supply, including small circulation disturbance in some of the abnormal vessels. A significantly higher perfusion of pyruvate (accounting for conversion to lactate and alanine) relative to urea perfusion was seen in cancerous tissues (liver cancer and prostate cancer) compared to healthy tissues (P<0.001), presumably due to high pyruvate uptake in tumors.


British Journal of Dermatology | 2017

Long-term adherence to topical psoriasis treatment can be abysmal: a 1-year randomized intervention study using objective electronic adherence monitoring

Hossein Alinia; S. Moradi Tuchayi; J.A. Smith; Irma Richardson; Naeim Bahrami; S.C. Jaros; Laura F. Sandoval; Michael E. Farhangian; K.L. Anderson; Karen E. Huang; Sr Feldman

Most people with psoriasis have limited disease that could be treated with topicals, but topical efficacy is limited by low short‐term adherence. Psoriasis is a chronic disease, and long‐term adherence is an even bigger problem.


international conference of the ieee engineering in medicine and biology society | 2011

Boundary delineation for hepatic hemangioma in ultrasound images

Naeim Bahrami; Seyed Hamid Rezatofighi; Aliyeh Mahdavi Adeli; S. Kamaledin Setarehdan

Hemangioma is one of the most common benign congenital complications of the human body which can arise in interior organs and external limbs. The main aim of this work is to present a new method for automatic detection of liver hemangioma and its boundaries in ultrasound images, using image processing techniques. Overall there are two phases, the preprocessing procedure and the boundary delineation phase. The preprocessing phase includes three main stages: 1. Image contrast enhancement using Difference of Offset Gaussian (DoOG) method, 2. Applying Canny edge filtering, 3. Applying an adaptive threshold in order to detect the ROI (hemangioma). Following, the snake algorithm is used to segment the hemangioma region in the second phase. For the quantitative assessment of the proposed method for the segmentation stage, the results derived via the proposed algorithms have been compared with the corresponding segmented regions determined by an expert using three similarity criteria. The results showed 73 percent similarity without pre-processing and 90 percent similarity with pre-processing.


American Journal of Neuroradiology | 2018

Edge Contrast of the FLAIR Hyperintense Region Predicts Survival in Patients with High-Grade Gliomas following Treatment with Bevacizumab

Naeim Bahrami; David Piccioni; Roshan Karunamuni; Y.-H. Chang; Nathan S. White; Rachel L. Delfanti; Tyler M. Seibert; Jona A. Hattangadi-Gluth; Anders M. Dale; Nikdokht Farid; Carrie R. McDonald

BACKGROUND AND PURPOSE: Treatment with bevacizumab is standard of care for recurrent high-grade gliomas; however, monitoring response to treatment following bevacizumab remains a challenge. The purpose of this study was to determine whether quantifying the sharpness of the fluid-attenuated inversion recovery hyperintense border using a measure derived from texture analysis—edge contrast—improves the evaluation of response to bevacizumab in patients with high-grade gliomas. MATERIALS AND METHODS: MRIs were evaluated in 33 patients with high-grade gliomas before and after the initiation of bevacizumab. Volumes of interest within the FLAIR hyperintense region were segmented. Edge contrast magnitude for each VOI was extracted using gradients of the 3D FLAIR images. Cox proportional hazards models were generated to determine the relationship between edge contrast and progression-free survival/overall survival using age and the extent of surgical resection as covariates. RESULTS: After bevacizumab, lower edge contrast of the FLAIR hyperintense region was associated with poorer progression-free survival (P = .009) and overall survival (P = .022) among patients with high-grade gliomas. Kaplan-Meier curves revealed that edge contrast cutoff significantly stratified patients for both progression-free survival (log-rank χ2 = 8.3, P = .003) and overall survival (log-rank χ2 = 5.5, P = .019). CONCLUSIONS: Texture analysis using edge contrast of the FLAIR hyperintense region may be an important predictive indicator in patients with high-grade gliomas following treatment with bevacizumab. Specifically, low FLAIR edge contrast may partially reflect areas of early tumor infiltration. This study adds to a growing body of literature proposing that quantifying features may be important for determining outcomes in patients with high-grade gliomas.


Artificial Cells Nanomedicine and Biotechnology | 2017

The effect of purmorphamine on differentiation of endometrial stem cells into osteoblast-like cells on collagen/hydroxyapatite scaffolds

Naghmeh Bahrami; Fatemeh Malekolkottab; Somayeh Ebrahimi-Barough; Zahra Alizadeh Tabari; Jalaleddin Hamisi; Ahmadreza Kamyab; Abdolreza Mohamadnia; Armin Ai; Farshad Bayat; Naeim Bahrami; Jafar Ai

Abstract We assessed the effect of purmorphamine along with collagen/hydroxyapatite scaffold in inducing osteogenesis of human endometrial stem cells (hEnSCs). The adhesion, viability, proliferation, and differentiation of cells on scaffold were assayed with SEM, MTT, real time-PCR, and ALP assay, respectively. The results were shown good integration of cells with scaffold. Also, qRT-PCR of differentiated cells shows that osteoblast cell markers are expressed after 21d in 2D and scaffold groups while in the scaffold group the expression of these markers were higher than the 2D group. Based on our findings, collagen/hydroxyapatite scaffold with PMA has the potential role in osteogenic differentiation of hEnSCs.


Epilepsia | 2018

Does bilingualism increase brain or cognitive reserve in patients with temporal lobe epilepsy

Anny Reyes; Brianna M. Paul; Anisa Marshall; Yu-Hsuan A. Chang; Naeim Bahrami; Leena Kansal; Vicente J. Iragui; Evelyn S. Tecoma; Tamar H. Gollan; Carrie R. McDonald

Bilingual healthy adults have been shown to exhibit an advantage in executive functioning (EF) that is associated with microstructural changes in white matter (WM) networks. Patients with temporal lobe epilepsy (TLE) often show EF deficits that are associated with WM compromise. In this study, we investigate whether bilingualism can increase cognitive reserve and/or brain reserve in bilingual patients with TLE, mitigating EF impairment and WM compromise.


Dermatologic Surgery | 2016

How Frequency of Electrosurgical Current and Electrode Size Affect the Depth of Electrocoagulation.

Arash Taheri; Parisa Mansoori; Naeim Bahrami; Hossein Alinia; Casey Watkins; Steven R. Feldman

BACKGROUND Many factors affect the depth of electrocoagulation. OBJECTIVE To evaluate the effect of current frequency and electrode size on the depth of electrocoagulation. METHODS AND MATERIALS In this in vitro study, 4 cylindrical electrodes (2, 2.3, 3, and 4 mm) were used to apply 3 electrosurgical currents (0.4, 1.5, and 3 MHz) to bovine liver. Each electrode was placed at different points on the surface of the liver, and energy at various levels and frequencies was delivered to the tissue. Subsequently, cross-sections of the liver were analyzed. RESULTS Coagulation started at the periphery of the electrode-tissue contact area. With higher energy levels, coagulation spreads to involve the remainder of the contact area. Neither the frequency nor the electrode size had any effect on this coagulation pattern. The frequency of the current also did not show any relation with depth of coagulation; however, there was a direct correlation between the size of the electrode and the depth of coagulation. CONCLUSION Larger-tip electrodes provided deeper coagulation compared with finer-tip electrodes.


Journal of Neuro-oncology | 2018

Molecular classification of patients with grade II/III glioma using quantitative MRI characteristics

Naeim Bahrami; Stephen J. Hartman; Yu-Hsuan Chang; Rachel L. Delfanti; Nathan S. White; Roshan Karunamuni; Tyler M. Seibert; Anders M. Dale; Jona A. Hattangadi-Gluth; David Piccioni; Nikdokht Farid; Carrie R. McDonald

BackgroundMolecular markers of WHO grade II/III glioma are known to have important prognostic and predictive implications and may be associated with unique imaging phenotypes. The purpose of this study is to determine whether three clinically relevant molecular markers identified in gliomas—IDH, 1p/19q, and MGMT status—show distinct quantitative MRI characteristics on FLAIR imaging.MethodsSixty-one patients with grade II/III gliomas who had molecular data and MRI available prior to radiation were included. Quantitative MRI features were extracted that measured tissue heterogeneity (homogeneity and pixel correlation) and FLAIR border distinctiveness (edge contrast; EC). T-tests were conducted to determine whether patients with different genotypes differ across the features. Logistic regression with LASSO regularization was used to determine the optimal combination of MRI and clinical features for predicting molecular subtypes.ResultsPatients with IDH wildtype tumors showed greater signal heterogeneity (p = 0.001) and lower EC (p = 0.008) within the FLAIR region compared to IDH mutant tumors. Among patients with IDH mutant tumors, 1p/19q co-deleted tumors had greater signal heterogeneity (p = 0.002) and lower EC (p = 0.005) compared to 1p/19q intact tumors. MGMT methylated tumors showed lower EC (p = 0.03) compared to the unmethylated group. The combination of FLAIR border distinctness, heterogeneity, and pixel correlation optimally classified tumors by IDH status.ConclusionQuantitative imaging characteristics of FLAIR heterogeneity and border pattern in grade II/III gliomas may provide unique information for determining molecular status at time of initial diagnostic imaging, which may then guide subsequent surgical and medical management.


Brain and Language | 2018

Mapping lexical-semantic networks and determining hemispheric language dominance: Do task design, sex, age, and language performance make a difference?

Yu-Hsuan A. Chang; Sogol S. Javadi; Naeim Bahrami; Vedang S. Uttarwar; Anny Reyes; Carrie R. McDonald

HighlightsBlocked and event‐related designs generated comparable language network activation.Other cognitive process may emerge due to the differences between two fMRI designs.Sex, age, and language performance did not interact with the two fMRI designs. ABSTRACT Blocked and event‐related fMRI designs are both commonly used to localize language networks and determine hemispheric dominance in research and clinical settings. We compared activation profiles on a semantic monitoring task using one of the two designs in a total of 43 healthy individual to determine whether task design or subject‐specific factors (i.e., age, sex, or language performance) influence activation patterns. We found high concordance between the two designs within core language regions, including the inferior frontal, posterior temporal, and basal temporal region. However, differences emerged within inferior parietal cortex. Subject‐specific factors did not influence activation patterns, nor did they interact with task design. These results suggest that despite high concordance within perisylvian regions that are robust to subject‐specific factors, methodological differences between blocked and event‐related designs may contribute to parietal activations. These findings provide important information for researchers incorporating fMRI results into meta‐analytic studies, as well as for clinicians using fMRI to guide pre‐surgical planning.

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Nikdokht Farid

University of California

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Ahmed Elakkad

University of Texas MD Anderson Cancer Center

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Aikaterini Kotrotsou

University of Texas MD Anderson Cancer Center

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Amy B. Heimberger

University of Texas MD Anderson Cancer Center

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Anders M. Dale

University of California

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