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Dive into the research topics where Yan-Shih Lin is active.

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Featured researches published by Yan-Shih Lin.


Tree Physiology | 2012

Temperature responses of leaf net photosynthesis: the role of component processes

Yan-Shih Lin; Belinda E. Medlyn; David S. Ellsworth

The response of photosynthesis to temperature is a central facet of plant response to climate. Such responses have been found to be highly variable among species and among studies. Understanding this variability is key when trying to predict the effects of rising global temperatures on plant productivity. There are three major factors affecting the response of leaf net photosynthesis to temperature (A(n)-T): (i) photosynthetic biochemistry, (ii) respiration and (iii) vapour pressure deficit (D) and stomatal sensitivity to vapour pressure deficit during measurements. The overall goal of our study was to quantify the relative contribution of each of these factors in determining the response of A(n) to temperature. We first conducted a sensitivity analysis with a coupled photosynthesis-stomatal (A(n)-g(s)) model, using ranges for parameters of each factor taken from the literature, and quantified how these parameters affected the A(n)-T response. Second, we applied the A(n)-g(s) model to two example sets of field data, which had different optimum temperatures (T(opt)) of A(n), to analyse which factors were most important in causing the difference. We found that each of the three factors could have an equally large effect on T(opt) of A(n). In our comparison between two field datasets, the major cause for the difference in T(opt) was not the biochemical component, but rather the differences in respiratory components and in D conditions during measurements. We concluded that shifts in A(n)-T responses are not always driven by acclimation of photosynthetic biochemistry, but can result from other factors. The D conditions during measurements and stomatal responses to D also need to be quantified if we are to better understand and predict shifts in A(n)-T with climate.


Global Change Biology | 2013

Photosynthesis of temperate Eucalyptus globulus trees outside their native range has limited adjustment to elevated CO2 and climate warming

Kristine Y. Crous; Audrey G. Quentin; Yan-Shih Lin; Belinda E. Medlyn; David G. Williams; Craig V. M. Barton; David S. Ellsworth

Eucalyptus species are grown widely outside of their native ranges in plantations on all vegetated continents of the world. We predicted that such a plantation species would show high potential for acclimation of photosynthetic traits across a wide range of growth conditions, including elevated [CO2] and climate warming. To test this prediction, we planted temperate Eucalyptus globulus Labill. seedlings in climate-controlled chambers in the field located >700 km closer to the equator than the nearest natural occurrence of this species. Trees were grown in a complete factorial combination of elevated CO2 concentration (eC; ambient [CO2] +240 ppm) and air warming treatments (eT; ambient +3 °C) for 15 months until they reached ca. 10 m height. There was little acclimation of photosynthetic capacity to eC and hence the CO2-induced photosynthetic enhancement was large (ca. 50%) in this treatment during summer. The warming treatment significantly increased rates of both carboxylation capacity (V(cmax)) and electron transport (Jmax) (measured at a common temperature of 25 °C) during winter, but decreased them significantly by 20-30% in summer. The photosynthetic CO2 compensation point in the absence of dark respiration (Γ*) was relatively less sensitive to temperature in this temperate eucalypt species than for warm-season tobacco. The temperature optima for photosynthesis and Jmax significantly changed by about 6 °C between winter and summer, but without further adjustment from early to late summer. These results suggest that there is an upper limit for the photosynthetic capacity of E. globulus ssp. globulus outside its native range to acclimate to growth temperatures above 25 °C. Limitations to temperature acclimation of photosynthesis in summer may be one factor that defines climate zones where E. globulus plantation productivity can be sustained under anticipated global environmental change.


Tree Physiology | 2013

Biochemical photosynthetic responses to temperature: how do interspecific differences compare with seasonal shifts?

Yan-Shih Lin; Belinda E. Medlyn; Martin G. De Kauwe; David S. Ellsworth

Plants show flexible acclimation of leaf photosynthesis to temperature that depends both on their prevailing growth environment and the climate where they originated. This acclimation has been shown to involve changes in the temperature responses of the apparent maximum rate of Rubisco carboxylation (Vcmax) and apparent maximum rate of electron transport (Jmax), as well as changes in the ratio of these parameters. We asked whether such changes in photosynthetic biochemistry attributable to climate of origin are similar in nature and magnitude to those attributable to growth environment. To address this question, we measured temperature responses of photosynthesis and chlorophyll fluorescence on six Eucalyptus species from diverse geographical and climatic regions growing in a common garden. Measurements were made in three seasons, allowing us to compare interspecific differences with seasonal changes. We found significant interspecific differences in apparent Vcmax and Jmax standardized to 25 °C, but there were no significant differences in the temperature responses of these parameters among species. Comparing data across seasons, we found significant seasonal changes in apparent Vcmax25, but not in Jmax25, causing a change in their ratio (J/V ratio). However, there were no seasonal changes in the temperature response of either parameter. We concluded that the growth environment had a much larger effect on temperature response than climate of origin among this set of species. Mean daytime temperature increased by 15 °C from winter to summer, whereas we estimated that the seasonal change in J/V ratio would cause a change in the optimum temperature (Topt) for gross photosynthesis of 3.6 °C. Use of a general relationship to describe photosynthetic temperature acclimation resulted in a strong underestimation of the Topt for photosynthesis for these species. Our results indicated that variation in photosynthetic temperature responses cannot be captured in one simple relationship with growth temperature. Further comparative research on species groups will be needed to develop a basis for modelling these interspecific differences in plant temperature acclimation.


New Phytologist | 2017

How do leaf and ecosystem measures of water-use efficiency compare?

Belinda E. Medlyn; Martin G. De Kauwe; Yan-Shih Lin; Jurgen Knauer; Remko A. Duursma; Christopher A. Williams; Almut Arneth; Robert Clement; Peter Isaac; Jean-Marc Limousin; Maj-Lena Linderson; Patrick Meir; Nicolas K. Martin-StPaul; Lisa Wingate

The terrestrial carbon and water cycles are intimately linked: the carbon cycle is driven by photosynthesis, while the water balance is dominated by transpiration, and both fluxes are controlled by plant stomatal conductance. The ratio between these fluxes, the plant water-use efficiency (WUE), is a useful indicator of vegetation function. WUE can be estimated using several techniques, including leaf gas exchange, stable isotope discrimination, and eddy covariance. Here we compare global compilations of data for each of these three techniques. We show that patterns of variation in WUE across plant functional types (PFTs) are not consistent among the three datasets. Key discrepancies include the following: leaf-scale data indicate differences between needleleaf and broadleaf forests, but ecosystem-scale data do not; leaf-scale data indicate differences between C3 and C4 species, whereas at ecosystem scale there is a difference between C3 and C4 crops but not grasslands; and isotope-based estimates of WUE are higher than estimates based on gas exchange for most PFTs. Our study quantifies the uncertainty associated with different methods of measuring WUE, indicates potential for bias when using WUE measures to parameterize or validate models, and indicates key research directions needed to reconcile alternative measures of WUE.


New Zealand Journal of Botany | 2017

Leaf age-related and diurnal variation in gas exchange of kauri (Agathis australis)

Cate Macinnis-Ng; Tristan Webb; Yan-Shih Lin; Luitgard Schwendenmann; Belinda E. Medlyn

ABSTRACT New Zealand kauri (Agathis australis) (D.Don) Lindl. is a large and long-lived tree species endemic to the species-rich forests of the north of the North Island. Agathis australis are culturally and ecologically significant, but little is known about their ecophysiology. In particular, environmental drivers of fluxes of carbon and water for A. australis trees have not been quantified. We measured leaf gas exchange to explore the effect of leaf age, tree size, foliar nitrogen concentration, photosynthetically active radiation (PAR) and vapour pressure deficit (D) on assimilation rates (A) and stomatal conductance (gs). We also measured carbon isotope discrimination of leaves and applied an optimal stomatal behaviour model. Both gs and A were highest for year one leaves (130 mmol m−2 s−1 and 5 μmol m−2 s−1, respectively) then declined with leaf age to < 80 mmol m−2 s−1 and < 3 μmol m−2 s−1, respectively, in 4–5-year-old leaves. Instantaneous water use efficiency (A/gs) was highly variable, but there was no leaf age-related pattern. Our diurnal results indicate that A. australis gs peaks early in the day (before 0900 h at 250 mmol m−2 s−1) and A is comparatively low, remaining below 9 μmol m−2 s−1 throughout the day. Overall, water use efficiency is low based on intrinsic water use efficiency and the stomatal model. Isotopic analysis indicated moderate water use efficiency over the life of leaves compared to other temperate conifers. This information is valuable for modelling carbon and water fluxes of A. australis and for improving our understanding of the threat of summer droughts to these forest giants.


Nature Climate Change | 2015

Optimal stomatal behaviour around the world

Yan-Shih Lin; Belinda E. Medlyn; Remko A. Duursma; I. Colin Prentice; Han Wang; Sofia Baig; Derek Eamus; Víctor Resco de Dios; Patrick J. Mitchell; David S. Ellsworth; Maarten Op de Beeck; Göran Wallin; Johan Uddling; Lasse Tarvainen; Maj-Lena Linderson; Lucas A. Cernusak; Jesse B. Nippert; Troy W. Ocheltree; David T. Tissue; Nicolas K. Martin-StPaul; Alistair Rogers; Jeff Warren; Paolo De Angelis; Kouki Hikosaka; Qingmin Han; Yusuke Onoda; Teresa E. Gimeno; Craig V. M. Barton; Jonathan Bennie; Damien Bonal


Plant Cell and Environment | 2013

Optimal stomatal conductance in relation to photosynthesis in climatically contrasting Eucalyptus species under drought.

Arnaud Heroult; Yan-Shih Lin; Aimee E. Bourne; Belinda E. Medlyn; David S. Ellsworth


Agricultural and Forest Meteorology | 2014

The peaked response of transpiration rate to vapour pressure deficit in field conditions can be explained by the temperature optimum of photosynthesis

Remko A. Duursma; Craig V. M. Barton; Yan-Shih Lin; Belinda E. Medlyn; Derek Eamus; David T. Tissue; David S. Ellsworth; Ross E. McMurtrie


Geoscientific Model Development | 2014

A Test of an optimal stomatal conductance scheme within the CABLE land surface model

M. G. De Kauwe; Jatin Kala; Yan-Shih Lin; A. J. Pitman; Belinda E. Medlyn; Remko A. Duursma; Gab Abramowitz; Ying-Ping Wang; Diego Gonzalez Miralles


New Phytologist | 2016

A Test of the 'one-point method' for estimating maximum carboxylation capacity from field-measured, light-saturated photosynthesis

Martin G. De Kauwe; Yan-Shih Lin; Ian J. Wright; Belinda E. Medlyn; Kristine Y. Crous; David S. Ellsworth; Vincent Maire; I. Colin Prentice; Owen K. Atkin; Alistair Rogers; Ülo Niinemets; Shawn P. Serbin; Patrick Meir; Johan Uddling; Henrique Furstenau Togashi; Lasse Tarvainen; Lasantha K. Weerasinghe; Bradley Evans; F. Yoko Ishida; Tomas F. Domingues

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A. J. Pitman

University of New South Wales

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Gab Abramowitz

University of New South Wales

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